RNA–Protein interactions for RNA: ENST00000583173.5

TSEN54-208, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 5

Gene TSEN54, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-208ENST00000583173 LIMCH1Q9UPQ0 1083 aa25.01■■□□□ 1.59
TSEN54-208ENST00000583173 CTDNEP1O95476 244 aa25■■□□□ 1.59
TSEN54-208ENST00000583173 MTFR1Q15390 333 aa25■■□□□ 1.59
TSEN54-208ENST00000583173 SLC30A10Q6XR72 485 aa25■■□□□ 1.59
TSEN54-208ENST00000583173 PHKBQ93100 1093 aa25■■□□□ 1.59
TSEN54-208ENST00000583173 TINF2Q9BSI4 451 aa25■■□□□ 1.59
TSEN54-208ENST00000583173 COL20A1Q9P218 1284 aa25■■□□□ 1.59
TSEN54-208ENST00000583173 SNAI1O95863 264 aaPredicted RBP24.99■■□□□ 1.59
TSEN54-208ENST00000583173 CYP2C19P33261 490 aa24.99■■□□□ 1.59
TSEN54-208ENST00000583173 ST3GAL1Q11201 340 aa24.99■■□□□ 1.59
TSEN54-208ENST00000583173 PFKFB3Q16875 520 aaPredicted RBP24.99■■□□□ 1.59
TSEN54-208ENST00000583173 TYW1BQ6NUM6 668 aa24.99■■□□□ 1.59
TSEN54-208ENST00000583173 MORC4Q8TE76 937 aa24.99■■□□□ 1.59
TSEN54-208ENST00000583173 RNF26Q9BY78 433 aaPredicted RBP24.99■■□□□ 1.59
TSEN54-208ENST00000583173 PTPDC1A2A3K4 754 aa24.98■■□□□ 1.59
TSEN54-208ENST00000583173 WWC2Q6AWC2 1192 aa24.98■■□□□ 1.59
TSEN54-208ENST00000583173 NECAB1Q8N987 351 aa24.98■■□□□ 1.59
TSEN54-208ENST00000583173 TRPV1Q8NER1 839 aa24.98■■□□□ 1.59
TSEN54-208ENST00000583173 GTF3C6Q969F1 213 aa24.98■■□□□ 1.59
TSEN54-208ENST00000583173 SYNGAP1Q96PV0 1343 aa24.97■■□□□ 1.59
TSEN54-208ENST00000583173 CALML3P27482 149 aa24.97■■□□□ 1.59
TSEN54-208ENST00000583173 UBXN2AP68543 259 aa24.97■■□□□ 1.59
TSEN54-208ENST00000583173 MFSD14CQ5VZR4 134 aa24.97■■□□□ 1.59
TSEN54-208ENST00000583173 NOL8Q76FK4 1167 aaKnown RBP24.97■■□□□ 1.59
TSEN54-208ENST00000583173 BARHL2Q9NY43 387 aa24.97■■□□□ 1.59
TSEN54-208ENST00000583173 RBM27Q9P2N5 1060 aaKnown RBP24.97■■□□□ 1.59
TSEN54-208ENST00000583173 BIN2Q9UBW5 565 aaPredicted RBP24.97■■□□□ 1.59
TSEN54-208ENST00000583173 LOC102724159A0A0B4J2E5 919 aa24.96■■□□□ 1.59
TSEN54-208ENST00000583173 STXBP3O00186 592 aa24.96■■□□□ 1.59
TSEN54-208ENST00000583173 PIK3CDO00329 1044 aa24.96■■□□□ 1.59
TSEN54-208ENST00000583173 MEIS2O14770 477 aa24.96■■□□□ 1.59
TSEN54-208ENST00000583173 CD2BP2O95400 341 aaKnown RBP24.96■■□□□ 1.59
TSEN54-208ENST00000583173 SCG2P13521 617 aa24.96■■□□□ 1.59
TSEN54-208ENST00000583173 PWP2Q15269 919 aaKnown RBP24.96■■□□□ 1.59
TSEN54-208ENST00000583173 PRAMEF19Q5SWL8 479 aa24.96■■□□□ 1.59
TSEN54-208ENST00000583173 DNERQ8NFT8 737 aa24.96■■□□□ 1.59
TSEN54-208ENST00000583173 GPKOWQ92917 476 aaPredicted RBP eCLIP24.96■■□□□ 1.59
TSEN54-208ENST00000583173 SHISA4Q96DD7 197 aa24.96■■□□□ 1.59
TSEN54-208ENST00000583173 TAAR1Q96RJ0 339 aa24.96■■□□□ 1.59
TSEN54-208ENST00000583173 SLC26A6Q9BXS9 759 aa24.96■■□□□ 1.59
TSEN54-208ENST00000583173 KATNBL1Q9H079 304 aa24.96■■□□□ 1.59
TSEN54-208ENST00000583173 UNC93B1Q9H1C4 597 aa24.96■■□□□ 1.59
TSEN54-208ENST00000583173 MYH6P13533 1939 aa24.96■■□□□ 1.59
TSEN54-208ENST00000583173 RPTORQ8N122 1335 aa24.95■■□□□ 1.58
TSEN54-208ENST00000583173 hCG_1984214I3L0E3 225 aa24.95■■□□□ 1.58
TSEN54-208ENST00000583173 PPFIA3O75145 1194 aa24.95■■□□□ 1.58
TSEN54-208ENST00000583173 CFBP00751 764 aa24.95■■□□□ 1.58
TSEN54-208ENST00000583173 CYBAP13498 195 aa24.95■■□□□ 1.58
TSEN54-208ENST00000583173 CCL5P13501 91 aa24.95■■□□□ 1.58
TSEN54-208ENST00000583173 PRKAR2AP13861 404 aaKnown RBP24.95■■□□□ 1.58
TSEN54-208ENST00000583173 EDNRBP24530 442 aa24.95■■□□□ 1.58
TSEN54-208ENST00000583173 ZNF713Q8N859 430 aaPredicted RBP24.95■■□□□ 1.58
TSEN54-208ENST00000583173 ZSCAN31Q96LW9 406 aaPredicted RBP24.95■■□□□ 1.58
TSEN54-208ENST00000583173 PAK6Q9NQU5 681 aaPredicted RBP24.95■■□□□ 1.58
TSEN54-208ENST00000583173 NRBP1Q9UHY1 535 aa24.95■■□□□ 1.58
TSEN54-208ENST00000583173 GCOM1H8Y6P7 765 aaPredicted RBP24.94■■□□□ 1.58
TSEN54-208ENST00000583173 CPLX1O14810 134 aa24.94■■□□□ 1.58
TSEN54-208ENST00000583173 POLR2MP0CAP2 368 aa24.94■■□□□ 1.58
TSEN54-208ENST00000583173 ZNF865P0CJ78 1059 aaPredicted RBP24.94■■□□□ 1.58
TSEN54-208ENST00000583173 ALDH5A1P51649 535 aaPredicted RBP24.94■■□□□ 1.58
TSEN54-208ENST00000583173 SSRP1Q08945 709 aaKnown RBP24.94■■□□□ 1.58
TSEN54-208ENST00000583173 HEATR3Q7Z4Q2 680 aa24.94■■□□□ 1.58
TSEN54-208ENST00000583173 ADD3Q9UEY8 706 aaKnown RBP24.94■■□□□ 1.58
TSEN54-208ENST00000583173 DDX49Q9Y6V7 483 aaKnown RBP24.94■■□□□ 1.58
TSEN54-208ENST00000583173 LCTP09848 1927 aa24.93■■□□□ 1.58
TSEN54-208ENST00000583173 ASB14A6NK59 587 aa24.93■■□□□ 1.58
TSEN54-208ENST00000583173 FDPSP14324 419 aaKnown RBP24.93■■□□□ 1.58
TSEN54-208ENST00000583173 CCND3P30281 292 aaPredicted RBP24.93■■□□□ 1.58
TSEN54-208ENST00000583173 HOXA13P31271 388 aaPredicted RBP24.93■■□□□ 1.58
TSEN54-208ENST00000583173 PPP1R18Q6NYC8 613 aa24.93■■□□□ 1.58
TSEN54-208ENST00000583173 ARMCX2Q7L311 632 aa24.93■■□□□ 1.58
TSEN54-208ENST00000583173 PSTPIP2Q9H939 334 aa24.93■■□□□ 1.58
TSEN54-208ENST00000583173 PLXNA1Q9UIW2 1896 aa24.92■■□□□ 1.58
TSEN54-208ENST00000583173 ST18O60284 1047 aa24.92■■□□□ 1.58
TSEN54-208ENST00000583173 CPLX2Q6PUV4 134 aaKnown RBP24.92■■□□□ 1.58
TSEN54-208ENST00000583173 USP17L6PQ6QN14 398 aa24.92■■□□□ 1.58
TSEN54-208ENST00000583173 TEX2Q8IWB9 1127 aa24.92■■□□□ 1.58
TSEN54-208ENST00000583173 HMX1Q9NP08 348 aaPredicted RBP24.92■■□□□ 1.58
TSEN54-208ENST00000583173 RIC8AQ9NPQ8 531 aa24.92■■□□□ 1.58
TSEN54-208ENST00000583173 CDKN2AIPQ9NXV6 580 aaPredicted RBP24.92■■□□□ 1.58
TSEN54-208ENST00000583173 DTNBO60941 627 aa24.91■■□□□ 1.58
TSEN54-208ENST00000583173 DEXIO95424 95 aa24.91■■□□□ 1.58
TSEN54-208ENST00000583173 AKAP17AQ02040 695 aaKnown RBP24.91■■□□□ 1.58
TSEN54-208ENST00000583173 LHX8Q68G74 356 aa24.91■■□□□ 1.58
TSEN54-208ENST00000583173 NSUN7Q8NE18 718 aaKnown RBP24.91■■□□□ 1.58
TSEN54-208ENST00000583173 NSUN6Q8TEA1 469 aaKnown RBP24.91■■□□□ 1.58
TSEN54-208ENST00000583173 RNF208Q9H0X6 261 aa24.91■■□□□ 1.58
TSEN54-208ENST00000583173 SH2B1Q9NRF2 756 aaPredicted RBP24.91■■□□□ 1.58
TSEN54-208ENST00000583173 STK36Q9NRP7 1315 aa24.9■■□□□ 1.58
TSEN54-208ENST00000583173 ADAMTS3O15072 1205 aa24.9■■□□□ 1.58
TSEN54-208ENST00000583173 CDKL5O76039 1030 aa24.9■■□□□ 1.58
TSEN54-208ENST00000583173 MYCP01106 439 aaPredicted RBP24.9■■□□□ 1.58
TSEN54-208ENST00000583173 GJB1P08034 283 aa24.9■■□□□ 1.58
TSEN54-208ENST00000583173 TRIM22Q8IYM9 498 aa24.9■■□□□ 1.58
TSEN54-208ENST00000583173 IWS1Q96ST2 819 aa24.9■■□□□ 1.58
TSEN54-208ENST00000583173 RMDN3Q96TC7 470 aa24.9■■□□□ 1.58
TSEN54-208ENST00000583173 ZMYND12Q9H0C1 365 aa24.9■■□□□ 1.58
TSEN54-208ENST00000583173 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.9■■□□□ 1.586e-7■■■■■ 39.8
TSEN54-208ENST00000583173 ABHD16BQ9H3Z7 469 aa24.9■■□□□ 1.58
TSEN54-208ENST00000583173 SH3GLB2Q9NR46 395 aa24.9■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms