RNA–Protein interactions for RNA: ENST00000578904.1

CSNK1D-209, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-209ENST00000578904 SP3Q02447 781 aa15.94■□□□□ 0.14
CSNK1D-209ENST00000578904 Q3C1V9 767 aa15.94■□□□□ 0.14
CSNK1D-209ENST00000578904 USH1GQ495M9 461 aa15.94■□□□□ 0.14
CSNK1D-209ENST00000578904 RILPL1Q5EBL4 403 aa15.94■□□□□ 0.14
CSNK1D-209ENST00000578904 WDR78Q5VTH9 848 aa15.94■□□□□ 0.14
CSNK1D-209ENST00000578904 NCAPG2Q86XI2 1143 aa15.94■□□□□ 0.14
CSNK1D-209ENST00000578904 RIOX2Q8IUF8 465 aa15.94■□□□□ 0.14
CSNK1D-209ENST00000578904 CUL5Q93034 780 aa15.94■□□□□ 0.14
CSNK1D-209ENST00000578904 AGBL1Q96MI9 1066 aa15.94■□□□□ 0.14
CSNK1D-209ENST00000578904 MOV10L1Q9BXT6 1211 aaKnown RBP15.94■□□□□ 0.14
CSNK1D-209ENST00000578904 PCDHA1Q9Y5I3 950 aa15.94■□□□□ 0.14
CSNK1D-209ENST00000578904 CCDC194A0A1B0GVG4 234 aa15.93■□□□□ 0.14
CSNK1D-209ENST00000578904 BTBD18B2RXH4 712 aa15.93■□□□□ 0.14
CSNK1D-209ENST00000578904 FKTNO75072 461 aa15.93■□□□□ 0.14
CSNK1D-209ENST00000578904 ECM2O94769 699 aaPredicted RBP15.93■□□□□ 0.14
CSNK1D-209ENST00000578904 SLC25A27O95847 323 aa15.93■□□□□ 0.14
CSNK1D-209ENST00000578904 ALAS1P13196 640 aa15.93■□□□□ 0.14
CSNK1D-209ENST00000578904 MCM4P33991 863 aa15.93■□□□□ 0.14
CSNK1D-209ENST00000578904 KIF22Q14807 665 aa15.93■□□□□ 0.14
CSNK1D-209ENST00000578904 NOM1Q5C9Z4 860 aaKnown RBP15.93■□□□□ 0.14
CSNK1D-209ENST00000578904 ZNF296Q8WUU4 475 aaPredicted RBP15.93■□□□□ 0.14
CSNK1D-209ENST00000578904 PORCNQ9H237 461 aa15.93■□□□□ 0.14
CSNK1D-209ENST00000578904 HOMER2Q9NSB8 354 aa15.93■□□□□ 0.14
CSNK1D-209ENST00000578904 GJB4Q9NTQ9 266 aa15.93■□□□□ 0.14
CSNK1D-209ENST00000578904 CEP131Q9UPN4 1083 aa15.93■□□□□ 0.14
CSNK1D-209ENST00000578904 MRPL11Q9Y3B7 192 aaKnown RBP15.93■□□□□ 0.14
CSNK1D-209ENST00000578904 ABCB11O95342 1321 aa15.93■□□□□ 0.14
CSNK1D-209ENST00000578904 PPP1R11O60927 126 aaPredicted RBP15.92■□□□□ 0.14
CSNK1D-209ENST00000578904 BMP15O95972 392 aa15.92■□□□□ 0.14
CSNK1D-209ENST00000578904 HSPA8P11142 646 aaKnown RBP15.92■□□□□ 0.14
CSNK1D-209ENST00000578904 ERCC3P19447 782 aa15.92■□□□□ 0.14
CSNK1D-209ENST00000578904 MAPK4P31152 587 aa15.92■□□□□ 0.14
CSNK1D-209ENST00000578904 TRAPPC10P48553 1259 aa15.92■□□□□ 0.14
CSNK1D-209ENST00000578904 RGS19P49795 217 aa15.92■□□□□ 0.14
CSNK1D-209ENST00000578904 FCGRTP55899 365 aa15.92■□□□□ 0.14
CSNK1D-209ENST00000578904 LACTBP83111 547 aaPredicted RBP15.92■□□□□ 0.14
CSNK1D-209ENST00000578904 DNM1Q05193 864 aaKnown RBP15.92■□□□□ 0.14
CSNK1D-209ENST00000578904 NFKBIBQ15653 356 aa15.92■□□□□ 0.14
CSNK1D-209ENST00000578904 TKFCQ3LXA3 575 aa15.92■□□□□ 0.14
CSNK1D-209ENST00000578904 MYSM1Q5VVJ2 828 aa15.92■□□□□ 0.14
CSNK1D-209ENST00000578904 KRT25Q7Z3Z0 450 aa15.92■□□□□ 0.14
CSNK1D-209ENST00000578904 REXO1Q8N1G1 1221 aaKnown RBP15.92■□□□□ 0.14
CSNK1D-209ENST00000578904 SAMD3Q8N6K7 520 aa15.92■□□□□ 0.14
CSNK1D-209ENST00000578904 SHCBP1Q8NEM2 672 aa15.92■□□□□ 0.14
CSNK1D-209ENST00000578904 COA7Q96BR5 231 aa15.92■□□□□ 0.14
CSNK1D-209ENST00000578904 ERO1AQ96HE7 468 aa15.92■□□□□ 0.14
CSNK1D-209ENST00000578904 PSTPIP2Q9H939 334 aa15.92■□□□□ 0.14
CSNK1D-209ENST00000578904 EFCC1Q9HA90 598 aa15.92■□□□□ 0.14
CSNK1D-209ENST00000578904 RIC8AQ9NPQ8 531 aa15.92■□□□□ 0.14
CSNK1D-209ENST00000578904 RNF146Q9NTX7 359 aa15.92■□□□□ 0.14
CSNK1D-209ENST00000578904 RIPK3Q9Y572 518 aa15.92■□□□□ 0.14
CSNK1D-209ENST00000578904 CCDC85CA6NKD9 419 aa15.91■□□□□ 0.14
CSNK1D-209ENST00000578904 FOXD4L6Q3SYB3 417 aaPredicted RBP15.91■□□□□ 0.14
CSNK1D-209ENST00000578904 FOXD4L3Q6VB84 417 aaPredicted RBP15.91■□□□□ 0.14
CSNK1D-209ENST00000578904 CHST13Q8NET6 341 aa15.91■□□□□ 0.14
CSNK1D-209ENST00000578904 CD99L2Q8TCZ2 262 aa15.91■□□□□ 0.14
CSNK1D-209ENST00000578904 SPATA32Q96LK8 384 aa15.91■□□□□ 0.14
CSNK1D-209ENST00000578904 TRERF1Q96PN7 1200 aa15.91■□□□□ 0.14
CSNK1D-209ENST00000578904 MROH8Q9H579 483 aa15.91■□□□□ 0.14
CSNK1D-209ENST00000578904 ACAD9Q9H845 621 aa15.91■□□□□ 0.14
CSNK1D-209ENST00000578904 FBXO40Q9UH90 709 aa15.91■□□□□ 0.14
CSNK1D-209ENST00000578904 GOLGA6L4A6NEF3 574 aa15.9■□□□□ 0.14
CSNK1D-209ENST00000578904 TNPO2O14787 897 aaKnown RBP15.9■□□□□ 0.14
CSNK1D-209ENST00000578904 FOSP01100 380 aaPredicted RBP15.9■□□□□ 0.14
CSNK1D-209ENST00000578904 PSMC4P43686 418 aa15.9■□□□□ 0.14
CSNK1D-209ENST00000578904 SKOR2Q2VWA4 1001 aaPredicted RBP15.9■□□□□ 0.14
CSNK1D-209ENST00000578904 GPR142Q7Z601 462 aa15.9■□□□□ 0.14
CSNK1D-209ENST00000578904 MCF2L2Q86YR7 1114 aa15.9■□□□□ 0.14
CSNK1D-209ENST00000578904 ARHGAP39Q9C0H5 1083 aa15.9■□□□□ 0.14
CSNK1D-209ENST00000578904 MAF1Q9H063 256 aa15.9■□□□□ 0.14
CSNK1D-209ENST00000578904 EHMT1Q9H9B1 1298 aa15.9■□□□□ 0.14
CSNK1D-209ENST00000578904 IVNS1ABPQ9Y6Y0 642 aa15.9■□□□□ 0.14
CSNK1D-209ENST00000578904 ZSWIM8A7E2V4 1837 aa15.89■□□□□ 0.13
CSNK1D-209ENST00000578904 YEATS4O95619 227 aa15.89■□□□□ 0.13
CSNK1D-209ENST00000578904 AP3B2Q13367 1082 aa15.89■□□□□ 0.13
CSNK1D-209ENST00000578904 NONOQ15233 471 aaKnown RBP eCLIP15.89■□□□□ 0.139e-8■■■■□ 25.3
CSNK1D-209ENST00000578904 SF3A1Q15459 793 aaKnown RBP15.89■□□□□ 0.13
CSNK1D-209ENST00000578904 MUM1L1Q5H9M0 696 aa15.89■□□□□ 0.13
CSNK1D-209ENST00000578904 PLEKHH3Q7Z736 793 aa15.89■□□□□ 0.13
CSNK1D-209ENST00000578904 KCNG4Q8TDN1 519 aa15.89■□□□□ 0.13
CSNK1D-209ENST00000578904 NAP1L4Q99733 375 aaKnown RBP15.89■□□□□ 0.13
CSNK1D-209ENST00000578904 POLR3EQ9NVU0 708 aa15.89■□□□□ 0.13
CSNK1D-209ENST00000578904 MAP3K20Q9NYL2 800 aaKnown RBP15.89■□□□□ 0.13
CSNK1D-209ENST00000578904 RTEL1Q9NZ71 1219 aa15.89■□□□□ 0.13
CSNK1D-209ENST00000578904 ELP1O95163 1332 aa15.89■□□□□ 0.13
CSNK1D-209ENST00000578904 RBBP6Q7Z6E9 1792 aaKnown RBP15.88■□□□□ 0.13
CSNK1D-209ENST00000578904 KIF28PB7ZC32 967 aa15.88■□□□□ 0.13
CSNK1D-209ENST00000578904 FIBPO43427 364 aa15.88■□□□□ 0.13
CSNK1D-209ENST00000578904 CTGFP29279 349 aa15.88■□□□□ 0.13
CSNK1D-209ENST00000578904 NR5A1Q13285 461 aa15.88■□□□□ 0.13
CSNK1D-209ENST00000578904 KCTD2Q14681 263 aa15.88■□□□□ 0.13
CSNK1D-209ENST00000578904 ARHGEF6Q15052 776 aa15.88■□□□□ 0.13
CSNK1D-209ENST00000578904 STK38Q15208 465 aa15.88■□□□□ 0.13
CSNK1D-209ENST00000578904 ANO1Q5XXA6 986 aa15.88■□□□□ 0.13
CSNK1D-209ENST00000578904 TMEM87AQ8NBN3 555 aa15.88■□□□□ 0.13
CSNK1D-209ENST00000578904 TRIM47Q96LD4 638 aa15.88■□□□□ 0.13
CSNK1D-209ENST00000578904 MMP19Q99542 508 aa15.88■□□□□ 0.13
CSNK1D-209ENST00000578904 PCDHA6Q9UN73 950 aa15.88■□□□□ 0.13
CSNK1D-209ENST00000578904 CNPY2Q9Y2B0 182 aa15.88■□□□□ 0.13
CSNK1D-209ENST00000578904 PCDHA8Q9Y5H6 950 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms