RNA–Protein interactions for RNA: ENST00000583818.1

TSEN54-211, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 5

Gene TSEN54, Length 765 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-211ENST00000583818 PDGFCQ9NRA1 345 aa19.59■□□□□ 0.73
TSEN54-211ENST00000583818 PNMA2Q9UL42 364 aa19.59■□□□□ 0.73
TSEN54-211ENST00000583818 PCDHA1Q9Y5I3 950 aa19.59■□□□□ 0.73
TSEN54-211ENST00000583818 ASB14A6NK59 587 aa19.58■□□□□ 0.72
TSEN54-211ENST00000583818 COL6A1P12109 1028 aa19.58■□□□□ 0.72
TSEN54-211ENST00000583818 ADCYAP1R1P41586 468 aa19.58■□□□□ 0.72
TSEN54-211ENST00000583818 LRRC41Q15345 812 aa19.58■□□□□ 0.72
TSEN54-211ENST00000583818 SGMS1Q86VZ5 419 aa19.58■□□□□ 0.72
TSEN54-211ENST00000583818 ABHD16BQ9H3Z7 469 aa19.58■□□□□ 0.72
TSEN54-211ENST00000583818 FAM184BQ9ULE4 1060 aa19.58■□□□□ 0.72
TSEN54-211ENST00000583818 NAP1L2Q9ULW6 460 aaPredicted RBP19.58■□□□□ 0.72
TSEN54-211ENST00000583818 MRPL11Q9Y3B7 192 aaKnown RBP19.58■□□□□ 0.72
TSEN54-211ENST00000583818 MYADML2A6NDP7 307 aa19.57■□□□□ 0.72
TSEN54-211ENST00000583818 CFBP00751 764 aa19.57■□□□□ 0.72
TSEN54-211ENST00000583818 CASTP20810 708 aaKnown RBP19.57■□□□□ 0.72
TSEN54-211ENST00000583818 KIF5BP33176 963 aa19.57■□□□□ 0.72
TSEN54-211ENST00000583818 ATN1P54259 1190 aaPredicted RBP19.57■□□□□ 0.72
TSEN54-211ENST00000583818 APOA5Q6Q788 366 aa19.57■□□□□ 0.72
TSEN54-211ENST00000583818 BLOC1S2Q6QNY1 142 aa19.57■□□□□ 0.72
TSEN54-211ENST00000583818 Q6ZUG5 572 aa19.57■□□□□ 0.72
TSEN54-211ENST00000583818 SYTL5Q8TDW5 730 aaPredicted RBP19.57■□□□□ 0.72
TSEN54-211ENST00000583818 FERMT2Q96AC1 680 aa19.57■□□□□ 0.72
TSEN54-211ENST00000583818 TAAR1Q96RJ0 339 aa19.57■□□□□ 0.72
TSEN54-211ENST00000583818 MAP3K14Q99558 947 aa19.57■□□□□ 0.72
TSEN54-211ENST00000583818 ADD3Q9UEY8 706 aaKnown RBP19.57■□□□□ 0.72
TSEN54-211ENST00000583818 SYNRGQ9UMZ2 1314 aa19.56■□□□□ 0.72
TSEN54-211ENST00000583818 PNMA6FA0A0J9YX94 578 aa19.56■□□□□ 0.72
TSEN54-211ENST00000583818 KLF18A0A0U1RQI7 1052 aa19.56■□□□□ 0.72
TSEN54-211ENST00000583818 H0YGN5 161 aa19.56■□□□□ 0.72
TSEN54-211ENST00000583818 DNM1LO00429 736 aa19.56■□□□□ 0.72
TSEN54-211ENST00000583818 CAPN2P17655 700 aa19.56■□□□□ 0.72
TSEN54-211ENST00000583818 HOXA13P31271 388 aaPredicted RBP19.56■□□□□ 0.72
TSEN54-211ENST00000583818 FGD1P98174 961 aa19.56■□□□□ 0.72
TSEN54-211ENST00000583818 APOBRQ0VD83 1088 aa19.56■□□□□ 0.72
TSEN54-211ENST00000583818 FANCBQ8NB91 859 aa19.56■□□□□ 0.72
TSEN54-211ENST00000583818 ARRDC4Q8NCT1 418 aa19.56■□□□□ 0.72
TSEN54-211ENST00000583818 SPZ1Q9BXG8 430 aa19.56■□□□□ 0.72
TSEN54-211ENST00000583818 KBTBD13C9JR72 458 aa19.55■□□□□ 0.72
TSEN54-211ENST00000583818 HMGB1P09429 215 aaKnown RBP19.55■□□□□ 0.72
TSEN54-211ENST00000583818 CALM1P0DP23 149 aa19.55■□□□□ 0.72
TSEN54-211ENST00000583818 CALM2P0DP24 149 aa19.55■□□□□ 0.72
TSEN54-211ENST00000583818 CALM3P0DP25 149 aa19.55■□□□□ 0.72
TSEN54-211ENST00000583818 RPS6KB1P23443 525 aa19.55■□□□□ 0.72
TSEN54-211ENST00000583818 LRRC26Q2I0M4 334 aa19.55■□□□□ 0.72
TSEN54-211ENST00000583818 PRPF38BQ5VTL8 546 aaKnown RBP19.55■□□□□ 0.72
TSEN54-211ENST00000583818 TAPT1Q6NXT6 567 aa19.55■□□□□ 0.72
TSEN54-211ENST00000583818 TMTC3Q6ZXV5 915 aa19.55■□□□□ 0.72
TSEN54-211ENST00000583818 NOL8Q76FK4 1167 aaKnown RBP19.55■□□□□ 0.72
TSEN54-211ENST00000583818 C7orf61Q8IZ16 206 aa19.55■□□□□ 0.72
TSEN54-211ENST00000583818 RGS22Q8NE09 1264 aa19.55■□□□□ 0.72
TSEN54-211ENST00000583818 MORC4Q8TE76 937 aa19.55■□□□□ 0.72
TSEN54-211ENST00000583818 BRF1Q92994 677 aa19.55■□□□□ 0.72
TSEN54-211ENST00000583818 RRP36Q96EU6 259 aaKnown RBP19.55■□□□□ 0.72
TSEN54-211ENST00000583818 ZBTB43O43298 467 aa19.54■□□□□ 0.72
TSEN54-211ENST00000583818 EVI5O60447 810 aa19.54■□□□□ 0.72
TSEN54-211ENST00000583818 ADAMTS4O75173 837 aa19.54■□□□□ 0.72
TSEN54-211ENST00000583818 TNFAIP2Q03169 654 aa19.54■□□□□ 0.72
TSEN54-211ENST00000583818 PDE4DQ08499 809 aa19.54■□□□□ 0.72
TSEN54-211ENST00000583818 SYNE3Q6ZMZ3 975 aa19.54■□□□□ 0.72
TSEN54-211ENST00000583818 MCF2L2Q86YR7 1114 aa19.54■□□□□ 0.72
TSEN54-211ENST00000583818 GOLGA8AA7E2F4 631 aa19.53■□□□□ 0.72
TSEN54-211ENST00000583818 GOLGA8BA8MQT2 603 aa19.53■□□□□ 0.72
TSEN54-211ENST00000583818 DUSP11O75319 330 aaKnown RBP19.53■□□□□ 0.72
TSEN54-211ENST00000583818 C6orf222P0C671 652 aaPredicted RBP19.53■□□□□ 0.72
TSEN54-211ENST00000583818 SMPD1P17405 629 aa19.53■□□□□ 0.72
TSEN54-211ENST00000583818 EIF2AK2P19525 551 aaKnown RBP19.53■□□□□ 0.72
TSEN54-211ENST00000583818 GNAQP50148 359 aa19.53■□□□□ 0.72
TSEN54-211ENST00000583818 RTN1Q16799 776 aa19.53■□□□□ 0.72
TSEN54-211ENST00000583818 RMDN3Q96TC7 470 aa19.53■□□□□ 0.72
TSEN54-211ENST00000583818 LARP6Q9BRS8 491 aaKnown RBP19.53■□□□□ 0.72
TSEN54-211ENST00000583818 UPF3BQ9BZI7 483 aaKnown RBP19.53■□□□□ 0.72
TSEN54-211ENST00000583818 SEC24BO95487 1268 aa19.52■□□□□ 0.72
TSEN54-211ENST00000583818 EDNRBP24530 442 aa19.52■□□□□ 0.72
TSEN54-211ENST00000583818 CDC27P30260 824 aa19.52■□□□□ 0.72
TSEN54-211ENST00000583818 HSD17B4P51659 736 aa19.52■□□□□ 0.72
TSEN54-211ENST00000583818 BEX3Q00994 111 aa19.52■□□□□ 0.72
TSEN54-211ENST00000583818 RNF180Q86T96 592 aa19.52■□□□□ 0.72
TSEN54-211ENST00000583818 DNERQ8NFT8 737 aa19.52■□□□□ 0.72
TSEN54-211ENST00000583818 LZTS2Q9BRK4 669 aa19.52■□□□□ 0.72
TSEN54-211ENST00000583818 VTA1Q9NP79 307 aa19.52■□□□□ 0.72
TSEN54-211ENST00000583818 SEC63Q9UGP8 760 aaKnown RBP19.52■□□□□ 0.72
TSEN54-211ENST00000583818 ZMYND8Q9ULU4 1186 aaPredicted RBP19.52■□□□□ 0.72
TSEN54-211ENST00000583818 CNTNAP5Q8WYK1 1306 aa19.51■□□□□ 0.71
TSEN54-211ENST00000583818 SYN1P17600 705 aa19.51■□□□□ 0.71
TSEN54-211ENST00000583818 PSMA5P28066 241 aa19.51■□□□□ 0.71
TSEN54-211ENST00000583818 ARHGEF16Q5VV41 709 aa19.51■□□□□ 0.71
TSEN54-211ENST00000583818 FCHSD1Q86WN1 690 aa19.51■□□□□ 0.71
TSEN54-211ENST00000583818 GPKOWQ92917 476 aaPredicted RBP eCLIP19.51■□□□□ 0.71
TSEN54-211ENST00000583818 ZFP91Q96JP5 570 aaPredicted RBP19.51■□□□□ 0.71
TSEN54-211ENST00000583818 FAM217BQ9NTX9 383 aaPredicted RBP19.51■□□□□ 0.71
TSEN54-211ENST00000583818 GNEQ9Y223 722 aaKnown RBP19.51■□□□□ 0.71
TSEN54-211ENST00000583818 CTAGE5O15320 804 aa19.5■□□□□ 0.71
TSEN54-211ENST00000583818 DYNC1LI2O43237 492 aaPredicted RBP19.5■□□□□ 0.71
TSEN54-211ENST00000583818 PPFIA3O75145 1194 aa19.5■□□□□ 0.71
TSEN54-211ENST00000583818 KCNA10Q16322 511 aa19.5■□□□□ 0.71
TSEN54-211ENST00000583818 RUFY3Q7L099 469 aa19.5■□□□□ 0.71
TSEN54-211ENST00000583818 TLK2Q86UE8 772 aa19.5■□□□□ 0.71
TSEN54-211ENST00000583818 KLHDC9Q8NEP7 349 aa19.5■□□□□ 0.71
TSEN54-211ENST00000583818 NSUN6Q8TEA1 469 aaKnown RBP19.5■□□□□ 0.71
TSEN54-211ENST00000583818 COPS5Q92905 334 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms