RNA–Protein interactions for RNA: ENST00000582539.5

TRAPPC8-211, Transcript of trafficking protein particle complex 8, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC8, Length 4,391 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-211ENST00000582539 C7orf25Q9BPX7 421 aa11.3□□□□□ -0.6
TRAPPC8-211ENST00000582539 TUFT1Q9NNX1 390 aa11.3□□□□□ -0.6
TRAPPC8-211ENST00000582539 PCDHB6Q9Y5E3 794 aa11.3□□□□□ -0.6
TRAPPC8-211ENST00000582539 IRS2Q9Y4H2 1338 aa11.3□□□□□ -0.6
TRAPPC8-211ENST00000582539 SNAP23O00161 211 aa11.3□□□□□ -0.6
TRAPPC8-211ENST00000582539 CETN3O15182 167 aa11.3□□□□□ -0.6
TRAPPC8-211ENST00000582539 FAM13AO94988 1023 aa11.3□□□□□ -0.6
TRAPPC8-211ENST00000582539 OAZ1P54368 228 aa11.3□□□□□ -0.6
TRAPPC8-211ENST00000582539 ADGRA1Q86SQ6 560 aa11.3□□□□□ -0.6
TRAPPC8-211ENST00000582539 JAG2Q9Y219 1238 aa11.3□□□□□ -0.6
TRAPPC8-211ENST00000582539 MYPNQ86TC9 1320 aa11.3□□□□□ -0.6
TRAPPC8-211ENST00000582539 PITPNM2Q9BZ72 1349 aa11.3□□□□□ -0.6
TRAPPC8-211ENST00000582539 CYP2D7A0A087X1C5 515 aa11.3□□□□□ -0.6
TRAPPC8-211ENST00000582539 SPDYE2BA6NHP3 402 aa11.3□□□□□ -0.6
TRAPPC8-211ENST00000582539 ERLIN1O75477 346 aa11.3□□□□□ -0.6
TRAPPC8-211ENST00000582539 SPDYE6P0CI01 402 aa11.3□□□□□ -0.6
TRAPPC8-211ENST00000582539 NOVP48745 357 aa11.3□□□□□ -0.6
TRAPPC8-211ENST00000582539 CKAP4Q07065 602 aaKnown RBP11.3□□□□□ -0.6
TRAPPC8-211ENST00000582539 SNW1Q13573 536 aaKnown RBP11.3□□□□□ -0.6
TRAPPC8-211ENST00000582539 CYP26C1Q6V0L0 522 aa11.3□□□□□ -0.6
TRAPPC8-211ENST00000582539 OTUD6AQ7L8S5 288 aa11.3□□□□□ -0.6
TRAPPC8-211ENST00000582539 MB21D1Q8N884 522 aa11.3□□□□□ -0.6
TRAPPC8-211ENST00000582539 PANX2Q96RD6 677 aa11.3□□□□□ -0.6
TRAPPC8-211ENST00000582539 JPH2Q9BR39 696 aaPredicted RBP11.3□□□□□ -0.6
TRAPPC8-211ENST00000582539 TBC1D7Q9P0N9 293 aa11.3□□□□□ -0.6
TRAPPC8-211ENST00000582539 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.3□□□□□ -0.6
TRAPPC8-211ENST00000582539 LRRC37AA6NMS7 1700 aa11.29□□□□□ -0.6
TRAPPC8-211ENST00000582539 KIF28PB7ZC32 967 aa11.29□□□□□ -0.6
TRAPPC8-211ENST00000582539 BIN1O00499 593 aa11.29□□□□□ -0.6
TRAPPC8-211ENST00000582539 POTEJP0CG39 1038 aa11.29□□□□□ -0.6
TRAPPC8-211ENST00000582539 RASA3Q14644 834 aa11.29□□□□□ -0.6
TRAPPC8-211ENST00000582539 CEP89Q96ST8 783 aa11.29□□□□□ -0.6
TRAPPC8-211ENST00000582539 VCPKMTQ9H867 229 aa11.29□□□□□ -0.6
TRAPPC8-211ENST00000582539 PCDHB13Q9Y5F0 798 aa11.29□□□□□ -0.6
TRAPPC8-211ENST00000582539 CSADQ9Y600 493 aa11.29□□□□□ -0.6
TRAPPC8-211ENST00000582539 SFNP31947 248 aa11.29□□□□□ -0.6
TRAPPC8-211ENST00000582539 JAK3P52333 1124 aa11.29□□□□□ -0.6
TRAPPC8-211ENST00000582539 AOC3Q16853 763 aa11.29□□□□□ -0.6
TRAPPC8-211ENST00000582539 SLFNL1Q499Z3 407 aa11.29□□□□□ -0.6
TRAPPC8-211ENST00000582539 SHC4Q6S5L8 630 aa11.29□□□□□ -0.6
TRAPPC8-211ENST00000582539 LRRC47Q8N1G4 583 aaKnown RBP11.29□□□□□ -0.6
TRAPPC8-211ENST00000582539 PANK2Q9BZ23 570 aa11.29□□□□□ -0.6
TRAPPC8-211ENST00000582539 TBC1D22BQ9NU19 505 aa11.29□□□□□ -0.6
TRAPPC8-211ENST00000582539 A0A1W2PQC6 194 aa11.29□□□□□ -0.6
TRAPPC8-211ENST00000582539 TMEM232C9JQI7 657 aa11.29□□□□□ -0.6
TRAPPC8-211ENST00000582539 SSBP05455 408 aaKnown RBP eCLIP11.29□□□□□ -0.6
TRAPPC8-211ENST00000582539 KRT13P13646 458 aa11.29□□□□□ -0.6
TRAPPC8-211ENST00000582539 AKR1B1P15121 316 aa11.29□□□□□ -0.6
TRAPPC8-211ENST00000582539 EN1Q05925 392 aaPredicted RBP11.29□□□□□ -0.6
TRAPPC8-211ENST00000582539 PKN1Q16512 942 aa11.29□□□□□ -0.6
TRAPPC8-211ENST00000582539 MYOCDQ8IZQ8 938 aa11.29□□□□□ -0.6
TRAPPC8-211ENST00000582539 PRPF38AQ8NAV1 312 aaKnown RBP11.29□□□□□ -0.6
TRAPPC8-211ENST00000582539 NELFBQ8WX92 580 aa11.29□□□□□ -0.6
TRAPPC8-211ENST00000582539 ALS2CR12Q96Q35 445 aa11.29□□□□□ -0.6
TRAPPC8-211ENST00000582539 NACC1Q96RE7 527 aa11.29□□□□□ -0.6
TRAPPC8-211ENST00000582539 DEF6Q9H4E7 631 aa11.29□□□□□ -0.6
TRAPPC8-211ENST00000582539 TSKSQ9UJT2 592 aa11.29□□□□□ -0.6
TRAPPC8-211ENST00000582539 C21orf2O43822 256 aa11.28□□□□□ -0.6
TRAPPC8-211ENST00000582539 NR5A1Q13285 461 aa11.28□□□□□ -0.6
TRAPPC8-211ENST00000582539 TATDN1Q6P1N9 297 aa11.28□□□□□ -0.6
TRAPPC8-211ENST00000582539 NUP88Q99567 741 aaPredicted RBP11.28□□□□□ -0.6
TRAPPC8-211ENST00000582539 ZNF219Q9P2Y4 722 aaPredicted RBP11.28□□□□□ -0.6
TRAPPC8-211ENST00000582539 LUC7L2Q9Y383 392 aaKnown RBP11.28□□□□□ -0.6
TRAPPC8-211ENST00000582539 IGKV6D-41A0A0C4DH26 115 aa11.28□□□□□ -0.6
TRAPPC8-211ENST00000582539 EPB41P11171 864 aaKnown RBP11.28□□□□□ -0.6
TRAPPC8-211ENST00000582539 EEF2P13639 858 aaKnown RBP11.28□□□□□ -0.6
TRAPPC8-211ENST00000582539 FUT2Q10981 343 aa11.28□□□□□ -0.6
TRAPPC8-211ENST00000582539 RPGRIP1Q96KN7 1286 aa11.28□□□□□ -0.6
TRAPPC8-211ENST00000582539 SLF1Q9BQI6 1058 aa11.28□□□□□ -0.6
TRAPPC8-211ENST00000582539 PPP1R1BQ9UD71 204 aaPredicted RBP11.28□□□□□ -0.6
TRAPPC8-211ENST00000582539 TMX2Q9Y320 296 aa11.28□□□□□ -0.6
TRAPPC8-211ENST00000582539 F5H6K3 240 aa11.28□□□□□ -0.6
TRAPPC8-211ENST00000582539 HOXC6P09630 235 aa11.28□□□□□ -0.6
TRAPPC8-211ENST00000582539 KLRK1P26718 216 aa11.28□□□□□ -0.6
TRAPPC8-211ENST00000582539 KLRC3Q07444 240 aa11.28□□□□□ -0.6
TRAPPC8-211ENST00000582539 LONRF3Q496Y0 759 aa11.28□□□□□ -0.6
TRAPPC8-211ENST00000582539 CACNA2D4Q7Z3S7 1137 aa11.28□□□□□ -0.6
TRAPPC8-211ENST00000582539 GUF1Q8N442 669 aaKnown RBP11.28□□□□□ -0.6
TRAPPC8-211ENST00000582539 UNCXA6NJT0 531 aa11.28□□□□□ -0.6
TRAPPC8-211ENST00000582539 IDEP14735 1019 aa11.28□□□□□ -0.6
TRAPPC8-211ENST00000582539 SMTNP53814 917 aa11.28□□□□□ -0.6
TRAPPC8-211ENST00000582539 IQCB1Q15051 598 aa11.28□□□□□ -0.6
TRAPPC8-211ENST00000582539 KLHL10Q6JEL2 608 aa11.28□□□□□ -0.6
TRAPPC8-211ENST00000582539 APOBEC3HQ6NTF7 200 aaKnown RBP11.28□□□□□ -0.6
TRAPPC8-211ENST00000582539 KCNV1Q6PIU1 500 aa11.28□□□□□ -0.6
TRAPPC8-211ENST00000582539 ADGRF4Q8IZF3 695 aa11.28□□□□□ -0.6
TRAPPC8-211ENST00000582539 GOLPH3LQ9H4A5 285 aa11.28□□□□□ -0.6
TRAPPC8-211ENST00000582539 ADD3Q9UEY8 706 aaKnown RBP11.28□□□□□ -0.6
TRAPPC8-211ENST00000582539 BZW2Q9Y6E2 419 aaKnown RBP11.28□□□□□ -0.6
TRAPPC8-211ENST00000582539 LOC102724159A0A0B4J2E5 919 aa11.27□□□□□ -0.6
TRAPPC8-211ENST00000582539 KIAA0391O15091 583 aaKnown RBP11.27□□□□□ -0.6
TRAPPC8-211ENST00000582539 TNNT1P13805 278 aa11.27□□□□□ -0.6
TRAPPC8-211ENST00000582539 TRIM21P19474 475 aaKnown RBP11.27□□□□□ -0.6
TRAPPC8-211ENST00000582539 TXKP42681 527 aa11.27□□□□□ -0.6
TRAPPC8-211ENST00000582539 IREB2P48200 963 aaKnown RBP11.27□□□□□ -0.6
TRAPPC8-211ENST00000582539 PNOCQ13519 176 aa11.27□□□□□ -0.6
TRAPPC8-211ENST00000582539 PWP2Q15269 919 aaKnown RBP11.27□□□□□ -0.6
TRAPPC8-211ENST00000582539 CSGALNACT2Q8N6G5 542 aa11.27□□□□□ -0.6
TRAPPC8-211ENST00000582539 LMBR1Q8WVP7 490 aa11.27□□□□□ -0.6
TRAPPC8-211ENST00000582539 DCPSQ96C86 337 aaKnown RBP11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms