RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 RWDD3Q9Y3V2 267 aa6.98□□□□□ -1.29
SMCHD1-208ENST00000583344 SLC12A7Q9Y666 1083 aa6.98□□□□□ -1.29
SMCHD1-208ENST00000583344 NISCHQ9Y2I1 1504 aa6.97□□□□□ -1.29
SMCHD1-208ENST00000583344 GLI4P10075 376 aa6.97□□□□□ -1.29
SMCHD1-208ENST00000583344 HDLBPQ00341 1268 aaKnown RBP6.97□□□□□ -1.29
SMCHD1-208ENST00000583344 TARBP2Q15633 366 aaKnown RBP6.97□□□□□ -1.29
SMCHD1-208ENST00000583344 EEF1DP3Q658K8 133 aa6.97□□□□□ -1.29
SMCHD1-208ENST00000583344 NT5DC4Q86YG4 428 aa6.97□□□□□ -1.29
SMCHD1-208ENST00000583344 C19orf47Q8N9M1 422 aaKnown RBP6.97□□□□□ -1.29
SMCHD1-208ENST00000583344 NLGN2Q8NFZ4 835 aa6.97□□□□□ -1.29
SMCHD1-208ENST00000583344 RASGRP4Q8TDF6 673 aa6.97□□□□□ -1.29
SMCHD1-208ENST00000583344 A0A1B0GTL3 188 aa6.96□□□□□ -1.3
SMCHD1-208ENST00000583344 NASPP49321 788 aaPredicted RBP6.96□□□□□ -1.3
SMCHD1-208ENST00000583344 FOXO4P98177 505 aa6.96□□□□□ -1.3
SMCHD1-208ENST00000583344 PPP2R5EQ16537 467 aa6.96□□□□□ -1.3
SMCHD1-208ENST00000583344 VWA3BQ502W6 1294 aa6.96□□□□□ -1.3
SMCHD1-208ENST00000583344 CPNE8Q86YQ8 564 aa6.96□□□□□ -1.3
SMCHD1-208ENST00000583344 CXorf38Q8TB03 319 aa6.96□□□□□ -1.3
SMCHD1-208ENST00000583344 SHDQ96IW2 340 aa6.96□□□□□ -1.3
SMCHD1-208ENST00000583344 SPATA32Q96LK8 384 aa6.96□□□□□ -1.3
SMCHD1-208ENST00000583344 SUSD2Q9UGT4 822 aa6.96□□□□□ -1.3
SMCHD1-208ENST00000583344 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.96□□□□□ -1.3
SMCHD1-208ENST00000583344 BACE2Q9Y5Z0 518 aa6.96□□□□□ -1.3
SMCHD1-208ENST00000583344 PPP1R11O60927 126 aaPredicted RBP6.95□□□□□ -1.3
SMCHD1-208ENST00000583344 PPM1BO75688 479 aa6.95□□□□□ -1.3
SMCHD1-208ENST00000583344 ASGR2P07307 311 aa6.95□□□□□ -1.3
SMCHD1-208ENST00000583344 SEPHS1P49903 392 aa6.95□□□□□ -1.3
SMCHD1-208ENST00000583344 AMPD2Q01433 879 aa6.95□□□□□ -1.3
SMCHD1-208ENST00000583344 SKOR2Q2VWA4 1001 aaPredicted RBP6.95□□□□□ -1.3
SMCHD1-208ENST00000583344 NLGN1Q8N2Q7 840 aa6.95□□□□□ -1.3
SMCHD1-208ENST00000583344 OR6P1Q8NGX9 317 aa6.95□□□□□ -1.3
SMCHD1-208ENST00000583344 FNIP1Q8TF40 1166 aa6.95□□□□□ -1.3
SMCHD1-208ENST00000583344 ALG3Q92685 438 aa6.95□□□□□ -1.3
SMCHD1-208ENST00000583344 GULP1Q9UBP9 304 aa6.95□□□□□ -1.3
SMCHD1-208ENST00000583344 APEX2Q9UBZ4 518 aa6.95□□□□□ -1.3
SMCHD1-208ENST00000583344 FAN1Q9Y2M0 1017 aa6.95□□□□□ -1.3
SMCHD1-208ENST00000583344 SUGT1Q9Y2Z0 365 aa6.95□□□□□ -1.3
SMCHD1-208ENST00000583344 PMF1-BGLAPU3KQ54 211 aa6.95□□□□□ -1.3
SMCHD1-208ENST00000583344 C2orf71A6NGG8 1288 aa6.94□□□□□ -1.3
SMCHD1-208ENST00000583344 PMLP29590 882 aa6.94□□□□□ -1.3
SMCHD1-208ENST00000583344 GJA8P48165 433 aa6.94□□□□□ -1.3
SMCHD1-208ENST00000583344 SLURP1P55000 103 aa6.94□□□□□ -1.3
SMCHD1-208ENST00000583344 ARHGEF39Q8N4T4 335 aa6.94□□□□□ -1.3
SMCHD1-208ENST00000583344 LZTR1Q8N653 840 aa6.94□□□□□ -1.3
SMCHD1-208ENST00000583344 FAM169BQ8N8A8 192 aa6.94□□□□□ -1.3
SMCHD1-208ENST00000583344 RNF38Q9H0F5 515 aa6.94□□□□□ -1.3
SMCHD1-208ENST00000583344 CAP1Q01518 475 aa6.93□□□□□ -1.3
SMCHD1-208ENST00000583344 GRB10Q13322 594 aa6.93□□□□□ -1.3
SMCHD1-208ENST00000583344 KIAA1211LQ6NV74 962 aa6.93□□□□□ -1.3
SMCHD1-208ENST00000583344 VHLLQ6RSH7 139 aa6.93□□□□□ -1.3
SMCHD1-208ENST00000583344 CABP7Q86V35 215 aa6.93□□□□□ -1.3
SMCHD1-208ENST00000583344 ZNF513Q8N8E2 541 aaPredicted RBP6.93□□□□□ -1.3
SMCHD1-208ENST00000583344 CPLX3Q8WVH0 158 aa6.93□□□□□ -1.3
SMCHD1-208ENST00000583344 MTA3Q9BTC8 594 aa6.93□□□□□ -1.3
SMCHD1-208ENST00000583344 NCAM1P13591 858 aa6.92□□□□□ -1.3
SMCHD1-208ENST00000583344 PAMP19021 973 aa6.92□□□□□ -1.3
SMCHD1-208ENST00000583344 KCNC1P48547 511 aa6.92□□□□□ -1.3
SMCHD1-208ENST00000583344 HTRA3P83110 453 aa6.92□□□□□ -1.3
SMCHD1-208ENST00000583344 LIPIQ6XZB0 460 aa6.92□□□□□ -1.3
SMCHD1-208ENST00000583344 ZNF526Q8TF50 670 aaPredicted RBP6.92□□□□□ -1.3
SMCHD1-208ENST00000583344 MRRFQ96E11 262 aaKnown RBP6.92□□□□□ -1.3
SMCHD1-208ENST00000583344 TSPAN17Q96FV3 270 aa6.92□□□□□ -1.3
SMCHD1-208ENST00000583344 RCC1LQ96I51 464 aaKnown RBP6.92□□□□□ -1.3
SMCHD1-208ENST00000583344 TEPSINQ96N21 525 aa6.92□□□□□ -1.3
SMCHD1-208ENST00000583344 SPATA25Q9BR10 227 aa6.92□□□□□ -1.3
SMCHD1-208ENST00000583344 NPHP3-ACAD11A0A0J9YXS1 232 aa6.91□□□□□ -1.3
SMCHD1-208ENST00000583344 CELA3BP08861 270 aa6.91□□□□□ -1.3
SMCHD1-208ENST00000583344 KRTAP10-2P60368 255 aa6.91□□□□□ -1.3
SMCHD1-208ENST00000583344 DLX2Q07687 328 aaPredicted RBP6.91□□□□□ -1.3
SMCHD1-208ENST00000583344 MBLAC2Q68D91 279 aa6.91□□□□□ -1.3
SMCHD1-208ENST00000583344 FRMD5Q7Z6J6 570 aa6.91□□□□□ -1.3
SMCHD1-208ENST00000583344 B3GNT8Q7Z7M8 397 aa6.91□□□□□ -1.3
SMCHD1-208ENST00000583344 SAPCD2Q86UD0 394 aa6.91□□□□□ -1.3
SMCHD1-208ENST00000583344 KRTAP4-5Q9BYR2 181 aa6.91□□□□□ -1.3
SMCHD1-208ENST00000583344 CLEC1BQ9P126 229 aa6.91□□□□□ -1.3
SMCHD1-208ENST00000583344 AKT3Q9Y243 479 aa6.91□□□□□ -1.3
SMCHD1-208ENST00000583344 SIT1Q9Y3P8 196 aa6.91□□□□□ -1.3
SMCHD1-208ENST00000583344 ANKRD34BA5PLL1 514 aa6.9□□□□□ -1.3
SMCHD1-208ENST00000583344 PRICKLE3O43900 615 aaPredicted RBP6.9□□□□□ -1.3
SMCHD1-208ENST00000583344 KCNH1O95259 989 aa6.9□□□□□ -1.3
SMCHD1-208ENST00000583344 WWC2Q6AWC2 1192 aa6.9□□□□□ -1.3
SMCHD1-208ENST00000583344 NETO2Q8NC67 525 aa6.9□□□□□ -1.3
SMCHD1-208ENST00000583344 SMARCC2Q8TAQ2 1214 aa6.9□□□□□ -1.3
SMCHD1-208ENST00000583344 NOX5Q96PH1 765 aa6.9□□□□□ -1.3
SMCHD1-208ENST00000583344 LGR4Q9BXB1 951 aa6.9□□□□□ -1.3
SMCHD1-208ENST00000583344 ACBD3Q9H3P7 528 aa6.9□□□□□ -1.3
SMCHD1-208ENST00000583344 KIAA1522Q9P206 1035 aaPredicted RBP6.9□□□□□ -1.3
SMCHD1-208ENST00000583344 C7orf72A4D263 438 aa6.89□□□□□ -1.31
SMCHD1-208ENST00000583344 CASP7P55210 303 aa6.89□□□□□ -1.31
SMCHD1-208ENST00000583344 SCRN1Q12765 414 aa6.89□□□□□ -1.31
SMCHD1-208ENST00000583344 RTP5Q14D33 572 aa6.89□□□□□ -1.31
SMCHD1-208ENST00000583344 NT5DC1Q5TFE4 455 aa6.89□□□□□ -1.31
SMCHD1-208ENST00000583344 PRRT2Q7Z6L0 340 aaPredicted RBP6.89□□□□□ -1.31
SMCHD1-208ENST00000583344 USP33Q8TEY7 942 aa6.89□□□□□ -1.31
SMCHD1-208ENST00000583344 ANAPC16Q96DE5 110 aa6.89□□□□□ -1.31
SMCHD1-208ENST00000583344 PEX11GQ96HA9 241 aa6.89□□□□□ -1.31
SMCHD1-208ENST00000583344 BDH2Q9BUT1 245 aa6.89□□□□□ -1.31
SMCHD1-208ENST00000583344 GPRC5CQ9NQ84 441 aa6.89□□□□□ -1.31
SMCHD1-208ENST00000583344 NUDT5Q9UKK9 219 aa6.89□□□□□ -1.31
SMCHD1-208ENST00000583344 SH3D21A4FU49 640 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms