RNA–Protein interactions for RNA: ENST00000582513.5

TRAPPC8-210, Transcript of trafficking protein particle complex 8, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC8, Length 3,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-210ENST00000582513 TUBB4AP04350 444 aa17.13■□□□□ 0.33
TRAPPC8-210ENST00000582513 MICALCLQ6ZW33 695 aa17.13■□□□□ 0.33
TRAPPC8-210ENST00000582513 ZNF384Q8TF68 577 aa17.13■□□□□ 0.33
TRAPPC8-210ENST00000582513 RIOK1Q9BRS2 568 aaKnown RBP17.13■□□□□ 0.33
TRAPPC8-210ENST00000582513 USP17L12C9JPN9 530 aa17.12■□□□□ 0.33
TRAPPC8-210ENST00000582513 USP17L21D6R901 530 aa17.12■□□□□ 0.33
TRAPPC8-210ENST00000582513 ADAMTS3O15072 1205 aa17.12■□□□□ 0.33
TRAPPC8-210ENST00000582513 ARHGAP6O43182 974 aa17.12■□□□□ 0.33
TRAPPC8-210ENST00000582513 PHC3Q8NDX5 983 aa17.12■□□□□ 0.33
TRAPPC8-210ENST00000582513 ENOX1Q8TC92 643 aaKnown RBP17.12■□□□□ 0.33
TRAPPC8-210ENST00000582513 IQCGQ9H095 443 aaKnown RBP17.12■□□□□ 0.33
TRAPPC8-210ENST00000582513 HAUS2Q9NVX0 235 aa17.12■□□□□ 0.33
TRAPPC8-210ENST00000582513 BAZ2AQ9UIF9 1905 aaKnown RBP17.12■□□□□ 0.33
TRAPPC8-210ENST00000582513 GOLGA6L10A6NI86 522 aa17.12■□□□□ 0.33
TRAPPC8-210ENST00000582513 SPDYE3A6NKU9 549 aa17.12■□□□□ 0.33
TRAPPC8-210ENST00000582513 KRT2P35908 639 aa17.12■□□□□ 0.33
TRAPPC8-210ENST00000582513 FNTAP49354 379 aa17.12■□□□□ 0.33
TRAPPC8-210ENST00000582513 DDB1Q16531 1140 aa17.12■□□□□ 0.33
TRAPPC8-210ENST00000582513 FILIP1LQ4L180 1135 aa17.12■□□□□ 0.33
TRAPPC8-210ENST00000582513 RNF26Q9BY78 433 aaPredicted RBP17.12■□□□□ 0.33
TRAPPC8-210ENST00000582513 CEP131Q9UPN4 1083 aa17.12■□□□□ 0.33
TRAPPC8-210ENST00000582513 A0A0U1RQJ8 604 aa17.11■□□□□ 0.33
TRAPPC8-210ENST00000582513 ZSCAN9O15535 394 aaPredicted RBP17.11■□□□□ 0.33
TRAPPC8-210ENST00000582513 KCNQ2O43526 872 aa17.11■□□□□ 0.33
TRAPPC8-210ENST00000582513 IMPDH2P12268 514 aa17.11■□□□□ 0.33
TRAPPC8-210ENST00000582513 SF3A3Q12874 501 aaKnown RBP eCLIP17.11■□□□□ 0.332e-13■□□□□ 9.2
TRAPPC8-210ENST00000582513 TBX2Q13207 712 aaPredicted RBP17.11■□□□□ 0.33
TRAPPC8-210ENST00000582513 PARP10Q53GL7 1025 aa17.11■□□□□ 0.33
TRAPPC8-210ENST00000582513 CATIPQ7Z7H3 387 aa17.11■□□□□ 0.33
TRAPPC8-210ENST00000582513 BLZF1Q9H2G9 400 aa17.11■□□□□ 0.33
TRAPPC8-210ENST00000582513 ATP6V0A4Q9HBG4 840 aa17.11■□□□□ 0.33
TRAPPC8-210ENST00000582513 COL1A1P02452 1464 aaPredicted RBP17.11■□□□□ 0.33
TRAPPC8-210ENST00000582513 NT5DC1Q5TFE4 455 aa17.11■□□□□ 0.33
TRAPPC8-210ENST00000582513 NUTM2AQ8IVF1 878 aaPredicted RBP17.11■□□□□ 0.33
TRAPPC8-210ENST00000582513 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.11■□□□□ 0.338e-8■■■■■ 208.5
TRAPPC8-210ENST00000582513 TFCP2L1Q9NZI6 479 aa17.11■□□□□ 0.33
TRAPPC8-210ENST00000582513 LRP5O75197 1615 aa17.11■□□□□ 0.33
TRAPPC8-210ENST00000582513 GGCXP38435 758 aa17.11■□□□□ 0.33
TRAPPC8-210ENST00000582513 CCDC15Q0P6D6 951 aa17.11■□□□□ 0.33
TRAPPC8-210ENST00000582513 FUT2Q10981 343 aa17.11■□□□□ 0.33
TRAPPC8-210ENST00000582513 STIM1Q13586 685 aa17.11■□□□□ 0.33
TRAPPC8-210ENST00000582513 CDCA2Q69YH5 1023 aaPredicted RBP17.11■□□□□ 0.33
TRAPPC8-210ENST00000582513 CYB5D1Q6P9G0 228 aa17.11■□□□□ 0.33
TRAPPC8-210ENST00000582513 CCDC121Q6ZUS5 278 aa17.11■□□□□ 0.33
TRAPPC8-210ENST00000582513 HOOK3Q86VS8 718 aa17.11■□□□□ 0.33
TRAPPC8-210ENST00000582513 FAM114A1Q8IWE2 563 aa17.11■□□□□ 0.33
TRAPPC8-210ENST00000582513 STAMBPL1Q96FJ0 436 aa17.11■□□□□ 0.33
TRAPPC8-210ENST00000582513 ANKZF1Q9H8Y5 726 aa17.11■□□□□ 0.33
TRAPPC8-210ENST00000582513 SOWAHDA6NJG2 315 aa17.1■□□□□ 0.33
TRAPPC8-210ENST00000582513 CYP2D6P10635 497 aa17.1■□□□□ 0.33
TRAPPC8-210ENST00000582513 XBP1P17861 261 aa17.1■□□□□ 0.33
TRAPPC8-210ENST00000582513 SLC8A1P32418 973 aa17.1■□□□□ 0.33
TRAPPC8-210ENST00000582513 ZNF579Q8NAF0 562 aaKnown RBP17.1■□□□□ 0.33
TRAPPC8-210ENST00000582513 CELF1Q92879 486 aaKnown RBP17.1■□□□□ 0.33
TRAPPC8-210ENST00000582513 PAGE5Q96GU1 130 aa17.1■□□□□ 0.33
TRAPPC8-210ENST00000582513 CDC5LQ99459 802 aaKnown RBP17.1■□□□□ 0.33
TRAPPC8-210ENST00000582513 AATFQ9NY61 560 aaKnown RBP eCLIP17.1■□□□□ 0.33
TRAPPC8-210ENST00000582513 DACH1Q9UI36 760 aa17.1■□□□□ 0.33
TRAPPC8-210ENST00000582513 DOCK2Q92608 1830 aa17.1■□□□□ 0.33
TRAPPC8-210ENST00000582513 NAT1P18440 290 aa17.1■□□□□ 0.33
TRAPPC8-210ENST00000582513 CDC25AP30304 524 aa17.1■□□□□ 0.33
TRAPPC8-210ENST00000582513 PLCD1P51178 756 aa17.1■□□□□ 0.33
TRAPPC8-210ENST00000582513 SMTNP53814 917 aa17.1■□□□□ 0.33
TRAPPC8-210ENST00000582513 POLE2P56282 527 aa17.1■□□□□ 0.33
TRAPPC8-210ENST00000582513 PHF20Q9BVI0 1012 aa17.1■□□□□ 0.33
TRAPPC8-210ENST00000582513 MTMR7Q9Y216 660 aa17.1■□□□□ 0.33
TRAPPC8-210ENST00000582513 NID2Q14112 1375 aa17.1■□□□□ 0.33
TRAPPC8-210ENST00000582513 OPLAHO14841 1288 aa17.09■□□□□ 0.33
TRAPPC8-210ENST00000582513 SLC8A3P57103 927 aa17.09■□□□□ 0.33
TRAPPC8-210ENST00000582513 SRGAP1Q7Z6B7 1085 aa17.09■□□□□ 0.33
TRAPPC8-210ENST00000582513 MARCH10Q8NA82 808 aaPredicted RBP17.09■□□□□ 0.33
TRAPPC8-210ENST00000582513 OR8K1Q8NGG5 319 aa17.09■□□□□ 0.33
TRAPPC8-210ENST00000582513 MYO1AQ9UBC5 1043 aa17.09■□□□□ 0.33
TRAPPC8-210ENST00000582513 TRPC6Q9Y210 931 aa17.09■□□□□ 0.33
TRAPPC8-210ENST00000582513 RTL9Q8NET4 1388 aa17.09■□□□□ 0.33
TRAPPC8-210ENST00000582513 MYH6P13533 1939 aa17.09■□□□□ 0.33
TRAPPC8-210ENST00000582513 POTEB2H3BUK9 544 aa17.09■□□□□ 0.33
TRAPPC8-210ENST00000582513 TROAPQ12815 778 aa17.09■□□□□ 0.33
TRAPPC8-210ENST00000582513 PTGDRQ13258 359 aa17.09■□□□□ 0.33
TRAPPC8-210ENST00000582513 MPP3Q13368 585 aa17.09■□□□□ 0.33
TRAPPC8-210ENST00000582513 BZW1Q7L1Q6 419 aaKnown RBP17.09■□□□□ 0.33
TRAPPC8-210ENST00000582513 TAX1BP1Q86VP1 789 aa17.09■□□□□ 0.33
TRAPPC8-210ENST00000582513 TCP11Q8WWU5 503 aa17.09■□□□□ 0.33
TRAPPC8-210ENST00000582513 FSBPO95073 299 aa17.09■□□□□ 0.33
TRAPPC8-210ENST00000582513 PIK3AP1Q6ZUJ8 805 aa17.09■□□□□ 0.33
TRAPPC8-210ENST00000582513 TMEM110Q86TL2 294 aa17.09■□□□□ 0.33
TRAPPC8-210ENST00000582513 PNMA8AQ86V59 439 aaPredicted RBP17.09■□□□□ 0.33
TRAPPC8-210ENST00000582513 FAM84BQ96KN1 310 aaPredicted RBP17.09■□□□□ 0.33
TRAPPC8-210ENST00000582513 MRPL44Q9H9J2 332 aaKnown RBP17.09■□□□□ 0.33
TRAPPC8-210ENST00000582513 MYH14Q7Z406 1995 aaKnown RBP17.08■□□□□ 0.33
TRAPPC8-210ENST00000582513 KCNA4P22459 653 aa17.08■□□□□ 0.33
TRAPPC8-210ENST00000582513 MCM7P33993 719 aa17.08■□□□□ 0.33
TRAPPC8-210ENST00000582513 CCT6AP40227 531 aaKnown RBP17.08■□□□□ 0.33
TRAPPC8-210ENST00000582513 DPYDQ12882 1025 aa17.08■□□□□ 0.33
TRAPPC8-210ENST00000582513 NR1I3Q14994 352 aa17.08■□□□□ 0.33
TRAPPC8-210ENST00000582513 CAVIN4Q5BKX8 364 aa17.08■□□□□ 0.33
TRAPPC8-210ENST00000582513 SRBD1Q8N5C6 995 aaKnown RBP17.08■□□□□ 0.33
TRAPPC8-210ENST00000582513 MSL3Q8N5Y2 521 aaKnown RBP17.08■□□□□ 0.33
TRAPPC8-210ENST00000582513 TRIM58Q8NG06 486 aa17.08■□□□□ 0.33
TRAPPC8-210ENST00000582513 HOMER3Q9NSC5 361 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms