RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	CAP2	P40123	477 aa		6.42	□□□□□ -1.38
MSI2-216	ENST00000582772	IRX5	P78411	483 aa	Predicted RBP	6.42	□□□□□ -1.38
MSI2-216	ENST00000582772	ZNF252P-AS1	Q0IIN9	211 aa		6.42	□□□□□ -1.38
MSI2-216	ENST00000582772	SERINC3	Q13530	473 aa		6.42	□□□□□ -1.38
MSI2-216	ENST00000582772	CAMK1	Q14012	370 aa		6.42	□□□□□ -1.38
MSI2-216	ENST00000582772	DCTN1	Q14203	1278 aa		6.42	□□□□□ -1.38
MSI2-216	ENST00000582772	PHLDB3	Q6NSJ2	640 aa		6.42	□□□□□ -1.38
MSI2-216	ENST00000582772	PSAPL1	Q6NUJ1	521 aa		6.42	□□□□□ -1.38
MSI2-216	ENST00000582772	POTEG	Q6S5H5	508 aa		6.42	□□□□□ -1.38
MSI2-216	ENST00000582772	MORC1	Q86VD1	984 aa		6.42	□□□□□ -1.38
MSI2-216	ENST00000582772	ATP8B4	Q8TF62	1192 aa		6.42	□□□□□ -1.38
MSI2-216	ENST00000582772	LRIG1	Q96JA1	1093 aa		6.42	□□□□□ -1.38
MSI2-216	ENST00000582772	MOV10L1	Q9BXT6	1211 aa	Known RBP	6.42	□□□□□ -1.38
MSI2-216	ENST00000582772	S1PR5	Q9H228	398 aa		6.42	□□□□□ -1.38
MSI2-216	ENST00000582772	IGFLR1	Q9H665	355 aa		6.42	□□□□□ -1.38
MSI2-216	ENST00000582772	KIAA1217	Q5T5P2	1943 aa		6.42	□□□□□ -1.38
MSI2-216	ENST00000582772	TLN1	Q9Y490	2541 aa	Known RBP	6.42	□□□□□ -1.38
MSI2-216	ENST00000582772	USP9Y	O00507	2555 aa	Predicted RBP	6.41	□□□□□ -1.38
MSI2-216	ENST00000582772	ADCY6	O43306	1168 aa		6.41	□□□□□ -1.38
MSI2-216	ENST00000582772	PARN	O95453	639 aa	Known RBP	6.41	□□□□□ -1.38
MSI2-216	ENST00000582772	TOP3B	O95985	862 aa	Known RBP	6.41	□□□□□ -1.38
MSI2-216	ENST00000582772	LINC00271	P0C7V0	271 aa		6.41	□□□□□ -1.38
MSI2-216	ENST00000582772	GPNMB	Q14956	572 aa		6.41	□□□□□ -1.38
MSI2-216	ENST00000582772	NFE2L2	Q16236	605 aa		6.41	□□□□□ -1.38
MSI2-216	ENST00000582772	COLEC12	Q5KU26	742 aa		6.41	□□□□□ -1.38
MSI2-216	ENST00000582772	MPHOSPH8	Q99549	860 aa		6.41	□□□□□ -1.38
MSI2-216	ENST00000582772	MROH8	Q9H579	483 aa		6.41	□□□□□ -1.38
MSI2-216	ENST00000582772	WNT16	Q9UBV4	365 aa		6.41	□□□□□ -1.38
MSI2-216	ENST00000582772	HCFC2	Q9Y5Z7	792 aa		6.41	□□□□□ -1.38
MSI2-216	ENST00000582772	COL5A1	P20908	1838 aa	Predicted RBP	6.41	□□□□□ -1.38
MSI2-216	ENST00000582772	KIAA1671	Q9BY89	1806 aa		6.41	□□□□□ -1.38
MSI2-216	ENST00000582772	MYH2	Q9UKX2	1941 aa		6.4	□□□□□ -1.38
MSI2-216	ENST00000582772	MGA	Q8IWI9	3026 aa		6.4	□□□□□ -1.38
MSI2-216	ENST00000582772	DDTL	A6NHG4	134 aa	Predicted RBP	6.4	□□□□□ -1.38
MSI2-216	ENST00000582772	SPDYE16	A6NNV3	312 aa	Predicted RBP	6.4	□□□□□ -1.38
MSI2-216	ENST00000582772	USP17L15	C9J2P7	530 aa		6.4	□□□□□ -1.38
MSI2-216	ENST00000582772	USP17L10	C9JJH3	530 aa		6.4	□□□□□ -1.38
MSI2-216	ENST00000582772	USP17L13	C9JLJ4	530 aa		6.4	□□□□□ -1.38
MSI2-216	ENST00000582772	USP17L11	C9JVI0	530 aa		6.4	□□□□□ -1.38
MSI2-216	ENST00000582772	USP17L18	D6R9N7	530 aa		6.4	□□□□□ -1.38
MSI2-216	ENST00000582772	USP17L22	D6RA61	530 aa		6.4	□□□□□ -1.38
MSI2-216	ENST00000582772	USP17L17	D6RBQ6	530 aa		6.4	□□□□□ -1.38
MSI2-216	ENST00000582772	USP17L19	D6RCP7	530 aa		6.4	□□□□□ -1.38
MSI2-216	ENST00000582772	USP17L20	D6RJB6	530 aa		6.4	□□□□□ -1.38
MSI2-216	ENST00000582772	LILRB3	O75022	631 aa		6.4	□□□□□ -1.38
MSI2-216	ENST00000582772	TAF5L	O75529	589 aa		6.4	□□□□□ -1.38
MSI2-216	ENST00000582772	ASGR2	P07307	311 aa		6.4	□□□□□ -1.38
MSI2-216	ENST00000582772	SLURP2	P0DP57	97 aa		6.4	□□□□□ -1.38
MSI2-216	ENST00000582772	CYP2C9	P11712	490 aa		6.4	□□□□□ -1.38
MSI2-216	ENST00000582772	NCL	P19338	710 aa	Known RBP	6.4	□□□□□ -1.38
MSI2-216	ENST00000582772	ERCC3	P19447	782 aa		6.4	□□□□□ -1.38
MSI2-216	ENST00000582772	RGS3	P49796	1198 aa		6.4	□□□□□ -1.38
MSI2-216	ENST00000582772	USP17L24	Q0WX57	530 aa		6.4	□□□□□ -1.38
MSI2-216	ENST00000582772	ZNF792	Q3KQV3	632 aa		6.4	□□□□□ -1.38
MSI2-216	ENST00000582772	CXCL17	Q6UXB2	119 aa		6.4	□□□□□ -1.38
MSI2-216	ENST00000582772	MAMDC4	Q6UXC1	1216 aa		6.4	□□□□□ -1.38
MSI2-216	ENST00000582772	TMEM184A	Q6ZMB5	413 aa		6.4	□□□□□ -1.38
MSI2-216	ENST00000582772	CATSPERG	Q6ZRH7	1159 aa		6.4	□□□□□ -1.38
MSI2-216	ENST00000582772	SLF2	Q8IX21	1173 aa		6.4	□□□□□ -1.38
MSI2-216	ENST00000582772	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	6.4	□□□□□ -1.38
MSI2-216	ENST00000582772	FAM126A	Q9BYI3	521 aa	Predicted RBP	6.4	□□□□□ -1.38
MSI2-216	ENST00000582772	EMILIN3	Q9NT22	766 aa		6.4	□□□□□ -1.38
MSI2-216	ENST00000582772	RWDD3	Q9Y3V2	267 aa		6.4	□□□□□ -1.38
MSI2-216	ENST00000582772	KRBA1	A5PL33	1030 aa		6.39	□□□□□ -1.39
MSI2-216	ENST00000582772	EIF2S2	P20042	333 aa	Known RBP	6.39	□□□□□ -1.39
MSI2-216	ENST00000582772	HIBADH	P31937	336 aa	Known RBP	6.39	□□□□□ -1.39
MSI2-216	ENST00000582772	CSRP3	P50461	194 aa		6.39	□□□□□ -1.39
MSI2-216	ENST00000582772	SNRNP48	Q6IEG0	339 aa	Known RBP	6.39	□□□□□ -1.39
MSI2-216	ENST00000582772	AFAP1L1	Q8TED9	768 aa		6.39	□□□□□ -1.39
MSI2-216	ENST00000582772	NECTIN4	Q96NY8	510 aa		6.39	□□□□□ -1.39
MSI2-216	ENST00000582772	SPATC1L	Q9H0A9	340 aa		6.39	□□□□□ -1.39
MSI2-216	ENST00000582772	GINM1	Q9NU53	330 aa		6.39	□□□□□ -1.39
MSI2-216	ENST00000582772	TRMT13	Q9NUP7	481 aa	Known RBP	6.39	□□□□□ -1.39
MSI2-216	ENST00000582772	CWC25	Q9NXE8	425 aa	Predicted RBP	6.39	□□□□□ -1.39
MSI2-216	ENST00000582772	UST	Q9Y2C2	406 aa		6.39	□□□□□ -1.39
MSI2-216	ENST00000582772	MROH7-TTC4	A0A0A0MT08	1334 aa		6.39	□□□□□ -1.39
MSI2-216	ENST00000582772	OTOG	Q6ZRI0	2925 aa		6.39	□□□□□ -1.39
MSI2-216	ENST00000582772	CACNA1F	O60840	1977 aa		6.38	□□□□□ -1.39
MSI2-216	ENST00000582772	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	6.38	□□□□□ -1.39
MSI2-216	ENST00000582772	ASNS	P08243	561 aa		6.38	□□□□□ -1.39
MSI2-216	ENST00000582772	GLUL	P15104	373 aa		6.38	□□□□□ -1.39
MSI2-216	ENST00000582772	ITGA6	P23229	1130 aa		6.38	□□□□□ -1.39
MSI2-216	ENST00000582772	PRKAR2B	P31323	418 aa		6.38	□□□□□ -1.39
MSI2-216	ENST00000582772	NOVA1	P51513	510 aa	Known RBP	6.38	□□□□□ -1.39
MSI2-216	ENST00000582772	RBL2	Q08999	1139 aa		6.38	□□□□□ -1.39
MSI2-216	ENST00000582772	BFSP2	Q13515	415 aa		6.38	□□□□□ -1.39
MSI2-216	ENST00000582772	TDG	Q13569	410 aa		6.38	□□□□□ -1.39
MSI2-216	ENST00000582772	KCNC3	Q14003	757 aa		6.38	□□□□□ -1.39
MSI2-216	ENST00000582772	ADGRD2	Q7Z7M1	963 aa		6.38	□□□□□ -1.39
MSI2-216	ENST00000582772	PLCD3	Q8N3E9	789 aa		6.38	□□□□□ -1.39
MSI2-216	ENST00000582772	RETREG2	Q8NC44	543 aa		6.38	□□□□□ -1.39
MSI2-216	ENST00000582772	HNRNPLL	Q8WVV9	542 aa	Known RBP	6.38	□□□□□ -1.39
MSI2-216	ENST00000582772	ZFP91	Q96JP5	570 aa	Predicted RBP	6.38	□□□□□ -1.39
MSI2-216	ENST00000582772	PLVAP	Q9BX97	442 aa		6.38	□□□□□ -1.39
MSI2-216	ENST00000582772	TBC1D17	Q9HA65	648 aa		6.38	□□□□□ -1.39
MSI2-216	ENST00000582772	ANKMY1	Q9P2S6	941 aa		6.38	□□□□□ -1.39
MSI2-216	ENST00000582772	FBXL21	Q9UKT6	434 aa		6.38	□□□□□ -1.39
MSI2-216	ENST00000582772	RAB23	Q9ULC3	237 aa		6.38	□□□□□ -1.39
MSI2-216	ENST00000582772	SIT1	Q9Y3P8	196 aa		6.38	□□□□□ -1.39
MSI2-216	ENST00000582772	PLXNA4	Q9HCM2	1894 aa		6.38	□□□□□ -1.39

Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms