RNA–Protein interactions for RNA: ENST00000580498.5

SMG8-204, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 5

Gene SMG8, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-204ENST00000580498 CABYRO75952 493 aa23.41■■□□□ 1.34
SMG8-204ENST00000580498 KIF5BP33176 963 aa23.41■■□□□ 1.34
SMG8-204ENST00000580498 MDM2Q00987 491 aaPredicted RBP23.41■■□□□ 1.34
SMG8-204ENST00000580498 QRICH1Q2TAL8 776 aa23.41■■□□□ 1.34
SMG8-204ENST00000580498 SLC30A10Q6XR72 485 aa23.41■■□□□ 1.34
SMG8-204ENST00000580498 NFXL1Q6ZNB6 911 aa23.41■■□□□ 1.34
SMG8-204ENST00000580498 TDHQ8IZJ6 230 aa23.41■■□□□ 1.34
SMG8-204ENST00000580498 MORC4Q8TE76 937 aa23.41■■□□□ 1.34
SMG8-204ENST00000580498 CPVLQ9H3G5 476 aa23.41■■□□□ 1.34
SMG8-204ENST00000580498 TLR3O15455 904 aaKnown RBP23.4■■□□□ 1.34
SMG8-204ENST00000580498 PQBP1O60828 265 aaKnown RBP23.4■■□□□ 1.34
SMG8-204ENST00000580498 CDC45O75419 566 aa23.4■■□□□ 1.34
SMG8-204ENST00000580498 ASGR1P07306 291 aa23.4■■□□□ 1.34
SMG8-204ENST00000580498 CLTBP09497 229 aa23.4■■□□□ 1.34
SMG8-204ENST00000580498 GRM4Q14833 912 aa23.4■■□□□ 1.34
SMG8-204ENST00000580498 CTCFLQ8NI51 663 aaPredicted RBP23.4■■□□□ 1.34
SMG8-204ENST00000580498 TMEM87BQ96K49 555 aa23.4■■□□□ 1.34
SMG8-204ENST00000580498 SEZ6LQ9BYH1 1024 aa23.4■■□□□ 1.34
SMG8-204ENST00000580498 KATNBL1Q9H079 304 aa23.4■■□□□ 1.34
SMG8-204ENST00000580498 JMJD4Q9H9V9 463 aa23.4■■□□□ 1.34
SMG8-204ENST00000580498 A0A0U1RQG5 324 aaPredicted RBP23.39■■□□□ 1.33
SMG8-204ENST00000580498 CCDC69A6NI79 296 aa23.39■■□□□ 1.33
SMG8-204ENST00000580498 ZBTB5O15062 677 aa23.39■■□□□ 1.33
SMG8-204ENST00000580498 NKRFO15226 690 aaKnown RBP eCLIP23.39■■□□□ 1.33
SMG8-204ENST00000580498 TLE2Q04725 743 aa23.39■■□□□ 1.33
SMG8-204ENST00000580498 FSCN1Q16658 493 aaKnown RBP23.39■■□□□ 1.33
SMG8-204ENST00000580498 SAMD3Q8N6K7 520 aa23.39■■□□□ 1.33
SMG8-204ENST00000580498 NSUN6Q8TEA1 469 aaKnown RBP23.39■■□□□ 1.33
SMG8-204ENST00000580498 LSG1Q9H089 658 aaKnown RBP23.39■■□□□ 1.33
SMG8-204ENST00000580498 PALM3A6NDB9 673 aaPredicted RBP23.38■■□□□ 1.33
SMG8-204ENST00000580498 DYNC1LI2O43237 492 aaPredicted RBP23.38■■□□□ 1.33
SMG8-204ENST00000580498 GNAQP50148 359 aa23.38■■□□□ 1.33
SMG8-204ENST00000580498 PPP2R5BQ15173 497 aa23.38■■□□□ 1.33
SMG8-204ENST00000580498 SCFD2Q8WU76 684 aa23.38■■□□□ 1.33
SMG8-204ENST00000580498 TOX2Q96NM4 488 aa23.38■■□□□ 1.33
SMG8-204ENST00000580498 WDR11Q9BZH6 1224 aa23.38■■□□□ 1.33
SMG8-204ENST00000580498 MAP3K20Q9NYL2 800 aaKnown RBP23.38■■□□□ 1.33
SMG8-204ENST00000580498 MAD2L2Q9UI95 211 aa23.38■■□□□ 1.33
SMG8-204ENST00000580498 PRC1O43663 620 aa23.37■■□□□ 1.33
SMG8-204ENST00000580498 DDAH1O94760 285 aa23.37■■□□□ 1.33
SMG8-204ENST00000580498 CALM1P0DP23 149 aa23.37■■□□□ 1.33
SMG8-204ENST00000580498 CALM2P0DP24 149 aa23.37■■□□□ 1.33
SMG8-204ENST00000580498 CALM3P0DP25 149 aa23.37■■□□□ 1.33
SMG8-204ENST00000580498 RAG1P15918 1043 aa23.37■■□□□ 1.33
SMG8-204ENST00000580498 CPT1AP50416 773 aa23.37■■□□□ 1.33
SMG8-204ENST00000580498 DUSP28Q4G0W2 176 aa23.37■■□□□ 1.33
SMG8-204ENST00000580498 CHST3Q7LGC8 479 aa23.37■■□□□ 1.33
SMG8-204ENST00000580498 HOMER1Q86YM7 354 aa23.37■■□□□ 1.33
SMG8-204ENST00000580498 MB21D2Q8IYB1 491 aaPredicted RBP23.37■■□□□ 1.33
SMG8-204ENST00000580498 STAG2Q8N3U4 1231 aa23.37■■□□□ 1.33
SMG8-204ENST00000580498 GPHNQ9NQX3 736 aaPredicted RBP23.37■■□□□ 1.33
SMG8-204ENST00000580498 TMEM39AQ9NV64 488 aa23.37■■□□□ 1.33
SMG8-204ENST00000580498 GNEQ9Y223 722 aaKnown RBP23.37■■□□□ 1.33
SMG8-204ENST00000580498 PCDHA1Q9Y5I3 950 aa23.37■■□□□ 1.33
SMG8-204ENST00000580498 LRRC37A2A6NM11 1700 aa23.36■■□□□ 1.33
SMG8-204ENST00000580498 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.36■■□□□ 1.33
SMG8-204ENST00000580498 SLC27A2O14975 620 aa23.36■■□□□ 1.33
SMG8-204ENST00000580498 CFBP00751 764 aa23.36■■□□□ 1.33
SMG8-204ENST00000580498 SMPD1P17405 629 aa23.36■■□□□ 1.33
SMG8-204ENST00000580498 NKX3-2P78367 333 aa23.36■■□□□ 1.33
SMG8-204ENST00000580498 ARHGEF16Q5VV41 709 aa23.36■■□□□ 1.33
SMG8-204ENST00000580498 CREB3L3Q68CJ9 461 aa23.36■■□□□ 1.33
SMG8-204ENST00000580498 TAPT1Q6NXT6 567 aa23.36■■□□□ 1.33
SMG8-204ENST00000580498 SYNE3Q6ZMZ3 975 aa23.36■■□□□ 1.33
SMG8-204ENST00000580498 PURBQ96QR8 312 aaKnown RBP23.36■■□□□ 1.33
SMG8-204ENST00000580498 IWS1Q96ST2 819 aa23.36■■□□□ 1.33
SMG8-204ENST00000580498 MAP3K14Q99558 947 aa23.36■■□□□ 1.33
SMG8-204ENST00000580498 LZTS2Q9BRK4 669 aa23.36■■□□□ 1.33
SMG8-204ENST00000580498 PDLIM7Q9NR12 457 aa23.36■■□□□ 1.33
SMG8-204ENST00000580498 POLR3EQ9NVU0 708 aa23.36■■□□□ 1.33
SMG8-204ENST00000580498 ASTN1O14525 1302 aa23.35■■□□□ 1.33
SMG8-204ENST00000580498 MYADML2A6NDP7 307 aa23.35■■□□□ 1.33
SMG8-204ENST00000580498 TTLL4Q14679 1199 aa23.35■■□□□ 1.33
SMG8-204ENST00000580498 STXBP2Q15833 593 aa23.35■■□□□ 1.33
SMG8-204ENST00000580498 CCSAPQ6IQ19 270 aaPredicted RBP23.35■■□□□ 1.33
SMG8-204ENST00000580498 STOX1Q6ZVD7 989 aa23.35■■□□□ 1.33
SMG8-204ENST00000580498 ANKRD33Q7Z3H0 272 aa23.35■■□□□ 1.33
SMG8-204ENST00000580498 RMDN3Q96TC7 470 aa23.35■■□□□ 1.33
SMG8-204ENST00000580498 PDGFCQ9NRA1 345 aa23.35■■□□□ 1.33
SMG8-204ENST00000580498 PCDH10Q9P2E7 1040 aa23.35■■□□□ 1.33
SMG8-204ENST00000580498 SEC63Q9UGP8 760 aaKnown RBP23.35■■□□□ 1.33
SMG8-204ENST00000580498 LCTP09848 1927 aa23.35■■□□□ 1.33
SMG8-204ENST00000580498 ARVCFO00192 962 aa23.34■■□□□ 1.33
SMG8-204ENST00000580498 ADCY6O43306 1168 aa23.34■■□□□ 1.33
SMG8-204ENST00000580498 BEX3Q00994 111 aa23.34■■□□□ 1.33
SMG8-204ENST00000580498 KRT32Q14532 448 aa23.34■■□□□ 1.33
SMG8-204ENST00000580498 ZNF654Q8IZM8 581 aa23.34■■□□□ 1.33
SMG8-204ENST00000580498 OR6J1Q8NGC5 347 aa23.34■■□□□ 1.33
SMG8-204ENST00000580498 IGDCC4Q8TDY8 1250 aa23.34■■□□□ 1.33
SMG8-204ENST00000580498 PNMA6FA0A0J9YX94 578 aa23.33■■□□□ 1.33
SMG8-204ENST00000580498 EDNRBP24530 442 aa23.33■■□□□ 1.33
SMG8-204ENST00000580498 TROAPQ12815 778 aa23.33■■□□□ 1.33
SMG8-204ENST00000580498 NECTIN1Q15223 517 aa23.33■■□□□ 1.33
SMG8-204ENST00000580498 LRIT3Q3SXY7 679 aa23.33■■□□□ 1.33
SMG8-204ENST00000580498 SYTL5Q8TDW5 730 aaPredicted RBP23.33■■□□□ 1.33
SMG8-204ENST00000580498 MTMR8Q96EF0 704 aa23.33■■□□□ 1.33
SMG8-204ENST00000580498 RRP36Q96EU6 259 aaKnown RBP23.33■■□□□ 1.33
SMG8-204ENST00000580498 RIOX1Q9H6W3 641 aa23.33■■□□□ 1.33
SMG8-204ENST00000580498 SLC12A7Q9Y666 1083 aa23.33■■□□□ 1.33
SMG8-204ENST00000580498 RBM47A0AV96 593 aaKnown RBP23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms