RNA–Protein interactions for RNA: ENST00000581335.1

NUP85-217, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-217ENST00000581335 GMCL1Q96IK5 515 aa10.39□□□□□ -0.75
NUP85-217ENST00000581335 FGD4Q96M96 766 aa10.39□□□□□ -0.75
NUP85-217ENST00000581335 FAM161BQ96MY7 647 aa10.39□□□□□ -0.75
NUP85-217ENST00000581335 TOX2Q96NM4 488 aa10.39□□□□□ -0.75
NUP85-217ENST00000581335 ABHD16BQ9H3Z7 469 aa10.39□□□□□ -0.75
NUP85-217ENST00000581335 STARD7Q9NQZ5 370 aa10.39□□□□□ -0.75
NUP85-217ENST00000581335 TMEM39AQ9NV64 488 aa10.39□□□□□ -0.75
NUP85-217ENST00000581335 MYADML2A6NDP7 307 aa10.38□□□□□ -0.75
NUP85-217ENST00000581335 TSPY2A6NKD2 308 aa10.38□□□□□ -0.75
NUP85-217ENST00000581335 DCDC2CA8MYV0 355 aa10.38□□□□□ -0.75
NUP85-217ENST00000581335 TRIM6-TRIM34B2RNG4 842 aa10.38□□□□□ -0.75
NUP85-217ENST00000581335 FOXP2O15409 715 aa10.38□□□□□ -0.75
NUP85-217ENST00000581335 ADCY6O43306 1168 aa10.38□□□□□ -0.75
NUP85-217ENST00000581335 MCCP23508 829 aa10.38□□□□□ -0.75
NUP85-217ENST00000581335 CST5P28325 142 aaPredicted RBP10.38□□□□□ -0.75
NUP85-217ENST00000581335 SLC1A4P43007 532 aa10.38□□□□□ -0.75
NUP85-217ENST00000581335 GJA9P57773 515 aa10.38□□□□□ -0.75
NUP85-217ENST00000581335 SMAD3P84022 425 aaKnown RBP10.38□□□□□ -0.75
NUP85-217ENST00000581335 CTDSPL2Q05D32 466 aa10.38□□□□□ -0.75
NUP85-217ENST00000581335 QPCTQ16769 361 aa10.38□□□□□ -0.75
NUP85-217ENST00000581335 CCDC144BQ3MJ40 725 aa10.38□□□□□ -0.75
NUP85-217ENST00000581335 ANKRD45Q5TZF3 282 aa10.38□□□□□ -0.75
NUP85-217ENST00000581335 RCSD1Q6JBY9 416 aa10.38□□□□□ -0.75
NUP85-217ENST00000581335 CCDC129Q6ZRS4 1044 aa10.38□□□□□ -0.75
NUP85-217ENST00000581335 ARMCX2Q7L311 632 aa10.38□□□□□ -0.75
NUP85-217ENST00000581335 CCDC144CPQ8IYA2 1237 aa10.38□□□□□ -0.75
NUP85-217ENST00000581335 PCSK9Q8NBP7 692 aaKnown RBP10.38□□□□□ -0.75
NUP85-217ENST00000581335 AGBL1Q96MI9 1066 aa10.38□□□□□ -0.75
NUP85-217ENST00000581335 UPF3AQ9H1J1 476 aaKnown RBP10.38□□□□□ -0.75
NUP85-217ENST00000581335 SEMA6BQ9H3T3 888 aa10.38□□□□□ -0.75
NUP85-217ENST00000581335 ACAD9Q9H845 621 aa10.38□□□□□ -0.75
NUP85-217ENST00000581335 SPC25Q9HBM1 224 aa10.38□□□□□ -0.75
NUP85-217ENST00000581335 INCENPQ9NQS7 918 aa10.38□□□□□ -0.75
NUP85-217ENST00000581335 IL17RBQ9NRM6 502 aa10.38□□□□□ -0.75
NUP85-217ENST00000581335 HOMER2Q9NSB8 354 aa10.38□□□□□ -0.75
NUP85-217ENST00000581335 ANAPC4Q9UJX5 808 aa10.38□□□□□ -0.75
NUP85-217ENST00000581335 STX8Q9UNK0 236 aa10.38□□□□□ -0.75
NUP85-217ENST00000581335 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.38□□□□□ -0.75
NUP85-217ENST00000581335 ZNF536O15090 1300 aa10.37□□□□□ -0.75
NUP85-217ENST00000581335 ELP1O95163 1332 aa10.37□□□□□ -0.75
NUP85-217ENST00000581335 MROH7Q68CQ1 1323 aa10.37□□□□□ -0.75
NUP85-217ENST00000581335 SOWAHBA6NEL2 793 aa10.37□□□□□ -0.75
NUP85-217ENST00000581335 ASGR1P07306 291 aa10.37□□□□□ -0.75
NUP85-217ENST00000581335 C6orf222P0C671 652 aaPredicted RBP10.37□□□□□ -0.75
NUP85-217ENST00000581335 CDK7P50613 346 aa10.37□□□□□ -0.75
NUP85-217ENST00000581335 EPHB4P54760 987 aa10.37□□□□□ -0.75
NUP85-217ENST00000581335 CNTN2Q02246 1040 aa10.37□□□□□ -0.75
NUP85-217ENST00000581335 FPGSQ05932 587 aa10.37□□□□□ -0.75
NUP85-217ENST00000581335 IKQ13123 557 aaPredicted RBP10.37□□□□□ -0.75
NUP85-217ENST00000581335 TKFCQ3LXA3 575 aa10.37□□□□□ -0.75
NUP85-217ENST00000581335 KCTD1Q719H9 257 aa10.37□□□□□ -0.75
NUP85-217ENST00000581335 FAM133AQ8N9E0 248 aa10.37□□□□□ -0.75
NUP85-217ENST00000581335 VTI1AQ96AJ9 217 aa10.37□□□□□ -0.75
NUP85-217ENST00000581335 CHMP4CQ96CF2 233 aa10.37□□□□□ -0.75
NUP85-217ENST00000581335 EVI5LQ96CN4 794 aa10.37□□□□□ -0.75
NUP85-217ENST00000581335 GLT1D1Q96MS3 346 aa10.37□□□□□ -0.75
NUP85-217ENST00000581335 TRERF1Q96PN7 1200 aa10.37□□□□□ -0.75
NUP85-217ENST00000581335 KATNBL1Q9H079 304 aa10.37□□□□□ -0.75
NUP85-217ENST00000581335 A1CFQ9NQ94 594 aaKnown RBP10.37□□□□□ -0.75
NUP85-217ENST00000581335 HELLSQ9NRZ9 838 aa10.37□□□□□ -0.75
NUP85-217ENST00000581335 ISY1Q9ULR0 285 aaKnown RBP10.37□□□□□ -0.75
NUP85-217ENST00000581335 DDX11L8A8MPP1 907 aa10.36□□□□□ -0.75
NUP85-217ENST00000581335 RANBP6O60518 1105 aaKnown RBP10.36□□□□□ -0.75
NUP85-217ENST00000581335 NMT2O60551 498 aa10.36□□□□□ -0.75
NUP85-217ENST00000581335 TIMP1P01033 207 aa10.36□□□□□ -0.75
NUP85-217ENST00000581335 FGRP09769 529 aa10.36□□□□□ -0.75
NUP85-217ENST00000581335 ALAS1P13196 640 aa10.36□□□□□ -0.75
NUP85-217ENST00000581335 NDUFV2P19404 249 aa10.36□□□□□ -0.75
NUP85-217ENST00000581335 NOVP48745 357 aa10.36□□□□□ -0.75
NUP85-217ENST00000581335 RRP1P56182 461 aaKnown RBP10.36□□□□□ -0.75
NUP85-217ENST00000581335 NKX3-2P78367 333 aa10.36□□□□□ -0.75
NUP85-217ENST00000581335 ALX1Q15699 326 aa10.36□□□□□ -0.75
NUP85-217ENST00000581335 GNASQ5JWF2 1037 aa10.36□□□□□ -0.75
NUP85-217ENST00000581335 VPS53Q5VIR6 699 aa10.36□□□□□ -0.75
NUP85-217ENST00000581335 RNPC3Q96LT9 517 aaKnown RBP10.36□□□□□ -0.75
NUP85-217ENST00000581335 CDX2Q99626 313 aaPredicted RBP10.36□□□□□ -0.75
NUP85-217ENST00000581335 RNF146Q9NTX7 359 aa10.36□□□□□ -0.75
NUP85-217ENST00000581335 PRR12Q9ULL5 1215 aa10.36□□□□□ -0.75
NUP85-217ENST00000581335 A0A0U1RQG5 324 aaPredicted RBP10.35□□□□□ -0.75
NUP85-217ENST00000581335 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.35□□□□□ -0.75
NUP85-217ENST00000581335 ASB14A6NK59 587 aa10.35□□□□□ -0.75
NUP85-217ENST00000581335 ARVCFO00192 962 aa10.35□□□□□ -0.75
NUP85-217ENST00000581335 CTAGE5O15320 804 aa10.35□□□□□ -0.75
NUP85-217ENST00000581335 ORC4O43929 436 aa10.35□□□□□ -0.75
NUP85-217ENST00000581335 PDIA4P13667 645 aaKnown RBP10.35□□□□□ -0.75
NUP85-217ENST00000581335 PDE1AP54750 535 aa10.35□□□□□ -0.75
NUP85-217ENST00000581335 SNAP25P60880 206 aa10.35□□□□□ -0.75
NUP85-217ENST00000581335 TNFAIP2Q03169 654 aa10.35□□□□□ -0.75
NUP85-217ENST00000581335 MCMDC2Q4G0Z9 681 aa10.35□□□□□ -0.75
NUP85-217ENST00000581335 MFSD5Q6N075 450 aa10.35□□□□□ -0.75
NUP85-217ENST00000581335 CCDC174Q6PII3 467 aa10.35□□□□□ -0.75
NUP85-217ENST00000581335 TICAM2Q86XR7 235 aa10.35□□□□□ -0.75
NUP85-217ENST00000581335 CRBNQ96SW2 442 aa10.35□□□□□ -0.75
NUP85-217ENST00000581335 TTYH1Q9H313 450 aaPredicted RBP10.35□□□□□ -0.75
NUP85-217ENST00000581335 GDPD2Q9HCC8 539 aa10.35□□□□□ -0.75
NUP85-217ENST00000581335 TBX21Q9UL17 535 aa10.35□□□□□ -0.75
NUP85-217ENST00000581335 LRRC37A2A6NM11 1700 aa10.35□□□□□ -0.75
NUP85-217ENST00000581335 LCTP09848 1927 aa10.35□□□□□ -0.75
NUP85-217ENST00000581335 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.34□□□□□ -0.75
NUP85-217ENST00000581335 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms