RNA–Protein interactions for RNA: ENST00000580095.5

TOP3A-209, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 1 (best)

Gene TOP3A, Length 2,929 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-209ENST00000580095 RHOBTB3O94955 611 aa11.74□□□□□ -0.53
TOP3A-209ENST00000580095 MTIF2P46199 727 aaKnown RBP11.74□□□□□ -0.53
TOP3A-209ENST00000580095 TBC1D8BQ0IIM8 1120 aa11.74□□□□□ -0.53
TOP3A-209ENST00000580095 SRGAP1Q7Z6B7 1085 aa11.74□□□□□ -0.53
TOP3A-209ENST00000580095 CNOT6LQ96LI5 555 aaKnown RBP11.74□□□□□ -0.53
TOP3A-209ENST00000580095 CDC23Q9UJX2 597 aa11.74□□□□□ -0.53
TOP3A-209ENST00000580095 DAGLAQ9Y4D2 1042 aa11.74□□□□□ -0.53
TOP3A-209ENST00000580095 ITIH6Q6UXX5 1313 aa11.74□□□□□ -0.53
TOP3A-209ENST00000580095 CASZ1Q86V15 1759 aa11.74□□□□□ -0.53
TOP3A-209ENST00000580095 RASSF10A6NK89 507 aa11.73□□□□□ -0.53
TOP3A-209ENST00000580095 MPHOSPH10O00566 681 aaKnown RBP11.73□□□□□ -0.53
TOP3A-209ENST00000580095 CLGNO14967 610 aa11.73□□□□□ -0.53
TOP3A-209ENST00000580095 PLEKP08567 350 aaPredicted RBP11.73□□□□□ -0.53
TOP3A-209ENST00000580095 PDHBP11177 359 aa11.73□□□□□ -0.53
TOP3A-209ENST00000580095 GABPB1Q06547 395 aaPredicted RBP11.73□□□□□ -0.53
TOP3A-209ENST00000580095 RAD51AP2Q09MP3 1159 aa11.73□□□□□ -0.53
TOP3A-209ENST00000580095 STIM1Q13586 685 aa11.73□□□□□ -0.53
TOP3A-209ENST00000580095 KIAA0895Q8NCT3 520 aa11.73□□□□□ -0.53
TOP3A-209ENST00000580095 OR8K1Q8NGG5 319 aa11.73□□□□□ -0.53
TOP3A-209ENST00000580095 CAPZA3Q96KX2 299 aa11.73□□□□□ -0.53
TOP3A-209ENST00000580095 PYM1Q9BRP8 204 aaKnown RBP11.73□□□□□ -0.53
TOP3A-209ENST00000580095 CCSER1Q9C0I3 900 aa11.73□□□□□ -0.53
TOP3A-209ENST00000580095 ANKZF1Q9H8Y5 726 aa11.73□□□□□ -0.53
TOP3A-209ENST00000580095 ARFGAP3Q9NP61 516 aa11.73□□□□□ -0.53
TOP3A-209ENST00000580095 PCDHAC2Q9Y5I4 1007 aa11.73□□□□□ -0.53
TOP3A-209ENST00000580095 ROBO3Q96MS0 1386 aa11.73□□□□□ -0.53
TOP3A-209ENST00000580095 DDR1Q08345 913 aa11.73□□□□□ -0.53
TOP3A-209ENST00000580095 TMED8Q6PL24 325 aaPredicted RBP11.73□□□□□ -0.53
TOP3A-209ENST00000580095 KCTD1Q719H9 257 aa11.73□□□□□ -0.53
TOP3A-209ENST00000580095 KRT26Q7Z3Y9 468 aa11.73□□□□□ -0.53
TOP3A-209ENST00000580095 KRT25Q7Z3Z0 450 aa11.73□□□□□ -0.53
TOP3A-209ENST00000580095 KCNK18Q7Z418 384 aa11.73□□□□□ -0.53
TOP3A-209ENST00000580095 DAGLBQ8NCG7 672 aa11.73□□□□□ -0.53
TOP3A-209ENST00000580095 ZNF507Q8TCN5 953 aa11.73□□□□□ -0.53
TOP3A-209ENST00000580095 RABGGTAQ92696 567 aa11.73□□□□□ -0.53
TOP3A-209ENST00000580095 SPZ1Q9BXG8 430 aa11.73□□□□□ -0.53
TOP3A-209ENST00000580095 LACRTQ9GZZ8 138 aa11.73□□□□□ -0.53
TOP3A-209ENST00000580095 KANSL2Q9H9L4 492 aa11.73□□□□□ -0.53
TOP3A-209ENST00000580095 TTF2Q9UNY4 1162 aaKnown RBP11.73□□□□□ -0.53
TOP3A-209ENST00000580095 THSD7AQ9UPZ6 1657 aa11.73□□□□□ -0.53
TOP3A-209ENST00000580095 EPHB6O15197 1021 aa11.73□□□□□ -0.53
TOP3A-209ENST00000580095 EDIL3O43854 480 aa11.73□□□□□ -0.53
TOP3A-209ENST00000580095 SSBP05455 408 aaKnown RBP eCLIP11.73□□□□□ -0.53
TOP3A-209ENST00000580095 HERVK_113P62684 666 aa11.73□□□□□ -0.53
TOP3A-209ENST00000580095 CERS5Q8N5B7 392 aa11.73□□□□□ -0.53
TOP3A-209ENST00000580095 CCDC155Q8N6L0 562 aa11.73□□□□□ -0.53
TOP3A-209ENST00000580095 P2RX5Q93086 422 aa11.73□□□□□ -0.53
TOP3A-209ENST00000580095 NAPGQ99747 312 aaPredicted RBP11.73□□□□□ -0.53
TOP3A-209ENST00000580095 KCNQ5Q9NR82 932 aa11.73□□□□□ -0.53
TOP3A-209ENST00000580095 FAM207AQ9NSI2 230 aaPredicted RBP11.73□□□□□ -0.53
TOP3A-209ENST00000580095 TBC1D7Q9P0N9 293 aa11.73□□□□□ -0.53
TOP3A-209ENST00000580095 LRWD1Q9UFC0 647 aa11.73□□□□□ -0.53
TOP3A-209ENST00000580095 MYH8P13535 1937 aa11.72□□□□□ -0.53
TOP3A-209ENST00000580095 MACROD2A1Z1Q3 448 aa11.72□□□□□ -0.53
TOP3A-209ENST00000580095 MYMKA6NI61 221 aa11.72□□□□□ -0.53
TOP3A-209ENST00000580095 GNA11P29992 359 aa11.72□□□□□ -0.53
TOP3A-209ENST00000580095 ST5P78524 1137 aa11.72□□□□□ -0.53
TOP3A-209ENST00000580095 CACNB1Q02641 598 aaPredicted RBP11.72□□□□□ -0.53
TOP3A-209ENST00000580095 CALCRLQ16602 461 aa11.72□□□□□ -0.53
TOP3A-209ENST00000580095 LONRF2Q1L5Z9 754 aa11.72□□□□□ -0.53
TOP3A-209ENST00000580095 CCDC122Q5T0U0 273 aa11.72□□□□□ -0.53
TOP3A-209ENST00000580095 SMCR8Q8TEV9 937 aaPredicted RBP11.72□□□□□ -0.53
TOP3A-209ENST00000580095 CCDC51Q96ER9 411 aa11.72□□□□□ -0.53
TOP3A-209ENST00000580095 NOC4LQ9BVI4 516 aaKnown RBP11.72□□□□□ -0.53
TOP3A-209ENST00000580095 SEMA6BQ9H3T3 888 aa11.72□□□□□ -0.53
TOP3A-209ENST00000580095 ZNF287Q9HBT7 754 aa11.72□□□□□ -0.53
TOP3A-209ENST00000580095 PPP1R11O60927 126 aaPredicted RBP11.72□□□□□ -0.53
TOP3A-209ENST00000580095 ZMYND10O75800 440 aa11.72□□□□□ -0.53
TOP3A-209ENST00000580095 TAL1P17542 331 aaPredicted RBP11.72□□□□□ -0.53
TOP3A-209ENST00000580095 OAS2P29728 719 aaKnown RBP11.72□□□□□ -0.53
TOP3A-209ENST00000580095 SNAP25P60880 206 aa11.72□□□□□ -0.53
TOP3A-209ENST00000580095 TCP10Q12799 353 aa11.72□□□□□ -0.53
TOP3A-209ENST00000580095 GRB10Q13322 594 aa11.72□□□□□ -0.53
TOP3A-209ENST00000580095 KCNB1Q14721 858 aa11.72□□□□□ -0.53
TOP3A-209ENST00000580095 ZFPM1Q8IX07 1006 aa11.72□□□□□ -0.53
TOP3A-209ENST00000580095 DRC1Q96MC2 740 aa11.72□□□□□ -0.53
TOP3A-209ENST00000580095 GDAP1L1Q96MZ0 367 aa11.72□□□□□ -0.53
TOP3A-209ENST00000580095 FUT8Q9BYC5 575 aa11.72□□□□□ -0.53
TOP3A-209ENST00000580095 MTMR4Q9NYA4 1195 aa11.72□□□□□ -0.53
TOP3A-209ENST00000580095 ATP1A1P05023 1023 aaKnown RBP11.71□□□□□ -0.53
TOP3A-209ENST00000580095 IL1R1P14778 569 aa11.71□□□□□ -0.53
TOP3A-209ENST00000580095 CAPN2P17655 700 aa11.71□□□□□ -0.53
TOP3A-209ENST00000580095 MRPS25P82663 173 aaKnown RBP11.71□□□□□ -0.53
TOP3A-209ENST00000580095 SMC1AQ14683 1233 aaKnown RBP11.71□□□□□ -0.53
TOP3A-209ENST00000580095 ECM1Q16610 540 aa11.71□□□□□ -0.53
TOP3A-209ENST00000580095 TSR1Q2NL82 804 aaKnown RBP11.71□□□□□ -0.53
TOP3A-209ENST00000580095 BLOC1S4Q9NUP1 217 aa11.71□□□□□ -0.53
TOP3A-209ENST00000580095 ZNF219Q9P2Y4 722 aaPredicted RBP11.71□□□□□ -0.53
TOP3A-209ENST00000580095 ZNF185O15231 689 aa11.71□□□□□ -0.54
TOP3A-209ENST00000580095 ATP2B4P23634 1241 aa11.71□□□□□ -0.54
TOP3A-209ENST00000580095 EEF1GP26641 437 aaKnown RBP11.71□□□□□ -0.54
TOP3A-209ENST00000580095 VSNL1P62760 191 aa11.71□□□□□ -0.54
TOP3A-209ENST00000580095 FAM193AP78312 1265 aa11.71□□□□□ -0.54
TOP3A-209ENST00000580095 NFIAQ12857 509 aa11.71□□□□□ -0.54
TOP3A-209ENST00000580095 CCDC96Q2M329 555 aa11.71□□□□□ -0.54
TOP3A-209ENST00000580095 MEX3CQ5U5Q3 659 aaKnown RBP11.71□□□□□ -0.54
TOP3A-209ENST00000580095 GALNT17Q6IS24 598 aa11.71□□□□□ -0.54
TOP3A-209ENST00000580095 KIAA1328Q86T90 577 aa11.71□□□□□ -0.54
TOP3A-209ENST00000580095 FBXO41Q8TF61 875 aa11.71□□□□□ -0.54
TOP3A-209ENST00000580095 RBM17Q96I25 401 aaKnown RBP11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms