RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 FAM86C1Q9NVL1 165 aa9.32□□□□□ -0.92
SMARCE1-217ENST00000580654 MTUS1Q9ULD2 1270 aa9.32□□□□□ -0.92
SMARCE1-217ENST00000580654 DDX49Q9Y6V7 483 aaKnown RBP9.32□□□□□ -0.92
SMARCE1-217ENST00000580654 SCN10AQ9Y5Y9 1956 aa9.32□□□□□ -0.92
SMARCE1-217ENST00000580654 TNKSO95271 1327 aa9.31□□□□□ -0.92
SMARCE1-217ENST00000580654 PNMA6EA0A0J9YXQ4 647 aa9.31□□□□□ -0.92
SMARCE1-217ENST00000580654 DYNC1LI2O43237 492 aaPredicted RBP9.31□□□□□ -0.92
SMARCE1-217ENST00000580654 IDH1O75874 414 aaKnown RBP9.31□□□□□ -0.92
SMARCE1-217ENST00000580654 IQCF3P0C7M6 154 aa9.31□□□□□ -0.92
SMARCE1-217ENST00000580654 EEF2P13639 858 aaKnown RBP9.31□□□□□ -0.92
SMARCE1-217ENST00000580654 RFC2P35250 354 aa9.31□□□□□ -0.92
SMARCE1-217ENST00000580654 DEFB103AP81534 67 aa9.31□□□□□ -0.92
SMARCE1-217ENST00000580654 CNTN2Q02246 1040 aa9.31□□□□□ -0.92
SMARCE1-217ENST00000580654 GPNMBQ14956 572 aa9.31□□□□□ -0.92
SMARCE1-217ENST00000580654 PUS10Q3MIT2 529 aaKnown RBP9.31□□□□□ -0.92
SMARCE1-217ENST00000580654 TNNI3KQ59H18 835 aa9.31□□□□□ -0.92
SMARCE1-217ENST00000580654 CCDC158Q5M9N0 1113 aa9.31□□□□□ -0.92
SMARCE1-217ENST00000580654 CERS3Q8IU89 383 aa9.31□□□□□ -0.92
SMARCE1-217ENST00000580654 HOMEZQ8IX15 550 aa9.31□□□□□ -0.92
SMARCE1-217ENST00000580654 SH2D4AQ9H788 454 aa9.31□□□□□ -0.92
SMARCE1-217ENST00000580654 PDGFCQ9NRA1 345 aa9.31□□□□□ -0.92
SMARCE1-217ENST00000580654 MUTYHQ9UIF7 546 aa9.31□□□□□ -0.92
SMARCE1-217ENST00000580654 FPGT-TNNI3KV9GXZ4 949 aa9.31□□□□□ -0.92
SMARCE1-217ENST00000580654 PTPRZ1P23471 2315 aaPredicted RBP9.31□□□□□ -0.92
SMARCE1-217ENST00000580654 CACNA1GO43497 2377 aa9.3□□□□□ -0.92
SMARCE1-217ENST00000580654 CACNA1HO95180 2353 aa9.3□□□□□ -0.92
SMARCE1-217ENST00000580654 MYO15AQ9UKN7 3530 aa9.3□□□□□ -0.92
SMARCE1-217ENST00000580654 LINC01553A4QN01 128 aa9.3□□□□□ -0.92
SMARCE1-217ENST00000580654 SOWAHBA6NEL2 793 aa9.3□□□□□ -0.92
SMARCE1-217ENST00000580654 ATP2A1O14983 1001 aa9.3□□□□□ -0.92
SMARCE1-217ENST00000580654 WDR5P61964 334 aaKnown RBP9.3□□□□□ -0.92
SMARCE1-217ENST00000580654 TCTN1Q2MV58 587 aa9.3□□□□□ -0.92
SMARCE1-217ENST00000580654 HERC4Q5GLZ8 1057 aaPredicted RBP9.3□□□□□ -0.92
SMARCE1-217ENST00000580654 NOL8Q76FK4 1167 aaKnown RBP9.3□□□□□ -0.92
SMARCE1-217ENST00000580654 BMP8AQ7Z5Y6 402 aa9.3□□□□□ -0.92
SMARCE1-217ENST00000580654 ADHFE1Q8IWW8 467 aa9.3□□□□□ -0.92
SMARCE1-217ENST00000580654 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.3□□□□□ -0.92
SMARCE1-217ENST00000580654 PPP1R13LQ8WUF5 828 aa9.3□□□□□ -0.92
SMARCE1-217ENST00000580654 PTCD2Q8WV60 388 aaKnown RBP9.3□□□□□ -0.92
SMARCE1-217ENST00000580654 NUP88Q99567 741 aaPredicted RBP9.3□□□□□ -0.92
SMARCE1-217ENST00000580654 PRRX2Q99811 253 aa9.3□□□□□ -0.92
SMARCE1-217ENST00000580654 GPR108Q9NPR9 543 aa9.3□□□□□ -0.92
SMARCE1-217ENST00000580654 MCM9Q9NXL9 1143 aa9.3□□□□□ -0.92
SMARCE1-217ENST00000580654 TLR7Q9NYK1 1049 aaKnown RBP9.3□□□□□ -0.92
SMARCE1-217ENST00000580654 PRKAG3Q9UGI9 489 aa9.3□□□□□ -0.92
SMARCE1-217ENST00000580654 DBNLQ9UJU6 430 aaKnown RBP9.3□□□□□ -0.92
SMARCE1-217ENST00000580654 HDAC5Q9UQL6 1122 aa9.3□□□□□ -0.92
SMARCE1-217ENST00000580654 COL4A6Q14031 1691 aa9.29□□□□□ -0.92
SMARCE1-217ENST00000580654 BAIAP3O94812 1187 aa9.29□□□□□ -0.92
SMARCE1-217ENST00000580654 SUPT20HL2P0C7V6 817 aa9.29□□□□□ -0.92
SMARCE1-217ENST00000580654 SLC4A3P48751 1232 aa9.29□□□□□ -0.92
SMARCE1-217ENST00000580654 G3BP1Q13283 466 aaKnown RBP eCLIP9.29□□□□□ -0.92
SMARCE1-217ENST00000580654 COL19A1Q14993 1142 aa9.29□□□□□ -0.92
SMARCE1-217ENST00000580654 ALDH1L2Q3SY69 923 aa9.29□□□□□ -0.92
SMARCE1-217ENST00000580654 TAPT1Q6NXT6 567 aa9.29□□□□□ -0.92
SMARCE1-217ENST00000580654 CPXCR1Q8N123 301 aa9.29□□□□□ -0.92
SMARCE1-217ENST00000580654 ANKRD35Q8N283 1001 aa9.29□□□□□ -0.92
SMARCE1-217ENST00000580654 FAM133AQ8N9E0 248 aa9.29□□□□□ -0.92
SMARCE1-217ENST00000580654 SDR42E1Q8WUS8 393 aa9.29□□□□□ -0.92
SMARCE1-217ENST00000580654 TGS1Q96RS0 853 aaKnown RBP9.29□□□□□ -0.92
SMARCE1-217ENST00000580654 SLF1Q9BQI6 1058 aa9.29□□□□□ -0.92
SMARCE1-217ENST00000580654 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.29□□□□□ -0.92
SMARCE1-217ENST00000580654 FTOQ9C0B1 505 aaKnown RBP eCLIP9.29□□□□□ -0.92
SMARCE1-217ENST00000580654 AP5M1Q9H0R1 490 aa9.29□□□□□ -0.92
SMARCE1-217ENST00000580654 RAVER2Q9HCJ3 691 aaKnown RBP9.29□□□□□ -0.92
SMARCE1-217ENST00000580654 DCP1AQ9NPI6 582 aaPredicted RBP9.29□□□□□ -0.92
SMARCE1-217ENST00000580654 SWAP70Q9UH65 585 aa9.29□□□□□ -0.92
SMARCE1-217ENST00000580654 NOB1Q9ULX3 412 aaKnown RBP9.29□□□□□ -0.92
SMARCE1-217ENST00000580654 NLRC5Q86WI3 1866 aa9.28□□□□□ -0.92
SMARCE1-217ENST00000580654 MAGEB6P1A0A0J9YX57 407 aa9.28□□□□□ -0.92
SMARCE1-217ENST00000580654 ZEB2O60315 1214 aa9.28□□□□□ -0.92
SMARCE1-217ENST00000580654 GJB5O95377 273 aa9.28□□□□□ -0.92
SMARCE1-217ENST00000580654 LTBRP36941 435 aa9.28□□□□□ -0.92
SMARCE1-217ENST00000580654 PURAQ00577 322 aaKnown RBP9.28□□□□□ -0.92
SMARCE1-217ENST00000580654 RNF135Q8IUD6 432 aa9.28□□□□□ -0.92
SMARCE1-217ENST00000580654 EDAQ92838 391 aa9.28□□□□□ -0.92
SMARCE1-217ENST00000580654 PABPC5Q96DU9 382 aaKnown RBP9.28□□□□□ -0.92
SMARCE1-217ENST00000580654 C17orf80Q9BSJ5 609 aa9.28□□□□□ -0.92
SMARCE1-217ENST00000580654 SMC4Q9NTJ3 1288 aa9.28□□□□□ -0.92
SMARCE1-217ENST00000580654 VPS9D1Q9Y2B5 631 aa9.28□□□□□ -0.92
SMARCE1-217ENST00000580654 Q9Y3F1 56 aa9.28□□□□□ -0.92
SMARCE1-217ENST00000580654 MYH4Q9Y623 1939 aa9.28□□□□□ -0.92
SMARCE1-217ENST00000580654 RIF1Q5UIP0 2472 aaKnown RBP9.28□□□□□ -0.92
SMARCE1-217ENST00000580654 BAHCC1Q9P281 2608 aa9.27□□□□□ -0.93
SMARCE1-217ENST00000580654 CYP2D7A0A087X1C5 515 aa9.27□□□□□ -0.93
SMARCE1-217ENST00000580654 TMEM221A6NGB7 291 aa9.27□□□□□ -0.93
SMARCE1-217ENST00000580654 M0R296 226 aa9.27□□□□□ -0.93
SMARCE1-217ENST00000580654 RAD21O60216 631 aa9.27□□□□□ -0.93
SMARCE1-217ENST00000580654 KCNJ6P48051 423 aa9.27□□□□□ -0.93
SMARCE1-217ENST00000580654 CDK8P49336 464 aa9.27□□□□□ -0.93
SMARCE1-217ENST00000580654 TPRNQ4KMQ1 711 aa9.27□□□□□ -0.93
SMARCE1-217ENST00000580654 TCEAL5Q5H9L2 206 aa9.27□□□□□ -0.93
SMARCE1-217ENST00000580654 THSD4Q6ZMP0 1018 aa9.27□□□□□ -0.93
SMARCE1-217ENST00000580654 FBXO16Q8IX29 292 aaPredicted RBP9.27□□□□□ -0.93
SMARCE1-217ENST00000580654 LCORLQ8N3X6 602 aa9.27□□□□□ -0.93
SMARCE1-217ENST00000580654 PBXIP1Q96AQ6 731 aa9.27□□□□□ -0.93
SMARCE1-217ENST00000580654 MRPL38Q96DV4 380 aaKnown RBP9.27□□□□□ -0.93
SMARCE1-217ENST00000580654 CCDC17Q96LX7 622 aa9.27□□□□□ -0.93
SMARCE1-217ENST00000580654 CTAGE1Q96RT6 745 aa9.27□□□□□ -0.93
SMARCE1-217ENST00000580654 KCNK17Q96T54 332 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms