RNA–Protein interactions for RNA: ENST00000582275.5

CDK5RAP3-224, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 442 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-224ENST00000582275 VTA1Q9NP79 307 aa10.49□□□□□ -0.73
CDK5RAP3-224ENST00000582275 TRMT13Q9NUP7 481 aaKnown RBP10.49□□□□□ -0.73
CDK5RAP3-224ENST00000582275 TLR7Q9NYK1 1049 aaKnown RBP10.49□□□□□ -0.73
CDK5RAP3-224ENST00000582275 NYAP2Q9P242 653 aa10.49□□□□□ -0.73
CDK5RAP3-224ENST00000582275 METRNQ9UJH8 293 aa10.49□□□□□ -0.73
CDK5RAP3-224ENST00000582275 SYNPO2Q9UMS6 1093 aa10.49□□□□□ -0.73
CDK5RAP3-224ENST00000582275 COG6Q9Y2V7 657 aa10.49□□□□□ -0.73
CDK5RAP3-224ENST00000582275 ZNF532Q9HCE3 1301 aa10.49□□□□□ -0.73
CDK5RAP3-224ENST00000582275 F5H6K3 240 aa10.48□□□□□ -0.73
CDK5RAP3-224ENST00000582275 KPNA6O60684 536 aa10.48□□□□□ -0.73
CDK5RAP3-224ENST00000582275 EFCAB14O75071 495 aa10.48□□□□□ -0.73
CDK5RAP3-224ENST00000582275 ARHGEF15O94989 841 aa10.48□□□□□ -0.73
CDK5RAP3-224ENST00000582275 NDUFB10O96000 172 aa10.48□□□□□ -0.73
CDK5RAP3-224ENST00000582275 IL9P15248 144 aa10.48□□□□□ -0.73
CDK5RAP3-224ENST00000582275 PTPN5P54829 565 aa10.48□□□□□ -0.73
CDK5RAP3-224ENST00000582275 KLRC3Q07444 240 aa10.48□□□□□ -0.73
CDK5RAP3-224ENST00000582275 PTPROQ16827 1216 aa10.48□□□□□ -0.73
CDK5RAP3-224ENST00000582275 NFRKBQ6P4R8 1299 aa10.48□□□□□ -0.73
CDK5RAP3-224ENST00000582275 RPAP2Q8IXW5 612 aaPredicted RBP10.48□□□□□ -0.73
CDK5RAP3-224ENST00000582275 LCORLQ8N3X6 602 aa10.48□□□□□ -0.73
CDK5RAP3-224ENST00000582275 KIFC2Q96AC6 838 aa10.48□□□□□ -0.73
CDK5RAP3-224ENST00000582275 CRBNQ96SW2 442 aa10.48□□□□□ -0.73
CDK5RAP3-224ENST00000582275 RAD9AQ99638 391 aa10.48□□□□□ -0.73
CDK5RAP3-224ENST00000582275 MTG1Q9BT17 334 aaPredicted RBP10.48□□□□□ -0.73
CDK5RAP3-224ENST00000582275 SUGCTQ9HAC7 445 aa10.48□□□□□ -0.73
CDK5RAP3-224ENST00000582275 STK24Q9Y6E0 443 aa10.48□□□□□ -0.73
CDK5RAP3-224ENST00000582275 RAD50Q92878 1312 aa10.48□□□□□ -0.73
CDK5RAP3-224ENST00000582275 RARSP54136 660 aaKnown RBP10.47□□□□□ -0.73
CDK5RAP3-224ENST00000582275 CNTN2Q02246 1040 aa10.47□□□□□ -0.73
CDK5RAP3-224ENST00000582275 TIGD5Q53EQ6 642 aa10.47□□□□□ -0.73
CDK5RAP3-224ENST00000582275 FAM47CQ5HY64 1035 aa10.47□□□□□ -0.73
CDK5RAP3-224ENST00000582275 IER5LQ5T953 404 aa10.47□□□□□ -0.73
CDK5RAP3-224ENST00000582275 TRMT2AQ8IZ69 625 aaKnown RBP10.47□□□□□ -0.73
CDK5RAP3-224ENST00000582275 CAGE1Q8TC20 777 aa10.47□□□□□ -0.73
CDK5RAP3-224ENST00000582275 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.47□□□□□ -0.73
CDK5RAP3-224ENST00000582275 NUP88Q99567 741 aaPredicted RBP10.47□□□□□ -0.73
CDK5RAP3-224ENST00000582275 POP1Q99575 1024 aaKnown RBP10.47□□□□□ -0.73
CDK5RAP3-224ENST00000582275 IRF2BPLQ9H1B7 796 aa10.47□□□□□ -0.73
CDK5RAP3-224ENST00000582275 NOD1Q9Y239 953 aa10.47□□□□□ -0.73
CDK5RAP3-224ENST00000582275 ZDBF2Q9HCK1 2354 aa10.47□□□□□ -0.73
CDK5RAP3-224ENST00000582275 REV3LO60673 3130 aa10.46□□□□□ -0.73
CDK5RAP3-224ENST00000582275 LOC102724159A0A0B4J2E5 919 aa10.46□□□□□ -0.73
CDK5RAP3-224ENST00000582275 ABHD14A-ACY1A0A1B0GW23 586 aa10.46□□□□□ -0.73
CDK5RAP3-224ENST00000582275 TCRBV5S4A2TA0A5A2 114 aa10.46□□□□□ -0.73
CDK5RAP3-224ENST00000582275 NCK2O43639 380 aa10.46□□□□□ -0.73
CDK5RAP3-224ENST00000582275 WDR5P61964 334 aaKnown RBP10.46□□□□□ -0.73
CDK5RAP3-224ENST00000582275 PURAQ00577 322 aaKnown RBP10.46□□□□□ -0.73
CDK5RAP3-224ENST00000582275 PWP2Q15269 919 aaKnown RBP10.46□□□□□ -0.73
CDK5RAP3-224ENST00000582275 DUSP28Q4G0W2 176 aa10.46□□□□□ -0.73
CDK5RAP3-224ENST00000582275 TAPT1Q6NXT6 567 aa10.46□□□□□ -0.73
CDK5RAP3-224ENST00000582275 KIAA1211Q6ZU35 1233 aa10.46□□□□□ -0.73
CDK5RAP3-224ENST00000582275 HFE2Q6ZVN8 426 aa10.46□□□□□ -0.73
CDK5RAP3-224ENST00000582275 AACSQ86V21 672 aa10.46□□□□□ -0.73
CDK5RAP3-224ENST00000582275 ADHFE1Q8IWW8 467 aa10.46□□□□□ -0.73
CDK5RAP3-224ENST00000582275 NEK9Q8TD19 979 aa10.46□□□□□ -0.73
CDK5RAP3-224ENST00000582275 AFAP1L1Q8TED9 768 aa10.46□□□□□ -0.73
CDK5RAP3-224ENST00000582275 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.46□□□□□ -0.735e-14■■□□□ 11.9
CDK5RAP3-224ENST00000582275 ARMT1Q9H993 441 aa10.46□□□□□ -0.73
CDK5RAP3-224ENST00000582275 ZNF287Q9HBT7 754 aa10.46□□□□□ -0.73
CDK5RAP3-224ENST00000582275 A1CFQ9NQ94 594 aaKnown RBP10.46□□□□□ -0.73
CDK5RAP3-224ENST00000582275 HOMER2Q9NSB8 354 aa10.46□□□□□ -0.73
CDK5RAP3-224ENST00000582275 RNF146Q9NTX7 359 aa10.46□□□□□ -0.73
CDK5RAP3-224ENST00000582275 ARPP21Q9UBL0 812 aaPredicted RBP10.46□□□□□ -0.73
CDK5RAP3-224ENST00000582275 COL4A4P53420 1690 aaPredicted RBP10.46□□□□□ -0.74
CDK5RAP3-224ENST00000582275 SCN5AQ14524 2016 aa10.46□□□□□ -0.74
CDK5RAP3-224ENST00000582275 SOWAHBA6NEL2 793 aa10.45□□□□□ -0.74
CDK5RAP3-224ENST00000582275 NKRFO15226 690 aaKnown RBP eCLIP10.45□□□□□ -0.74
CDK5RAP3-224ENST00000582275 BCAR3O75815 825 aa10.45□□□□□ -0.74
CDK5RAP3-224ENST00000582275 MBD4O95243 580 aa10.45□□□□□ -0.74
CDK5RAP3-224ENST00000582275 GJB5O95377 273 aa10.45□□□□□ -0.74
CDK5RAP3-224ENST00000582275 MYL3P08590 195 aa10.45□□□□□ -0.74
CDK5RAP3-224ENST00000582275 TRIM27P14373 513 aa10.45□□□□□ -0.74
CDK5RAP3-224ENST00000582275 ZP2Q05996 745 aa10.45□□□□□ -0.74
CDK5RAP3-224ENST00000582275 HSP90AB4PQ58FF6 505 aa10.45□□□□□ -0.74
CDK5RAP3-224ENST00000582275 CNKSR3Q6P9H4 555 aa10.45□□□□□ -0.74
CDK5RAP3-224ENST00000582275 BMP8AQ7Z5Y6 402 aa10.45□□□□□ -0.74
CDK5RAP3-224ENST00000582275 FAM160B2Q86V87 743 aa10.45□□□□□ -0.74
CDK5RAP3-224ENST00000582275 FBXO16Q8IX29 292 aaPredicted RBP10.45□□□□□ -0.74
CDK5RAP3-224ENST00000582275 FBXO22Q8NEZ5 403 aa10.45□□□□□ -0.74
CDK5RAP3-224ENST00000582275 CHURC1Q8WUH1 139 aa10.45□□□□□ -0.74
CDK5RAP3-224ENST00000582275 MRPL38Q96DV4 380 aaKnown RBP10.45□□□□□ -0.74
CDK5RAP3-224ENST00000582275 SAMD11Q96NU1 681 aa10.45□□□□□ -0.74
CDK5RAP3-224ENST00000582275 MKNK2Q9HBH9 465 aa10.45□□□□□ -0.74
CDK5RAP3-224ENST00000582275 ADD3Q9UEY8 706 aaKnown RBP10.45□□□□□ -0.74
CDK5RAP3-224ENST00000582275 LCHNA4D1U4 455 aa10.44□□□□□ -0.74
CDK5RAP3-224ENST00000582275 LINC01553A4QN01 128 aa10.44□□□□□ -0.74
CDK5RAP3-224ENST00000582275 PRKAB2O43741 272 aa10.44□□□□□ -0.74
CDK5RAP3-224ENST00000582275 STAT2P52630 851 aa10.44□□□□□ -0.74
CDK5RAP3-224ENST00000582275 NBPF20Q3BBV1 942 aa10.44□□□□□ -0.74
CDK5RAP3-224ENST00000582275 EEPD1Q7L9B9 569 aa10.44□□□□□ -0.74
CDK5RAP3-224ENST00000582275 HS6ST3Q8IZP7 471 aa10.44□□□□□ -0.74
CDK5RAP3-224ENST00000582275 EFCAB3Q8N7B9 438 aa10.44□□□□□ -0.74
CDK5RAP3-224ENST00000582275 GMCL1P1Q8NEA9 526 aa10.44□□□□□ -0.74
CDK5RAP3-224ENST00000582275 TET1Q8NFU7 2136 aa10.44□□□□□ -0.74
CDK5RAP3-224ENST00000582275 MORC4Q8TE76 937 aa10.44□□□□□ -0.74
CDK5RAP3-224ENST00000582275 PABPC5Q96DU9 382 aaKnown RBP10.44□□□□□ -0.74
CDK5RAP3-224ENST00000582275 MPHOSPH6Q99547 160 aaKnown RBP10.44□□□□□ -0.74
CDK5RAP3-224ENST00000582275 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.44□□□□□ -0.74
CDK5RAP3-224ENST00000582275 PDGFCQ9NRA1 345 aa10.44□□□□□ -0.74
CDK5RAP3-224ENST00000582275 CLIP2Q9UDT6 1046 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms