RNA–Protein interactions for RNA: ENST00000579221.5

SLC6A4-205, Transcript of solute carrier family 6 member 4, humanhuman

TSL 1 (best)

Gene SLC6A4, Length 1,069 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-205ENST00000579221 PPP1R18Q6NYC8 613 aa17.92■□□□□ 0.46
SLC6A4-205ENST00000579221 SLAIN1Q8ND83 568 aa17.92■□□□□ 0.46
SLC6A4-205ENST00000579221 NSUN7Q8NE18 718 aaKnown RBP17.92■□□□□ 0.46
SLC6A4-205ENST00000579221 SNX21Q969T3 373 aa17.92■□□□□ 0.46
SLC6A4-205ENST00000579221 STK36Q9NRP7 1315 aa17.92■□□□□ 0.46
SLC6A4-205ENST00000579221 SMCO2A6NFE2 343 aa17.91■□□□□ 0.46
SLC6A4-205ENST00000579221 OPLAHO14841 1288 aa17.91■□□□□ 0.46
SLC6A4-205ENST00000579221 XBP1P17861 261 aa17.91■□□□□ 0.46
SLC6A4-205ENST00000579221 GRK4P32298 578 aa17.91■□□□□ 0.46
SLC6A4-205ENST00000579221 MRPL12P52815 198 aaKnown RBP17.91■□□□□ 0.46
SLC6A4-205ENST00000579221 ST3GAL1Q11201 340 aa17.91■□□□□ 0.46
SLC6A4-205ENST00000579221 FAM133AQ8N9E0 248 aa17.91■□□□□ 0.46
SLC6A4-205ENST00000579221 GLT8D2Q9H1C3 349 aa17.91■□□□□ 0.46
SLC6A4-205ENST00000579221 SH3GLB2Q9NR46 395 aa17.91■□□□□ 0.46
SLC6A4-205ENST00000579221 ADD3Q9UEY8 706 aaKnown RBP17.91■□□□□ 0.46
SLC6A4-205ENST00000579221 MGAMO43451 1857 aa17.9■□□□□ 0.46
SLC6A4-205ENST00000579221 HSD17B4P51659 736 aa17.9■□□□□ 0.46
SLC6A4-205ENST00000579221 CNTN2Q02246 1040 aa17.9■□□□□ 0.46
SLC6A4-205ENST00000579221 GHRHRQ02643 423 aa17.9■□□□□ 0.46
SLC6A4-205ENST00000579221 OLFML2BQ68BL8 750 aa17.9■□□□□ 0.46
SLC6A4-205ENST00000579221 SLC30A10Q6XR72 485 aa17.9■□□□□ 0.46
SLC6A4-205ENST00000579221 ZNF467Q7Z7K2 595 aaPredicted RBP17.9■□□□□ 0.46
SLC6A4-205ENST00000579221 TEX2Q8IWB9 1127 aa17.9■□□□□ 0.46
SLC6A4-205ENST00000579221 MSL3Q8N5Y2 521 aaKnown RBP17.9■□□□□ 0.46
SLC6A4-205ENST00000579221 CCDC148Q8NFR7 591 aa17.9■□□□□ 0.46
SLC6A4-205ENST00000579221 SMARCC2Q8TAQ2 1214 aa17.9■□□□□ 0.46
SLC6A4-205ENST00000579221 SYTL5Q8TDW5 730 aaPredicted RBP17.9■□□□□ 0.46
SLC6A4-205ENST00000579221 MAML3Q96JK9 1138 aa17.9■□□□□ 0.46
SLC6A4-205ENST00000579221 MCOLN1Q9GZU1 580 aa17.9■□□□□ 0.46
SLC6A4-205ENST00000579221 C6orf50Q9HD87 102 aa17.9■□□□□ 0.46
SLC6A4-205ENST00000579221 BIN2Q9UBW5 565 aaPredicted RBP17.9■□□□□ 0.46
SLC6A4-205ENST00000579221 PCNTO95613 3336 aa17.9■□□□□ 0.46
SLC6A4-205ENST00000579221 SOWAHBA6NEL2 793 aa17.89■□□□□ 0.45
SLC6A4-205ENST00000579221 B4DLN1 442 aa17.89■□□□□ 0.45
SLC6A4-205ENST00000579221 GNA11P29992 359 aa17.89■□□□□ 0.45
SLC6A4-205ENST00000579221 ADCY7P51828 1080 aa17.89■□□□□ 0.45
SLC6A4-205ENST00000579221 HMGN5P82970 282 aaKnown RBP17.89■□□□□ 0.45
SLC6A4-205ENST00000579221 CCL14Q16627 93 aa17.89■□□□□ 0.45
SLC6A4-205ENST00000579221 SLC9C1Q4G0N8 1177 aa17.89■□□□□ 0.45
SLC6A4-205ENST00000579221 MFSD14CQ5VZR4 134 aa17.89■□□□□ 0.45
SLC6A4-205ENST00000579221 FAM177A1Q8N128 213 aaPredicted RBP17.89■□□□□ 0.45
SLC6A4-205ENST00000579221 DNERQ8NFT8 737 aa17.89■□□□□ 0.45
SLC6A4-205ENST00000579221 MPHOSPH6Q99547 160 aaKnown RBP17.89■□□□□ 0.45
SLC6A4-205ENST00000579221 RIC8AQ9NPQ8 531 aa17.89■□□□□ 0.45
SLC6A4-205ENST00000579221 BAZ2BQ9UIF8 2168 aaKnown RBP17.89■□□□□ 0.45
SLC6A4-205ENST00000579221 ZSWIM8A7E2V4 1837 aa17.88■□□□□ 0.45
SLC6A4-205ENST00000579221 LOC102724159A0A0B4J2E5 919 aa17.88■□□□□ 0.45
SLC6A4-205ENST00000579221 ASB14A6NK59 587 aa17.88■□□□□ 0.45
SLC6A4-205ENST00000579221 K7ELQ4 463 aaPredicted RBP17.88■□□□□ 0.45
SLC6A4-205ENST00000579221 PIK3CDO00329 1044 aa17.88■□□□□ 0.45
SLC6A4-205ENST00000579221 JAK2O60674 1132 aa17.88■□□□□ 0.45
SLC6A4-205ENST00000579221 FDPSP14324 419 aaKnown RBP17.88■□□□□ 0.45
SLC6A4-205ENST00000579221 ELNP15502 786 aa17.88■□□□□ 0.45
SLC6A4-205ENST00000579221 HOXA13P31271 388 aaPredicted RBP17.88■□□□□ 0.45
SLC6A4-205ENST00000579221 NLRP5P59047 1200 aa17.88■□□□□ 0.45
SLC6A4-205ENST00000579221 PWP2Q15269 919 aaKnown RBP17.88■□□□□ 0.45
SLC6A4-205ENST00000579221 COL13A1Q5TAT6 717 aaPredicted RBP17.88■□□□□ 0.45
SLC6A4-205ENST00000579221 TYW1BQ6NUM6 668 aa17.88■□□□□ 0.45
SLC6A4-205ENST00000579221 HSCBQ8IWL3 235 aa17.88■□□□□ 0.45
SLC6A4-205ENST00000579221 FAM184AQ8NB25 1140 aa17.88■□□□□ 0.45
SLC6A4-205ENST00000579221 TRIB2Q92519 343 aa17.88■□□□□ 0.45
SLC6A4-205ENST00000579221 TAAR1Q96RJ0 339 aa17.88■□□□□ 0.45
SLC6A4-205ENST00000579221 ALG1Q9BT22 464 aa17.88■□□□□ 0.45
SLC6A4-205ENST00000579221 ZMYND12Q9H0C1 365 aa17.88■□□□□ 0.45
SLC6A4-205ENST00000579221 FLRT1Q9NZU1 646 aa17.88■□□□□ 0.45
SLC6A4-205ENST00000579221 VPS54Q9P1Q0 977 aa17.88■□□□□ 0.45
SLC6A4-205ENST00000579221 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.88■□□□□ 0.45
SLC6A4-205ENST00000579221 ESYT2A0FGR8 921 aa17.87■□□□□ 0.45
SLC6A4-205ENST00000579221 MEIS2O14770 477 aa17.87■□□□□ 0.45
SLC6A4-205ENST00000579221 DTNBO60941 627 aa17.87■□□□□ 0.45
SLC6A4-205ENST00000579221 HMGCRP04035 888 aa17.87■□□□□ 0.45
SLC6A4-205ENST00000579221 UBXN2AP68543 259 aa17.87■□□□□ 0.45
SLC6A4-205ENST00000579221 ARHGEF16Q5VV41 709 aa17.87■□□□□ 0.45
SLC6A4-205ENST00000579221 USP17L6PQ6QN14 398 aa17.87■□□□□ 0.45
SLC6A4-205ENST00000579221 MAMDC4Q6UXC1 1216 aa17.87■□□□□ 0.45
SLC6A4-205ENST00000579221 FCHSD1Q86WN1 690 aa17.87■□□□□ 0.45
SLC6A4-205ENST00000579221 BICD2Q8TD16 824 aa17.87■□□□□ 0.45
SLC6A4-205ENST00000579221 NSUN6Q8TEA1 469 aaKnown RBP17.87■□□□□ 0.45
SLC6A4-205ENST00000579221 PURBQ96QR8 312 aaKnown RBP17.87■□□□□ 0.45
SLC6A4-205ENST00000579221 RMDN3Q96TC7 470 aa17.87■□□□□ 0.45
SLC6A4-205ENST00000579221 TINF2Q9BSI4 451 aa17.87■□□□□ 0.45
SLC6A4-205ENST00000579221 ALDH5A1P51649 535 aaPredicted RBP17.86■□□□□ 0.45
SLC6A4-205ENST00000579221 CUL4AQ13619 759 aa17.86■□□□□ 0.45
SLC6A4-205ENST00000579221 TRIM29Q14134 588 aa17.86■□□□□ 0.45
SLC6A4-205ENST00000579221 MCTP2Q6DN12 878 aa17.86■□□□□ 0.45
SLC6A4-205ENST00000579221 GALNT17Q6IS24 598 aa17.86■□□□□ 0.45
SLC6A4-205ENST00000579221 SH3TC2Q8TF17 1288 aa17.86■□□□□ 0.45
SLC6A4-205ENST00000579221 AIFM3Q96NN9 605 aa17.86■□□□□ 0.45
SLC6A4-205ENST00000579221 IWS1Q96ST2 819 aa17.86■□□□□ 0.45
SLC6A4-205ENST00000579221 COL20A1Q9P218 1284 aa17.86■□□□□ 0.45
SLC6A4-205ENST00000579221 KIF3AQ9Y496 699 aa17.86■□□□□ 0.45
SLC6A4-205ENST00000579221 PLXNB2O15031 1838 aa17.86■□□□□ 0.45
SLC6A4-205ENST00000579221 ZNF236Q9UL36 1845 aa17.86■□□□□ 0.45
SLC6A4-205ENST00000579221 FOSP01100 380 aaPredicted RBP17.85■□□□□ 0.45
SLC6A4-205ENST00000579221 IGHA2P01877 340 aa17.85■□□□□ 0.45
SLC6A4-205ENST00000579221 CYP2C19P33261 490 aa17.85■□□□□ 0.45
SLC6A4-205ENST00000579221 UBE2SQ16763 222 aa17.85■□□□□ 0.45
SLC6A4-205ENST00000579221 FGD4Q96M96 766 aa17.85■□□□□ 0.45
SLC6A4-205ENST00000579221 SYNGAP1Q96PV0 1343 aa17.85■□□□□ 0.45
SLC6A4-205ENST00000579221 EHMT1Q9H9B1 1298 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms