RNA–Protein interactions for RNA: ENST00000579640.5

SS18-213, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,840 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-213ENST00000579640 MYH15Q9Y2K3 1946 aa12.28□□□□□ -0.44
SS18-213ENST00000579640 SPDYE3A6NKU9 549 aa12.27□□□□□ -0.44
SS18-213ENST00000579640 CFBP00751 764 aa12.27□□□□□ -0.44
SS18-213ENST00000579640 TAL1P17542 331 aaPredicted RBP12.27□□□□□ -0.44
SS18-213ENST00000579640 MAP2K2P36507 400 aa12.27□□□□□ -0.44
SS18-213ENST00000579640 HSD17B4P51659 736 aa12.27□□□□□ -0.44
SS18-213ENST00000579640 NONOQ15233 471 aaKnown RBP eCLIP12.27□□□□□ -0.44
SS18-213ENST00000579640 UBE2SQ16763 222 aa12.27□□□□□ -0.44
SS18-213ENST00000579640 FAM110CQ1W6H9 321 aa12.27□□□□□ -0.44
SS18-213ENST00000579640 JAKMIP3Q5VZ66 844 aa12.27□□□□□ -0.44
SS18-213ENST00000579640 USP17L6PQ6QN14 398 aa12.27□□□□□ -0.44
SS18-213ENST00000579640 PIK3AP1Q6ZUJ8 805 aa12.27□□□□□ -0.44
SS18-213ENST00000579640 RASGRP4Q8TDF6 673 aa12.27□□□□□ -0.44
SS18-213ENST00000579640 MOV10L1Q9BXT6 1211 aaKnown RBP12.27□□□□□ -0.44
SS18-213ENST00000579640 MROH8Q9H579 483 aa12.27□□□□□ -0.44
SS18-213ENST00000579640 EHMT1Q9H9B1 1298 aa12.27□□□□□ -0.44
SS18-213ENST00000579640 HOMER2Q9NSB8 354 aa12.27□□□□□ -0.44
SS18-213ENST00000579640 CFAP45Q9UL16 551 aa12.27□□□□□ -0.44
SS18-213ENST00000579640 ADGRA2Q96PE1 1338 aa12.27□□□□□ -0.45
SS18-213ENST00000579640 NFIBO00712 420 aa12.27□□□□□ -0.45
SS18-213ENST00000579640 KRT85P78386 507 aa12.27□□□□□ -0.45
SS18-213ENST00000579640 MUM1L1Q5H9M0 696 aa12.27□□□□□ -0.45
SS18-213ENST00000579640 RNF207Q6ZRF8 634 aa12.27□□□□□ -0.45
SS18-213ENST00000579640 ADAMTS3O15072 1205 aa12.26□□□□□ -0.45
SS18-213ENST00000579640 TLR2O60603 784 aa12.26□□□□□ -0.45
SS18-213ENST00000579640 BAG4O95429 457 aaKnown RBP12.26□□□□□ -0.45
SS18-213ENST00000579640 ERCC3P19447 782 aa12.26□□□□□ -0.45
SS18-213ENST00000579640 Q3C1V9 767 aa12.26□□□□□ -0.45
SS18-213ENST00000579640 NCAPG2Q86XI2 1143 aa12.26□□□□□ -0.45
SS18-213ENST00000579640 ANKRD13CQ8N6S4 541 aa12.26□□□□□ -0.45
SS18-213ENST00000579640 ZIC5Q96T25 663 aa12.26□□□□□ -0.45
SS18-213ENST00000579640 ANO3Q9BYT9 981 aa12.26□□□□□ -0.45
SS18-213ENST00000579640 TMEM260Q9NX78 707 aa12.26□□□□□ -0.45
SS18-213ENST00000579640 PFASO15067 1338 aa12.26□□□□□ -0.45
SS18-213ENST00000579640 CA12O43570 354 aa12.25□□□□□ -0.45
SS18-213ENST00000579640 AOC2O75106 756 aa12.25□□□□□ -0.45
SS18-213ENST00000579640 HOXA13P31271 388 aaPredicted RBP12.25□□□□□ -0.45
SS18-213ENST00000579640 DNM1Q05193 864 aaKnown RBP12.25□□□□□ -0.45
SS18-213ENST00000579640 ORC2Q13416 577 aaPredicted RBP12.25□□□□□ -0.45
SS18-213ENST00000579640 EARS2Q5JPH6 523 aaKnown RBP12.25□□□□□ -0.45
SS18-213ENST00000579640 FAM173BQ6P4H8 233 aa12.25□□□□□ -0.45
SS18-213ENST00000579640 NSMFQ6X4W1 530 aa12.25□□□□□ -0.45
SS18-213ENST00000579640 TBC1D5Q92609 795 aa12.25□□□□□ -0.45
SS18-213ENST00000579640 NAP1L4Q99733 375 aaKnown RBP12.25□□□□□ -0.45
SS18-213ENST00000579640 THSD7BQ9C0I4 1608 aa12.25□□□□□ -0.45
SS18-213ENST00000579640 BMP15O95972 392 aa12.25□□□□□ -0.45
SS18-213ENST00000579640 BCRP11274 1271 aa12.25□□□□□ -0.45
SS18-213ENST00000579640 HSPA6P17066 643 aa12.25□□□□□ -0.45
SS18-213ENST00000579640 VEGFBP49765 207 aa12.25□□□□□ -0.45
SS18-213ENST00000579640 RPS6P62753 249 aaKnown RBP12.25□□□□□ -0.45
SS18-213ENST00000579640 CSPP1Q1MSJ5 1256 aa12.25□□□□□ -0.45
SS18-213ENST00000579640 INF2Q27J81 1249 aa12.25□□□□□ -0.45
SS18-213ENST00000579640 FOXD4L6Q3SYB3 417 aaPredicted RBP12.25□□□□□ -0.45
SS18-213ENST00000579640 FOXD4L3Q6VB84 417 aaPredicted RBP12.25□□□□□ -0.45
SS18-213ENST00000579640 NEK8Q86SG6 692 aa12.25□□□□□ -0.45
SS18-213ENST00000579640 CCAR1Q8IX12 1150 aaKnown RBP12.25□□□□□ -0.45
SS18-213ENST00000579640 SYTL5Q8TDW5 730 aaPredicted RBP12.25□□□□□ -0.45
SS18-213ENST00000579640 TBCKQ8TEA7 893 aa12.25□□□□□ -0.45
SS18-213ENST00000579640 SCAND2PQ9GZW5 306 aaPredicted RBP12.25□□□□□ -0.45
SS18-213ENST00000579640 A1CFQ9NQ94 594 aaKnown RBP12.25□□□□□ -0.45
SS18-213ENST00000579640 POLR3EQ9NVU0 708 aa12.25□□□□□ -0.45
SS18-213ENST00000579640 CYP39A1Q9NYL5 469 aa12.25□□□□□ -0.45
SS18-213ENST00000579640 FAM205CA6NFA0 338 aa12.24□□□□□ -0.45
SS18-213ENST00000579640 PEX10O60683 326 aa12.24□□□□□ -0.45
SS18-213ENST00000579640 NCLP19338 710 aaKnown RBP12.24□□□□□ -0.45
SS18-213ENST00000579640 MAPK4P31152 587 aa12.24□□□□□ -0.45
SS18-213ENST00000579640 SREBF1P36956 1147 aa12.24□□□□□ -0.45
SS18-213ENST00000579640 TOB1P50616 345 aaPredicted RBP12.24□□□□□ -0.45
SS18-213ENST00000579640 USP11P51784 963 aa12.24□□□□□ -0.45
SS18-213ENST00000579640 BAATQ14032 418 aaPredicted RBP12.24□□□□□ -0.45
SS18-213ENST00000579640 NOM1Q5C9Z4 860 aaKnown RBP12.24□□□□□ -0.45
SS18-213ENST00000579640 TTC38Q5R3I4 469 aa12.24□□□□□ -0.45
SS18-213ENST00000579640 ANO1Q5XXA6 986 aa12.24□□□□□ -0.45
SS18-213ENST00000579640 C17orf99Q6UX52 265 aa12.24□□□□□ -0.45
SS18-213ENST00000579640 FCHSD1Q86WN1 690 aa12.24□□□□□ -0.45
SS18-213ENST00000579640 ANKRD35Q8N283 1001 aa12.24□□□□□ -0.45
SS18-213ENST00000579640 USP28Q96RU2 1077 aa12.24□□□□□ -0.45
SS18-213ENST00000579640 RTEL1Q9NZ71 1219 aa12.24□□□□□ -0.45
SS18-213ENST00000579640 CEP131Q9UPN4 1083 aa12.24□□□□□ -0.45
SS18-213ENST00000579640 FRMPD4Q14CM0 1322 aa12.24□□□□□ -0.45
SS18-213ENST00000579640 GOLGA6L22H0YM25 854 aa12.23□□□□□ -0.45
SS18-213ENST00000579640 STRNO43815 780 aa12.23□□□□□ -0.45
SS18-213ENST00000579640 YEATS4O95619 227 aa12.23□□□□□ -0.45
SS18-213ENST00000579640 NASPP49321 788 aaPredicted RBP12.23□□□□□ -0.45
SS18-213ENST00000579640 CRHR2Q13324 411 aa12.23□□□□□ -0.45
SS18-213ENST00000579640 KCTD2Q14681 263 aa12.23□□□□□ -0.45
SS18-213ENST00000579640 MOXD1Q6UVY6 613 aa12.23□□□□□ -0.45
SS18-213ENST00000579640 SLC30A10Q6XR72 485 aa12.23□□□□□ -0.45
SS18-213ENST00000579640 ABRAQ8N0Z2 381 aa12.23□□□□□ -0.45
SS18-213ENST00000579640 PGBD1Q96JS3 809 aa12.23□□□□□ -0.45
SS18-213ENST00000579640 CFHR5Q9BXR6 569 aa12.23□□□□□ -0.45
SS18-213ENST00000579640 CPA4Q9UI42 421 aa12.23□□□□□ -0.45
SS18-213ENST00000579640 MORC2Q9Y6X9 1032 aaPredicted RBP12.23□□□□□ -0.45
SS18-213ENST00000579640 RPTORQ8N122 1335 aa12.23□□□□□ -0.45
SS18-213ENST00000579640 CYP3A4P08684 503 aa12.23□□□□□ -0.45
SS18-213ENST00000579640 FCER1AP12319 257 aa12.23□□□□□ -0.45
SS18-213ENST00000579640 GCFC2P16383 781 aaKnown RBP12.23□□□□□ -0.45
SS18-213ENST00000579640 ARHGAP4P98171 946 aa12.23□□□□□ -0.45
SS18-213ENST00000579640 DNERQ8NFT8 737 aa12.23□□□□□ -0.45
SS18-213ENST00000579640 CRYGNQ8WXF5 182 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms