RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 MAP3K14Q99558 947 aa7.59□□□□□ -1.19
TRAF4-213ENST00000578917 ATP11BQ9Y2G3 1177 aa7.59□□□□□ -1.19
TRAF4-213ENST00000578917 MKI67P46013 3256 aaKnown RBP7.58□□□□□ -1.2
TRAF4-213ENST00000578917 MYH8P13535 1937 aa7.58□□□□□ -1.2
TRAF4-213ENST00000578917 KLF18A0A0U1RQI7 1052 aa7.58□□□□□ -1.2
TRAF4-213ENST00000578917 CCDC196A0A1B0GTZ2 297 aa7.58□□□□□ -1.2
TRAF4-213ENST00000578917 GCOM1H8Y6P7 765 aaPredicted RBP7.58□□□□□ -1.2
TRAF4-213ENST00000578917 ZBTB43O43298 467 aa7.58□□□□□ -1.2
TRAF4-213ENST00000578917 DUSP11O75319 330 aaKnown RBP7.58□□□□□ -1.2
TRAF4-213ENST00000578917 IGHA2P01877 340 aa7.58□□□□□ -1.2
TRAF4-213ENST00000578917 POLR2MP0CAP2 368 aa7.58□□□□□ -1.2
TRAF4-213ENST00000578917 CASTP20810 708 aaKnown RBP7.58□□□□□ -1.2
TRAF4-213ENST00000578917 HSPA4P34932 840 aa7.58□□□□□ -1.2
TRAF4-213ENST00000578917 ALDH5A1P51649 535 aaPredicted RBP7.58□□□□□ -1.2
TRAF4-213ENST00000578917 EXOSC10Q01780 885 aaKnown RBP7.58□□□□□ -1.2
TRAF4-213ENST00000578917 KCNA10Q16322 511 aa7.58□□□□□ -1.2
TRAF4-213ENST00000578917 ADCK5Q3MIX3 580 aa7.58□□□□□ -1.2
TRAF4-213ENST00000578917 BRDTQ58F21 947 aaPredicted RBP7.58□□□□□ -1.2
TRAF4-213ENST00000578917 FCHSD1Q86WN1 690 aa7.58□□□□□ -1.2
TRAF4-213ENST00000578917 FBXO16Q8IX29 292 aaPredicted RBP7.58□□□□□ -1.2
TRAF4-213ENST00000578917 CMTR1Q8N1G2 835 aaKnown RBP7.58□□□□□ -1.2
TRAF4-213ENST00000578917 PCSK9Q8NBP7 692 aaKnown RBP7.58□□□□□ -1.2
TRAF4-213ENST00000578917 DNERQ8NFT8 737 aa7.58□□□□□ -1.2
TRAF4-213ENST00000578917 TBC1D5Q92609 795 aa7.58□□□□□ -1.2
TRAF4-213ENST00000578917 CUL5Q93034 780 aa7.58□□□□□ -1.2
TRAF4-213ENST00000578917 LENG1Q96BZ8 264 aaPredicted RBP7.58□□□□□ -1.2
TRAF4-213ENST00000578917 TAAR1Q96RJ0 339 aa7.58□□□□□ -1.2
TRAF4-213ENST00000578917 WDR11Q9BZH6 1224 aa7.58□□□□□ -1.2
TRAF4-213ENST00000578917 RIOX1Q9H6W3 641 aa7.58□□□□□ -1.2
TRAF4-213ENST00000578917 VTA1Q9NP79 307 aa7.58□□□□□ -1.2
TRAF4-213ENST00000578917 PDGFCQ9NRA1 345 aa7.58□□□□□ -1.2
TRAF4-213ENST00000578917 ZMYND8Q9ULU4 1186 aaPredicted RBP7.58□□□□□ -1.2
TRAF4-213ENST00000578917 SNX14Q9Y5W7 946 aa7.58□□□□□ -1.2
TRAF4-213ENST00000578917 CYP46A1Q9Y6A2 500 aa7.58□□□□□ -1.2
TRAF4-213ENST00000578917 DDX49Q9Y6V7 483 aaKnown RBP7.58□□□□□ -1.2
TRAF4-213ENST00000578917 LOC102724159A0A0B4J2E5 919 aa7.57□□□□□ -1.2
TRAF4-213ENST00000578917 hCG_1642624A0A1W2PR95 340 aa7.57□□□□□ -1.2
TRAF4-213ENST00000578917 GOLGA8AA7E2F4 631 aa7.57□□□□□ -1.2
TRAF4-213ENST00000578917 GOLGA8BA8MQT2 603 aa7.57□□□□□ -1.2
TRAF4-213ENST00000578917 TXNP10599 105 aaKnown RBP7.57□□□□□ -1.2
TRAF4-213ENST00000578917 COL6A1P12109 1028 aa7.57□□□□□ -1.2
TRAF4-213ENST00000578917 MYCLP12524 364 aaPredicted RBP7.57□□□□□ -1.2
TRAF4-213ENST00000578917 CPA1P15085 419 aa7.57□□□□□ -1.2
TRAF4-213ENST00000578917 EIF2AK2P19525 551 aaKnown RBP7.57□□□□□ -1.2
TRAF4-213ENST00000578917 SMARCA1P28370 1054 aa7.57□□□□□ -1.2
TRAF4-213ENST00000578917 HOXA13P31271 388 aaPredicted RBP7.57□□□□□ -1.2
TRAF4-213ENST00000578917 MNX1P50219 401 aaPredicted RBP7.57□□□□□ -1.2
TRAF4-213ENST00000578917 ACLYP53396 1101 aa7.57□□□□□ -1.2
TRAF4-213ENST00000578917 CHMP4BP1P59074 171 aa7.57□□□□□ -1.2
TRAF4-213ENST00000578917 AKAP17AQ02040 695 aaKnown RBP7.57□□□□□ -1.2
TRAF4-213ENST00000578917 PWP2Q15269 919 aaKnown RBP7.57□□□□□ -1.2
TRAF4-213ENST00000578917 STXBP2Q15833 593 aa7.57□□□□□ -1.2
TRAF4-213ENST00000578917 RTN1Q16799 776 aa7.57□□□□□ -1.2
TRAF4-213ENST00000578917 LRRC26Q2I0M4 334 aa7.57□□□□□ -1.2
TRAF4-213ENST00000578917 SEPT14Q6ZU15 432 aa7.57□□□□□ -1.2
TRAF4-213ENST00000578917 Q6ZUG5 572 aa7.57□□□□□ -1.2
TRAF4-213ENST00000578917 HEATR3Q7Z4Q2 680 aa7.57□□□□□ -1.2
TRAF4-213ENST00000578917 SGMS1Q86VZ5 419 aa7.57□□□□□ -1.2
TRAF4-213ENST00000578917 SRBD1Q8N5C6 995 aaKnown RBP7.57□□□□□ -1.2
TRAF4-213ENST00000578917 SMARCC2Q8TAQ2 1214 aa7.57□□□□□ -1.2
TRAF4-213ENST00000578917 SYTL5Q8TDW5 730 aaPredicted RBP7.57□□□□□ -1.2
TRAF4-213ENST00000578917 SCFD2Q8WU76 684 aa7.57□□□□□ -1.2
TRAF4-213ENST00000578917 BRF1Q92994 677 aa7.57□□□□□ -1.2
TRAF4-213ENST00000578917 GLT1D1Q96MS3 346 aa7.57□□□□□ -1.2
TRAF4-213ENST00000578917 IWS1Q96ST2 819 aa7.57□□□□□ -1.2
TRAF4-213ENST00000578917 LBHD1Q9BQE6 289 aaPredicted RBP7.57□□□□□ -1.2
TRAF4-213ENST00000578917 TSEN34Q9BSV6 310 aaKnown RBP7.57□□□□□ -1.2
TRAF4-213ENST00000578917 SPZ1Q9BXG8 430 aa7.57□□□□□ -1.2
TRAF4-213ENST00000578917 MAF1Q9H063 256 aa7.57□□□□□ -1.2
TRAF4-213ENST00000578917 PSTPIP2Q9H939 334 aa7.57□□□□□ -1.2
TRAF4-213ENST00000578917 RBM28Q9NW13 759 aaKnown RBP7.57□□□□□ -1.2
TRAF4-213ENST00000578917 MAP3K20Q9NYL2 800 aaKnown RBP7.57□□□□□ -1.2
TRAF4-213ENST00000578917 V9GY48 417 aaPredicted RBP7.57□□□□□ -1.2
TRAF4-213ENST00000578917 DOCK3Q8IZD9 2030 aa7.57□□□□□ -1.2
TRAF4-213ENST00000578917 BRCA2P51587 3418 aa7.56□□□□□ -1.2
TRAF4-213ENST00000578917 SYNRGQ9UMZ2 1314 aa7.56□□□□□ -1.2
TRAF4-213ENST00000578917 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.56□□□□□ -1.2
TRAF4-213ENST00000578917 DCDC2CA8MYV0 355 aa7.56□□□□□ -1.2
TRAF4-213ENST00000578917 EPB41L2O43491 1005 aaKnown RBP7.56□□□□□ -1.2
TRAF4-213ENST00000578917 CYTH3O43739 400 aa7.56□□□□□ -1.2
TRAF4-213ENST00000578917 PQBP1O60828 265 aaKnown RBP7.56□□□□□ -1.2
TRAF4-213ENST00000578917 PPP1R11O60927 126 aaPredicted RBP7.56□□□□□ -1.2
TRAF4-213ENST00000578917 EIF3JO75822 258 aaKnown RBP7.56□□□□□ -1.2
TRAF4-213ENST00000578917 PLEKHA8P1O95397 391 aa7.56□□□□□ -1.2
TRAF4-213ENST00000578917 ASGR1P07306 291 aa7.56□□□□□ -1.2
TRAF4-213ENST00000578917 NR3C2P08235 984 aa7.56□□□□□ -1.2
TRAF4-213ENST00000578917 SMPD1P17405 629 aa7.56□□□□□ -1.2
TRAF4-213ENST00000578917 SYN1P17600 705 aa7.56□□□□□ -1.2
TRAF4-213ENST00000578917 METAP2P50579 478 aaKnown RBP eCLIP7.56□□□□□ -1.2
TRAF4-213ENST00000578917 BEX3Q00994 111 aa7.56□□□□□ -1.2
TRAF4-213ENST00000578917 APOBRQ0VD83 1088 aa7.56□□□□□ -1.2
TRAF4-213ENST00000578917 TTLL4Q14679 1199 aa7.56□□□□□ -1.2
TRAF4-213ENST00000578917 PPP2R5BQ15173 497 aa7.56□□□□□ -1.2
TRAF4-213ENST00000578917 FSCN1Q16658 493 aaKnown RBP7.56□□□□□ -1.2
TRAF4-213ENST00000578917 APOA5Q6Q788 366 aa7.56□□□□□ -1.2
TRAF4-213ENST00000578917 CHRDL2Q6WN34 429 aa7.56□□□□□ -1.2
TRAF4-213ENST00000578917 SLC39A5Q6ZMH5 540 aa7.56□□□□□ -1.2
TRAF4-213ENST00000578917 TLK2Q86UE8 772 aa7.56□□□□□ -1.2
TRAF4-213ENST00000578917 SAMD3Q8N6K7 520 aa7.56□□□□□ -1.2
TRAF4-213ENST00000578917 MTMR8Q96EF0 704 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms