RNA–Protein interactions for RNA: ENST00000580158.1

KPNB1-209, Transcript of karyopherin subunit beta 1, human

TSL 2

Gene KPNB1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KPNB1-209	ENST00000580158	MOV10L1	Q9BXT6	1211 aa	Known RBP	7.41	□□□□□ -1.22
KPNB1-209	ENST00000580158	DHX36	Q9H2U1	1008 aa	Known RBP	7.41	□□□□□ -1.22
KPNB1-209	ENST00000580158	ZFAND3	Q9H8U3	227 aa		7.41	□□□□□ -1.22
KPNB1-209	ENST00000580158	HOXC10	Q9NYD6	342 aa		7.41	□□□□□ -1.22
KPNB1-209	ENST00000580158	ABCF2	Q9UG63	623 aa		7.41	□□□□□ -1.22
KPNB1-209	ENST00000580158	FAM184B	Q9ULE4	1060 aa		7.41	□□□□□ -1.22
KPNB1-209	ENST00000580158	CNPY2	Q9Y2B0	182 aa		7.41	□□□□□ -1.22
KPNB1-209	ENST00000580158	MROH7-TTC4	A0A0A0MT08	1334 aa		7.41	□□□□□ -1.22
KPNB1-209	ENST00000580158	C5orf42	Q9H799	3197 aa		7.4	□□□□□ -1.22
KPNB1-209	ENST00000580158	GPR75-ASB3	A0A0A6YYF3	556 aa		7.4	□□□□□ -1.22
KPNB1-209	ENST00000580158	PROB1	E7EW31	1015 aa		7.4	□□□□□ -1.22
KPNB1-209	ENST00000580158	TRIM66	O15016	1216 aa		7.4	□□□□□ -1.22
KPNB1-209	ENST00000580158	LPXN	O60711	386 aa		7.4	□□□□□ -1.22
KPNB1-209	ENST00000580158	CD4	P01730	458 aa		7.4	□□□□□ -1.22
KPNB1-209	ENST00000580158	C6orf222	P0C671	652 aa	Predicted RBP	7.4	□□□□□ -1.22
KPNB1-209	ENST00000580158	FGFR2	P21802	821 aa		7.4	□□□□□ -1.22
KPNB1-209	ENST00000580158	GRM5	P41594	1212 aa		7.4	□□□□□ -1.22
KPNB1-209	ENST00000580158	ZP2	Q05996	745 aa		7.4	□□□□□ -1.22
KPNB1-209	ENST00000580158	PLS1	Q14651	629 aa		7.4	□□□□□ -1.22
KPNB1-209	ENST00000580158	WDR43	Q15061	677 aa	Known RBP eCLIP	7.4	□□□□□ -1.22
KPNB1-209	ENST00000580158	NBPF20	Q3BBV1	942 aa		7.4	□□□□□ -1.22
KPNB1-209	ENST00000580158	HERC4	Q5GLZ8	1057 aa	Predicted RBP	7.4	□□□□□ -1.22
KPNB1-209	ENST00000580158	BEND3	Q5T5X7	828 aa		7.4	□□□□□ -1.22
KPNB1-209	ENST00000580158	ADHFE1	Q8IWW8	467 aa		7.4	□□□□□ -1.22
KPNB1-209	ENST00000580158	EDA	Q92838	391 aa		7.4	□□□□□ -1.22
KPNB1-209	ENST00000580158	ITPKC	Q96DU7	683 aa		7.4	□□□□□ -1.22
KPNB1-209	ENST00000580158	SPATC1L	Q9H0A9	340 aa		7.4	□□□□□ -1.22
KPNB1-209	ENST00000580158	ZBTB21	Q9ULJ3	1066 aa		7.4	□□□□□ -1.22
KPNB1-209	ENST00000580158	SYNRG	Q9UMZ2	1314 aa		7.4	□□□□□ -1.22
KPNB1-209	ENST00000580158	ROBO3	Q96MS0	1386 aa		7.4	□□□□□ -1.22
KPNB1-209	ENST00000580158	SIPA1L1	O43166	1804 aa		7.4	□□□□□ -1.23
KPNB1-209	ENST00000580158	MYH1	P12882	1939 aa		7.4	□□□□□ -1.23
KPNB1-209	ENST00000580158	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	7.39	□□□□□ -1.23
KPNB1-209	ENST00000580158	MCM3AP	O60318	1980 aa		7.39	□□□□□ -1.23
KPNB1-209	ENST00000580158	TMEM221	A6NGB7	291 aa		7.39	□□□□□ -1.23
KPNB1-209	ENST00000580158		M0R296	226 aa		7.39	□□□□□ -1.23
KPNB1-209	ENST00000580158	DUSP11	O75319	330 aa	Known RBP	7.39	□□□□□ -1.23
KPNB1-209	ENST00000580158	GDF11	O95390	407 aa		7.39	□□□□□ -1.23
KPNB1-209	ENST00000580158	ZNF865	P0CJ78	1059 aa	Predicted RBP	7.39	□□□□□ -1.23
KPNB1-209	ENST00000580158	BMP2	P12643	396 aa		7.39	□□□□□ -1.23
KPNB1-209	ENST00000580158	VCAM1	P19320	739 aa		7.39	□□□□□ -1.23
KPNB1-209	ENST00000580158	CST5	P28325	142 aa	Predicted RBP	7.39	□□□□□ -1.23
KPNB1-209	ENST00000580158	IRS1	P35568	1242 aa		7.39	□□□□□ -1.23
KPNB1-209	ENST00000580158	RHBDL3	P58872	404 aa		7.39	□□□□□ -1.23
KPNB1-209	ENST00000580158	GSTO1	P78417	241 aa		7.39	□□□□□ -1.23
KPNB1-209	ENST00000580158	COG2	Q14746	738 aa		7.39	□□□□□ -1.23
KPNB1-209	ENST00000580158	TWISTNB	Q3B726	338 aa	Predicted RBP	7.39	□□□□□ -1.23
KPNB1-209	ENST00000580158	GNAS	Q5JWF2	1037 aa		7.39	□□□□□ -1.23
KPNB1-209	ENST00000580158	EP400NL	Q6ZTU2	488 aa		7.39	□□□□□ -1.23
KPNB1-209	ENST00000580158	FBXL6	Q8N531	539 aa		7.39	□□□□□ -1.23
KPNB1-209	ENST00000580158	NOL10	Q9BSC4	688 aa	Known RBP	7.39	□□□□□ -1.23
KPNB1-209	ENST00000580158	SEZ6L	Q9BYH1	1024 aa		7.39	□□□□□ -1.23
KPNB1-209	ENST00000580158	RPAP3	Q9H6T3	665 aa	Predicted RBP	7.39	□□□□□ -1.23
KPNB1-209	ENST00000580158	CTNNA3	Q9UI47	895 aa		7.39	□□□□□ -1.23
KPNB1-209	ENST00000580158	MUTYH	Q9UIF7	546 aa		7.39	□□□□□ -1.23
KPNB1-209	ENST00000580158	DIS3	Q9Y2L1	958 aa	Known RBP	7.39	□□□□□ -1.23
KPNB1-209	ENST00000580158	TRIP12	Q14669	1992 aa	Predicted RBP	7.39	□□□□□ -1.23
KPNB1-209	ENST00000580158	PTPRS	Q13332	1948 aa		7.39	□□□□□ -1.23
KPNB1-209	ENST00000580158	FOCAD	Q5VW36	1801 aa		7.38	□□□□□ -1.23
KPNB1-209	ENST00000580158	UMODL1	Q5DID0	1318 aa		7.38	□□□□□ -1.23
KPNB1-209	ENST00000580158	MED19	A0JLT2	244 aa	Predicted RBP	7.38	□□□□□ -1.23
KPNB1-209	ENST00000580158	PRR23A	A6NEV1	266 aa		7.38	□□□□□ -1.23
KPNB1-209	ENST00000580158		H0Y858	1186 aa		7.38	□□□□□ -1.23
KPNB1-209	ENST00000580158		H3BQ06	376 aa	Predicted RBP	7.38	□□□□□ -1.23
KPNB1-209	ENST00000580158	NR3C2	P08235	984 aa		7.38	□□□□□ -1.23
KPNB1-209	ENST00000580158	VSIG8	P0DPA2	414 aa		7.38	□□□□□ -1.23
KPNB1-209	ENST00000580158	TAL1	P17542	331 aa	Predicted RBP	7.38	□□□□□ -1.23
KPNB1-209	ENST00000580158	TTLL4	Q14679	1199 aa		7.38	□□□□□ -1.23
KPNB1-209	ENST00000580158	C4orf48	Q5BLP8	95 aa		7.38	□□□□□ -1.23
KPNB1-209	ENST00000580158	CCSAP	Q6IQ19	270 aa	Predicted RBP	7.38	□□□□□ -1.23
KPNB1-209	ENST00000580158	ATF7IP	Q6VMQ6	1270 aa		7.38	□□□□□ -1.23
KPNB1-209	ENST00000580158	ASCL5	Q7RTU5	278 aa		7.38	□□□□□ -1.23
KPNB1-209	ENST00000580158	DGLUCY	Q7Z3D6	616 aa		7.38	□□□□□ -1.23
KPNB1-209	ENST00000580158	HERC6	Q8IVU3	1022 aa		7.38	□□□□□ -1.23
KPNB1-209	ENST00000580158	TEX11	Q8IYF3	940 aa		7.38	□□□□□ -1.23
KPNB1-209	ENST00000580158	MB21D1	Q8N884	522 aa		7.38	□□□□□ -1.23
KPNB1-209	ENST00000580158	NEK9	Q8TD19	979 aa		7.38	□□□□□ -1.23
KPNB1-209	ENST00000580158	GDPD5	Q8WTR4	605 aa		7.38	□□□□□ -1.23
KPNB1-209	ENST00000580158	COL26A1	Q96A83	441 aa		7.38	□□□□□ -1.23
KPNB1-209	ENST00000580158	LENG1	Q96BZ8	264 aa	Predicted RBP	7.38	□□□□□ -1.23
KPNB1-209	ENST00000580158	SUCLG2	Q96I99	432 aa		7.38	□□□□□ -1.23
KPNB1-209	ENST00000580158	CNTNAP3B	Q96NU0	1288 aa		7.38	□□□□□ -1.23
KPNB1-209	ENST00000580158	MMP19	Q99542	508 aa		7.38	□□□□□ -1.23
KPNB1-209	ENST00000580158	CNTNAP3	Q9BZ76	1288 aa		7.38	□□□□□ -1.23
KPNB1-209	ENST00000580158	SLC24A3	Q9HC58	644 aa		7.38	□□□□□ -1.23
KPNB1-209	ENST00000580158	TLR9	Q9NR96	1032 aa		7.38	□□□□□ -1.23
KPNB1-209	ENST00000580158	BAHCC1	Q9P281	2608 aa		7.38	□□□□□ -1.23
KPNB1-209	ENST00000580158	RIF1	Q5UIP0	2472 aa	Known RBP	7.38	□□□□□ -1.23
KPNB1-209	ENST00000580158		F6X3S4	739 aa		7.37	□□□□□ -1.23
KPNB1-209	ENST00000580158	ALDH1L1	O75891	902 aa		7.37	□□□□□ -1.23
KPNB1-209	ENST00000580158	SLC25A27	O95847	323 aa		7.37	□□□□□ -1.23
KPNB1-209	ENST00000580158	HLA-DOA	P06340	250 aa		7.37	□□□□□ -1.23
KPNB1-209	ENST00000580158	KCNJ6	P48051	423 aa		7.37	□□□□□ -1.23
KPNB1-209	ENST00000580158	JAG1	P78504	1218 aa		7.37	□□□□□ -1.23
KPNB1-209	ENST00000580158	KCTD2	Q14681	263 aa		7.37	□□□□□ -1.23
KPNB1-209	ENST00000580158	RAB3GAP1	Q15042	981 aa		7.37	□□□□□ -1.23
KPNB1-209	ENST00000580158	DEFB128	Q7Z7B8	93 aa		7.37	□□□□□ -1.23
KPNB1-209	ENST00000580158	RNF135	Q8IUD6	432 aa		7.37	□□□□□ -1.23
KPNB1-209	ENST00000580158	SCLY	Q96I15	445 aa		7.37	□□□□□ -1.23
KPNB1-209	ENST00000580158	FSD1	Q9BTV5	496 aa		7.37	□□□□□ -1.23

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