RNA–Protein interactions for RNA: ENST00000579211.1

ITGB4-205, Transcript of integrin subunit beta 4, humanhuman

TSL 2

Gene ITGB4, Length 411 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-205ENST00000579211 RAB11FIP4Q86YS3 637 aa20.28■□□□□ 0.84
ITGB4-205ENST00000579211 RGS22Q8NE09 1264 aa20.28■□□□□ 0.84
ITGB4-205ENST00000579211 RRP36Q96EU6 259 aaKnown RBP20.28■□□□□ 0.84
ITGB4-205ENST00000579211 RIOX1Q9H6W3 641 aa20.28■□□□□ 0.84
ITGB4-205ENST00000579211 SPC25Q9HBM1 224 aa20.28■□□□□ 0.84
ITGB4-205ENST00000579211 SEC63Q9UGP8 760 aaKnown RBP20.28■□□□□ 0.84
ITGB4-205ENST00000579211 SNX14Q9Y5W7 946 aa20.28■□□□□ 0.84
ITGB4-205ENST00000579211 PNMA6FA0A0J9YX94 578 aa20.27■□□□□ 0.84
ITGB4-205ENST00000579211 CFBP00751 764 aa20.27■□□□□ 0.84
ITGB4-205ENST00000579211 EXOSC10Q01780 885 aaKnown RBP20.27■□□□□ 0.84
ITGB4-205ENST00000579211 PDE4DQ08499 809 aa20.27■□□□□ 0.84
ITGB4-205ENST00000579211 MICU3Q86XE3 530 aa20.27■□□□□ 0.84
ITGB4-205ENST00000579211 LOC102724159A0A0B4J2E5 919 aa20.26■□□□□ 0.83
ITGB4-205ENST00000579211 EPB41L2O43491 1005 aaKnown RBP20.26■□□□□ 0.83
ITGB4-205ENST00000579211 PGK1P00558 417 aa20.26■□□□□ 0.83
ITGB4-205ENST00000579211 MNX1P50219 401 aaPredicted RBP20.26■□□□□ 0.83
ITGB4-205ENST00000579211 COL9A3Q14050 684 aaPredicted RBP20.26■□□□□ 0.83
ITGB4-205ENST00000579211 PWP2Q15269 919 aaKnown RBP20.26■□□□□ 0.83
ITGB4-205ENST00000579211 SGMS1Q86VZ5 419 aa20.26■□□□□ 0.83
ITGB4-205ENST00000579211 FANCBQ8NB91 859 aa20.26■□□□□ 0.83
ITGB4-205ENST00000579211 MTMR8Q96EF0 704 aa20.26■□□□□ 0.83
ITGB4-205ENST00000579211 MAF1Q9H063 256 aa20.26■□□□□ 0.83
ITGB4-205ENST00000579211 ZBTB43O43298 467 aa20.25■□□□□ 0.83
ITGB4-205ENST00000579211 EIF5BO60841 1220 aaKnown RBP20.25■□□□□ 0.83
ITGB4-205ENST00000579211 CASTP20810 708 aaKnown RBP20.25■□□□□ 0.83
ITGB4-205ENST00000579211 TNFAIP2Q03169 654 aa20.25■□□□□ 0.83
ITGB4-205ENST00000579211 LRRC41Q15345 812 aa20.25■□□□□ 0.83
ITGB4-205ENST00000579211 Q6ZUG5 572 aa20.25■□□□□ 0.83
ITGB4-205ENST00000579211 CCDC82Q8N4S0 544 aa20.25■□□□□ 0.83
ITGB4-205ENST00000579211 DNERQ8NFT8 737 aa20.25■□□□□ 0.83
ITGB4-205ENST00000579211 TBC1D5Q92609 795 aa20.25■□□□□ 0.83
ITGB4-205ENST00000579211 KCNB2Q92953 911 aa20.25■□□□□ 0.83
ITGB4-205ENST00000579211 LENG1Q96BZ8 264 aaPredicted RBP20.25■□□□□ 0.83
ITGB4-205ENST00000579211 SPZ1Q9BXG8 430 aa20.25■□□□□ 0.83
ITGB4-205ENST00000579211 VTA1Q9NP79 307 aa20.25■□□□□ 0.83
ITGB4-205ENST00000579211 KLF18A0A0U1RQI7 1052 aa20.24■□□□□ 0.83
ITGB4-205ENST00000579211 CYTH3O43739 400 aa20.24■□□□□ 0.83
ITGB4-205ENST00000579211 DUSP11O75319 330 aaKnown RBP20.24■□□□□ 0.83
ITGB4-205ENST00000579211 CPA1P15085 419 aa20.24■□□□□ 0.83
ITGB4-205ENST00000579211 SMARCA1P28370 1054 aa20.24■□□□□ 0.83
ITGB4-205ENST00000579211 ARHGEF16Q5VV41 709 aa20.24■□□□□ 0.83
ITGB4-205ENST00000579211 FBXO16Q8IX29 292 aaPredicted RBP20.24■□□□□ 0.83
ITGB4-205ENST00000579211 CMTR1Q8N1G2 835 aaKnown RBP20.24■□□□□ 0.83
ITGB4-205ENST00000579211 USP26Q9BXU7 913 aa20.24■□□□□ 0.83
ITGB4-205ENST00000579211 RBM28Q9NW13 759 aaKnown RBP20.24■□□□□ 0.83
ITGB4-205ENST00000579211 DDX49Q9Y6V7 483 aaKnown RBP20.24■□□□□ 0.83
ITGB4-205ENST00000579211 PLEKHA8P1O95397 391 aa20.23■□□□□ 0.83
ITGB4-205ENST00000579211 C6orf222P0C671 652 aaPredicted RBP20.23■□□□□ 0.83
ITGB4-205ENST00000579211 COL6A1P12109 1028 aa20.23■□□□□ 0.83
ITGB4-205ENST00000579211 ADCYAP1R1P41586 468 aa20.23■□□□□ 0.83
ITGB4-205ENST00000579211 ATN1P54259 1190 aaPredicted RBP20.23■□□□□ 0.83
ITGB4-205ENST00000579211 IQSEC1Q6DN90 963 aa20.23■□□□□ 0.83
ITGB4-205ENST00000579211 C7orf61Q8IZ16 206 aa20.23■□□□□ 0.83
ITGB4-205ENST00000579211 NSUN6Q8TEA1 469 aaKnown RBP20.23■□□□□ 0.83
ITGB4-205ENST00000579211 FERMT2Q96AC1 680 aa20.23■□□□□ 0.83
ITGB4-205ENST00000579211 TAAR1Q96RJ0 339 aa20.23■□□□□ 0.83
ITGB4-205ENST00000579211 RMDN3Q96TC7 470 aa20.23■□□□□ 0.83
ITGB4-205ENST00000579211 AP5M1Q9H0R1 490 aa20.23■□□□□ 0.83
ITGB4-205ENST00000579211 ASTN1O14525 1302 aa20.23■□□□□ 0.83
ITGB4-205ENST00000579211 H0YGN5 161 aa20.22■□□□□ 0.83
ITGB4-205ENST00000579211 PPP1R11O60927 126 aaPredicted RBP20.22■□□□□ 0.83
ITGB4-205ENST00000579211 RTN1Q16799 776 aa20.22■□□□□ 0.83
ITGB4-205ENST00000579211 APOA5Q6Q788 366 aa20.22■□□□□ 0.83
ITGB4-205ENST00000579211 SRBD1Q8N5C6 995 aaKnown RBP20.22■□□□□ 0.83
ITGB4-205ENST00000579211 SAMD3Q8N6K7 520 aa20.22■□□□□ 0.83
ITGB4-205ENST00000579211 SYTL5Q8TDW5 730 aaPredicted RBP20.22■□□□□ 0.83
ITGB4-205ENST00000579211 MAP3K20Q9NYL2 800 aaKnown RBP20.22■□□□□ 0.83
ITGB4-205ENST00000579211 SYNRGQ9UMZ2 1314 aa20.22■□□□□ 0.83
ITGB4-205ENST00000579211 GOLGA8AA7E2F4 631 aa20.21■□□□□ 0.83
ITGB4-205ENST00000579211 GOLGA8BA8MQT2 603 aa20.21■□□□□ 0.83
ITGB4-205ENST00000579211 GCOM1H8Y6P7 765 aaPredicted RBP20.21■□□□□ 0.83
ITGB4-205ENST00000579211 POLR2MP0CAP2 368 aa20.21■□□□□ 0.83
ITGB4-205ENST00000579211 RPS6KB1P23443 525 aa20.21■□□□□ 0.83
ITGB4-205ENST00000579211 SLC35G1Q2M3R5 365 aa20.21■□□□□ 0.83
ITGB4-205ENST00000579211 PCSK9Q8NBP7 692 aaKnown RBP20.21■□□□□ 0.83
ITGB4-205ENST00000579211 MORC4Q8TE76 937 aa20.21■□□□□ 0.83
ITGB4-205ENST00000579211 BRF1Q92994 677 aa20.21■□□□□ 0.83
ITGB4-205ENST00000579211 CUL5Q93034 780 aa20.21■□□□□ 0.83
ITGB4-205ENST00000579211 VTI1AQ96AJ9 217 aa20.21■□□□□ 0.83
ITGB4-205ENST00000579211 KATNBL1Q9H079 304 aa20.21■□□□□ 0.83
ITGB4-205ENST00000579211 PDGFCQ9NRA1 345 aa20.21■□□□□ 0.83
ITGB4-205ENST00000579211 BRPF3Q9ULD4 1205 aa20.21■□□□□ 0.83
ITGB4-205ENST00000579211 CYP46A1Q9Y6A2 500 aa20.21■□□□□ 0.83
ITGB4-205ENST00000579211 DNAH12Q6ZR08 3092 aa20.2■□□□□ 0.82
ITGB4-205ENST00000579211 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.2■□□□□ 0.82
ITGB4-205ENST00000579211 EIF2AK2P19525 551 aaKnown RBP20.2■□□□□ 0.82
ITGB4-205ENST00000579211 HOXA13P31271 388 aaPredicted RBP20.2■□□□□ 0.82
ITGB4-205ENST00000579211 APOBRQ0VD83 1088 aa20.2■□□□□ 0.82
ITGB4-205ENST00000579211 GNASQ5JWF2 1037 aa20.2■□□□□ 0.82
ITGB4-205ENST00000579211 TAPT1Q6NXT6 567 aa20.2■□□□□ 0.82
ITGB4-205ENST00000579211 TMTC3Q6ZXV5 915 aa20.2■□□□□ 0.82
ITGB4-205ENST00000579211 IWS1Q96ST2 819 aa20.2■□□□□ 0.82
ITGB4-205ENST00000579211 TSEN34Q9BSV6 310 aaKnown RBP20.2■□□□□ 0.82
ITGB4-205ENST00000579211 WDR11Q9BZH6 1224 aa20.2■□□□□ 0.82
ITGB4-205ENST00000579211 DYNC1LI2O43237 492 aaPredicted RBP20.19■□□□□ 0.82
ITGB4-205ENST00000579211 ADAMTS4O75173 837 aa20.19■□□□□ 0.82
ITGB4-205ENST00000579211 SMPD1P17405 629 aa20.19■□□□□ 0.82
ITGB4-205ENST00000579211 METAP2P50579 478 aaKnown RBP eCLIP20.19■□□□□ 0.82
ITGB4-205ENST00000579211 GJA9P57773 515 aa20.19■□□□□ 0.82
ITGB4-205ENST00000579211 STXBP2Q15833 593 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms