RNA–Protein interactions for RNA: ENST00000580875.1

SNX11-207, Transcript of sorting nexin 11, humanhuman

TSL 2

Gene SNX11, Length 704 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-207ENST00000580875 ALDH5A1P51649 535 aaPredicted RBP24.49■■□□□ 1.51
SNX11-207ENST00000580875 DUSP28Q4G0W2 176 aa24.49■■□□□ 1.51
SNX11-207ENST00000580875 TMEM63BQ5T3F8 832 aa24.49■■□□□ 1.51
SNX11-207ENST00000580875 MFSD6Q6ZSS7 791 aa24.49■■□□□ 1.51
SNX11-207ENST00000580875 EXOC6Q8TAG9 804 aa24.49■■□□□ 1.51
SNX11-207ENST00000580875 PBX4Q9BYU1 374 aa24.49■■□□□ 1.51
SNX11-207ENST00000580875 PRUNE2Q8WUY3 3088 aa24.48■■□□□ 1.51
SNX11-207ENST00000580875 TRIM6-TRIM34B2RNG4 842 aa24.48■■□□□ 1.51
SNX11-207ENST00000580875 VCANP13611 3396 aa24.48■■□□□ 1.51
SNX11-207ENST00000580875 HAND2P61296 217 aa24.48■■□□□ 1.51
SNX11-207ENST00000580875 AKNAD1Q5T1N1 836 aa24.48■■□□□ 1.51
SNX11-207ENST00000580875 CCDC171Q6TFL3 1326 aa24.48■■□□□ 1.51
SNX11-207ENST00000580875 TTC14Q96N46 770 aa24.48■■□□□ 1.51
SNX11-207ENST00000580875 GRXCR1A8MXD5 290 aa24.47■■□□□ 1.51
SNX11-207ENST00000580875 B4GALT4O60513 344 aa24.47■■□□□ 1.51
SNX11-207ENST00000580875 PSMC6P62333 389 aa24.47■■□□□ 1.51
SNX11-207ENST00000580875 ZNF543Q08ER8 600 aa24.47■■□□□ 1.51
SNX11-207ENST00000580875 HERVK_113Q902F9 699 aa24.47■■□□□ 1.51
SNX11-207ENST00000580875 WDR11Q9BZH6 1224 aa24.47■■□□□ 1.51
SNX11-207ENST00000580875 LNPKQ9C0E8 428 aa24.47■■□□□ 1.51
SNX11-207ENST00000580875 TRPV6Q9H1D0 765 aa24.47■■□□□ 1.51
SNX11-207ENST00000580875 MTIF3Q9H2K0 278 aaKnown RBP24.47■■□□□ 1.51
SNX11-207ENST00000580875 LCTP09848 1927 aa24.47■■□□□ 1.51
SNX11-207ENST00000580875 UMODL1Q5DID0 1318 aa24.46■■□□□ 1.51
SNX11-207ENST00000580875 PBX2P40425 430 aa24.46■■□□□ 1.51
SNX11-207ENST00000580875 MFAP1P55081 439 aaKnown RBP24.46■■□□□ 1.51
SNX11-207ENST00000580875 CLEC4DQ8WXI8 215 aa24.46■■□□□ 1.51
SNX11-207ENST00000580875 RILPL2Q969X0 211 aa24.46■■□□□ 1.51
SNX11-207ENST00000580875 NOC4LQ9BVI4 516 aaKnown RBP24.46■■□□□ 1.51
SNX11-207ENST00000580875 RNF41Q9H4P4 317 aaPredicted RBP24.46■■□□□ 1.51
SNX11-207ENST00000580875 PPP4R2Q9NY27 417 aa24.46■■□□□ 1.51
SNX11-207ENST00000580875 FGBP02675 491 aa24.45■■□□□ 1.5
SNX11-207ENST00000580875 SNHG28P0DPA3 235 aa24.45■■□□□ 1.5
SNX11-207ENST00000580875 CALML3P27482 149 aa24.45■■□□□ 1.5
SNX11-207ENST00000580875 SLC30A10Q6XR72 485 aa24.45■■□□□ 1.5
SNX11-207ENST00000580875 RNF207Q6ZRF8 634 aa24.45■■□□□ 1.5
SNX11-207ENST00000580875 TBC1D10CQ8IV04 446 aa24.45■■□□□ 1.5
SNX11-207ENST00000580875 WDR19Q8NEZ3 1342 aa24.44■■□□□ 1.5
SNX11-207ENST00000580875 RBM47A0AV96 593 aaKnown RBP24.44■■□□□ 1.5
SNX11-207ENST00000580875 CPT1AP50416 773 aa24.44■■□□□ 1.5
SNX11-207ENST00000580875 AAMPQ13685 434 aa24.44■■□□□ 1.5
SNX11-207ENST00000580875 ESR2Q92731 530 aa24.44■■□□□ 1.5
SNX11-207ENST00000580875 MPHOSPH6Q99547 160 aaKnown RBP24.44■■□□□ 1.5
SNX11-207ENST00000580875 ALDH8A1Q9H2A2 487 aaPredicted RBP24.44■■□□□ 1.5
SNX11-207ENST00000580875 POLR3EQ9NVU0 708 aa24.44■■□□□ 1.5
SNX11-207ENST00000580875 CXXC1Q9P0U4 656 aaPredicted RBP24.44■■□□□ 1.5
SNX11-207ENST00000580875 CCL23P55773 120 aa24.43■■□□□ 1.5
SNX11-207ENST00000580875 RPS6P62753 249 aaKnown RBP24.43■■□□□ 1.5
SNX11-207ENST00000580875 RAB30Q15771 203 aa24.43■■□□□ 1.5
SNX11-207ENST00000580875 WNT8AQ9H1J5 351 aa24.43■■□□□ 1.5
SNX11-207ENST00000580875 MSRAQ9UJ68 235 aa24.43■■□□□ 1.5
SNX11-207ENST00000580875 SDSP20132 328 aa24.42■■□□□ 1.5
SNX11-207ENST00000580875 PURAQ00577 322 aaKnown RBP24.42■■□□□ 1.5
SNX11-207ENST00000580875 PDE4DQ08499 809 aa24.42■■□□□ 1.5
SNX11-207ENST00000580875 GPATCH4Q5T3I0 446 aaKnown RBP24.42■■□□□ 1.5
SNX11-207ENST00000580875 SMC5Q8IY18 1101 aa24.42■■□□□ 1.5
SNX11-207ENST00000580875 DNERQ8NFT8 737 aa24.42■■□□□ 1.5
SNX11-207ENST00000580875 OR6J1Q8NGC5 347 aa24.42■■□□□ 1.5
SNX11-207ENST00000580875 GAS2L1Q99501 681 aaPredicted RBP24.42■■□□□ 1.5
SNX11-207ENST00000580875 GPHNQ9NQX3 736 aaPredicted RBP24.42■■□□□ 1.5
SNX11-207ENST00000580875 NEDD4P46934 1319 aa24.41■■□□□ 1.5
SNX11-207ENST00000580875 SUPT20HL2P0C7V6 817 aa24.41■■□□□ 1.5
SNX11-207ENST00000580875 NT5C2P49902 561 aa24.41■■□□□ 1.5
SNX11-207ENST00000580875 PPP2R5BQ15173 497 aa24.41■■□□□ 1.5
SNX11-207ENST00000580875 BRDTQ58F21 947 aaPredicted RBP24.41■■□□□ 1.5
SNX11-207ENST00000580875 B4GALNT3Q6L9W6 998 aa24.41■■□□□ 1.5
SNX11-207ENST00000580875 OTOP2Q7RTS6 562 aa24.41■■□□□ 1.5
SNX11-207ENST00000580875 DGKHQ86XP1 1220 aa24.41■■□□□ 1.5
SNX11-207ENST00000580875 RPUSD2Q8IZ73 545 aaKnown RBP24.41■■□□□ 1.5
SNX11-207ENST00000580875 RWDD1Q9H446 243 aaPredicted RBP24.41■■□□□ 1.5
SNX11-207ENST00000580875 RAD50Q92878 1312 aa24.4■■□□□ 1.5
SNX11-207ENST00000580875 CHD9Q3L8U1 2897 aa24.4■■□□□ 1.5
SNX11-207ENST00000580875 B4DLN1 442 aa24.4■■□□□ 1.5
SNX11-207ENST00000580875 ZNF213O14771 459 aa24.4■■□□□ 1.5
SNX11-207ENST00000580875 NKRFO15226 690 aaKnown RBP eCLIP24.4■■□□□ 1.5
SNX11-207ENST00000580875 MYL3P08590 195 aa24.4■■□□□ 1.5
SNX11-207ENST00000580875 EDNRBP24530 442 aa24.4■■□□□ 1.5
SNX11-207ENST00000580875 MRPL12P52815 198 aaKnown RBP24.4■■□□□ 1.5
SNX11-207ENST00000580875 USP38Q8NB14 1042 aa24.4■■□□□ 1.5
SNX11-207ENST00000580875 SCFD2Q8WU76 684 aa24.4■■□□□ 1.5
SNX11-207ENST00000580875 ZKSCAN3Q9BRR0 538 aa24.4■■□□□ 1.5
SNX11-207ENST00000580875 MTG1Q9BT17 334 aaPredicted RBP24.4■■□□□ 1.5
SNX11-207ENST00000580875 TRMT13Q9NUP7 481 aaKnown RBP24.4■■□□□ 1.5
SNX11-207ENST00000580875 TNKSO95271 1327 aa24.39■■□□□ 1.5
SNX11-207ENST00000580875 SPTBN5Q9NRC6 3674 aaKnown RBP24.39■■□□□ 1.5
SNX11-207ENST00000580875 GOLGA8HP0CJ92 632 aa24.39■■□□□ 1.49
SNX11-207ENST00000580875 CHD1LQ86WJ1 897 aa24.39■■□□□ 1.49
SNX11-207ENST00000580875 SYMPKQ92797 1274 aaKnown RBP24.39■■□□□ 1.49
SNX11-207ENST00000580875 PRDM12Q9H4Q4 367 aa24.39■■□□□ 1.49
SNX11-207ENST00000580875 USH1GQ495M9 461 aa24.38■■□□□ 1.49
SNX11-207ENST00000580875 CCDC178Q5BJE1 867 aa24.38■■□□□ 1.49
SNX11-207ENST00000580875 IQCA1Q86XH1 822 aa24.38■■□□□ 1.49
SNX11-207ENST00000580875 PLEKHM2Q8IWE5 1019 aa24.38■■□□□ 1.49
SNX11-207ENST00000580875 RGS22Q8NE09 1264 aa24.38■■□□□ 1.49
SNX11-207ENST00000580875 SCLYQ96I15 445 aa24.38■■□□□ 1.49
SNX11-207ENST00000580875 OSBPL3Q9H4L5 887 aa24.38■■□□□ 1.49
SNX11-207ENST00000580875 KPNA6O60684 536 aa24.37■■□□□ 1.49
SNX11-207ENST00000580875 CWC27Q6UX04 472 aaKnown RBP24.37■■□□□ 1.49
SNX11-207ENST00000580875 PNMA1Q8ND90 353 aa24.37■■□□□ 1.49
SNX11-207ENST00000580875 UBA5Q9GZZ9 404 aa24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms