RNA–Protein interactions for RNA: ENST00000578896.1

GGA3-207, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-207ENST00000578896 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.51□□□□□ -0.73
GGA3-207ENST00000578896 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.51□□□□□ -0.73
GGA3-207ENST00000578896 TLR3O15455 904 aaKnown RBP10.51□□□□□ -0.73
GGA3-207ENST00000578896 CD4P01730 458 aa10.51□□□□□ -0.73
GGA3-207ENST00000578896 FOSL2P15408 326 aa10.51□□□□□ -0.73
GGA3-207ENST00000578896 DNAJB2P25686 324 aa10.51□□□□□ -0.73
GGA3-207ENST00000578896 ZNF543Q08ER8 600 aa10.51□□□□□ -0.73
GGA3-207ENST00000578896 PPIGQ13427 754 aaKnown RBP eCLIP10.51□□□□□ -0.737e-8■□□□□ 9.8
GGA3-207ENST00000578896 USH1GQ495M9 461 aa10.51□□□□□ -0.73
GGA3-207ENST00000578896 IQSEC1Q6DN90 963 aa10.51□□□□□ -0.73
GGA3-207ENST00000578896 CHD1LQ86WJ1 897 aa10.51□□□□□ -0.73
GGA3-207ENST00000578896 SMC5Q8IY18 1101 aa10.51□□□□□ -0.73
GGA3-207ENST00000578896 TBC1D5Q92609 795 aa10.51□□□□□ -0.73
GGA3-207ENST00000578896 COPS5Q92905 334 aa10.51□□□□□ -0.73
GGA3-207ENST00000578896 WDR11Q9BZH6 1224 aa10.51□□□□□ -0.73
GGA3-207ENST00000578896 RWDD1Q9H446 243 aaPredicted RBP10.51□□□□□ -0.73
GGA3-207ENST00000578896 TCP11L1Q9NUJ3 509 aa10.51□□□□□ -0.73
GGA3-207ENST00000578896 CXXC1Q9P0U4 656 aaPredicted RBP10.51□□□□□ -0.73
GGA3-207ENST00000578896 TRIP12Q14669 1992 aaPredicted RBP10.51□□□□□ -0.73
GGA3-207ENST00000578896 MROH7Q68CQ1 1323 aa10.51□□□□□ -0.73
GGA3-207ENST00000578896 MYH6P13533 1939 aa10.5□□□□□ -0.73
GGA3-207ENST00000578896 SCN5AQ14524 2016 aa10.5□□□□□ -0.73
GGA3-207ENST00000578896 CHD9Q3L8U1 2897 aa10.5□□□□□ -0.73
GGA3-207ENST00000578896 B4GALT4O60513 344 aa10.5□□□□□ -0.73
GGA3-207ENST00000578896 MYL3P08590 195 aa10.5□□□□□ -0.73
GGA3-207ENST00000578896 NKX3-2P78367 333 aa10.5□□□□□ -0.73
GGA3-207ENST00000578896 RNF207Q6ZRF8 634 aa10.5□□□□□ -0.73
GGA3-207ENST00000578896 TMEM199Q8N511 208 aa10.5□□□□□ -0.73
GGA3-207ENST00000578896 SLC43A3Q8NBI5 491 aa10.5□□□□□ -0.73
GGA3-207ENST00000578896 TET1Q8NFU7 2136 aa10.5□□□□□ -0.73
GGA3-207ENST00000578896 SCLYQ96I15 445 aa10.5□□□□□ -0.73
GGA3-207ENST00000578896 VTA1Q9NP79 307 aa10.5□□□□□ -0.73
GGA3-207ENST00000578896 TRMT13Q9NUP7 481 aaKnown RBP10.5□□□□□ -0.73
GGA3-207ENST00000578896 GBF1Q92538 1859 aa10.5□□□□□ -0.73
GGA3-207ENST00000578896 SPTBN5Q9NRC6 3674 aaKnown RBP10.5□□□□□ -0.73
GGA3-207ENST00000578896 CHD7Q9P2D1 2997 aa10.49□□□□□ -0.73
GGA3-207ENST00000578896 B4E1Z4 1266 aa10.49□□□□□ -0.73
GGA3-207ENST00000578896 ZNF213O14771 459 aa10.49□□□□□ -0.73
GGA3-207ENST00000578896 ZEB2O60315 1214 aa10.49□□□□□ -0.73
GGA3-207ENST00000578896 KDM4AO75164 1064 aa10.49□□□□□ -0.73
GGA3-207ENST00000578896 CYP2C9P11712 490 aa10.49□□□□□ -0.73
GGA3-207ENST00000578896 CHMP4BP1P59074 171 aa10.49□□□□□ -0.73
GGA3-207ENST00000578896 RPS6P62753 249 aaKnown RBP10.49□□□□□ -0.73
GGA3-207ENST00000578896 NUCB1Q02818 461 aa10.49□□□□□ -0.73
GGA3-207ENST00000578896 DUSP28Q4G0W2 176 aa10.49□□□□□ -0.73
GGA3-207ENST00000578896 OTOP2Q7RTS6 562 aa10.49□□□□□ -0.73
GGA3-207ENST00000578896 USP38Q8NB14 1042 aa10.49□□□□□ -0.73
GGA3-207ENST00000578896 OR6J1Q8NGC5 347 aa10.49□□□□□ -0.73
GGA3-207ENST00000578896 MORC4Q8TE76 937 aa10.49□□□□□ -0.73
GGA3-207ENST00000578896 PPM1EQ8WY54 764 aa10.49□□□□□ -0.73
GGA3-207ENST00000578896 TIFAQ96CG3 184 aa10.49□□□□□ -0.73
GGA3-207ENST00000578896 PBX4Q9BYU1 374 aa10.49□□□□□ -0.73
GGA3-207ENST00000578896 WNT8AQ9H1J5 351 aa10.49□□□□□ -0.73
GGA3-207ENST00000578896 IL25Q9H293 177 aa10.49□□□□□ -0.73
GGA3-207ENST00000578896 HIPK3Q9H422 1215 aa10.49□□□□□ -0.73
GGA3-207ENST00000578896 ZNF576Q9H609 170 aa10.49□□□□□ -0.73
GGA3-207ENST00000578896 VAT1LQ9HCJ6 419 aa10.49□□□□□ -0.73
GGA3-207ENST00000578896 IL23AQ9NPF7 189 aa10.49□□□□□ -0.73
GGA3-207ENST00000578896 PRDM6Q9NQX0 595 aa10.49□□□□□ -0.73
GGA3-207ENST00000578896 DIAPH3Q9NSV4 1193 aa10.49□□□□□ -0.73
GGA3-207ENST00000578896 ADD3Q9UEY8 706 aaKnown RBP10.49□□□□□ -0.73
GGA3-207ENST00000578896 CABYRO75952 493 aa10.48□□□□□ -0.73
GGA3-207ENST00000578896 ARIH2O95376 493 aa10.48□□□□□ -0.73
GGA3-207ENST00000578896 FGBP02675 491 aa10.48□□□□□ -0.73
GGA3-207ENST00000578896 SNHG28P0DPA3 235 aa10.48□□□□□ -0.73
GGA3-207ENST00000578896 PDE4DQ08499 809 aa10.48□□□□□ -0.73
GGA3-207ENST00000578896 RASIP1Q5U651 963 aa10.48□□□□□ -0.73
GGA3-207ENST00000578896 PNMA1Q8ND90 353 aa10.48□□□□□ -0.73
GGA3-207ENST00000578896 ESR2Q92731 530 aa10.48□□□□□ -0.73
GGA3-207ENST00000578896 VWCEQ96DN2 955 aa10.48□□□□□ -0.73
GGA3-207ENST00000578896 TTC14Q96N46 770 aa10.48□□□□□ -0.73
GGA3-207ENST00000578896 NOC4LQ9BVI4 516 aaKnown RBP10.48□□□□□ -0.73
GGA3-207ENST00000578896 RNF41Q9H4P4 317 aaPredicted RBP10.48□□□□□ -0.73
GGA3-207ENST00000578896 PRDM12Q9H4Q4 367 aa10.48□□□□□ -0.73
GGA3-207ENST00000578896 ZMYM6O95789 1325 aa10.48□□□□□ -0.73
GGA3-207ENST00000578896 PRRC2BQ5JSZ5 2229 aaKnown RBP10.48□□□□□ -0.73
GGA3-207ENST00000578896 MYH7BA7E2Y1 1941 aa10.47□□□□□ -0.73
GGA3-207ENST00000578896 SCN10AQ9Y5Y9 1956 aa10.47□□□□□ -0.73
GGA3-207ENST00000578896 RBM47A0AV96 593 aaKnown RBP10.47□□□□□ -0.73
GGA3-207ENST00000578896 MYOGP15173 224 aa10.47□□□□□ -0.73
GGA3-207ENST00000578896 RABGGTBP53611 331 aa10.47□□□□□ -0.73
GGA3-207ENST00000578896 CDC37Q16543 378 aaPredicted RBP10.47□□□□□ -0.73
GGA3-207ENST00000578896 NBPF20Q3BBV1 942 aa10.47□□□□□ -0.73
GGA3-207ENST00000578896 FAM47CQ5HY64 1035 aa10.47□□□□□ -0.73
GGA3-207ENST00000578896 DEFB128Q7Z7B8 93 aa10.47□□□□□ -0.73
GGA3-207ENST00000578896 ADGRF4Q8IZF3 695 aa10.47□□□□□ -0.73
GGA3-207ENST00000578896 TAAR1Q96RJ0 339 aa10.47□□□□□ -0.73
GGA3-207ENST00000578896 ALDH8A1Q9H2A2 487 aaPredicted RBP10.47□□□□□ -0.73
GGA3-207ENST00000578896 NKX2-4Q9H2Z4 354 aa10.47□□□□□ -0.73
GGA3-207ENST00000578896 OSBPL3Q9H4L5 887 aa10.47□□□□□ -0.73
GGA3-207ENST00000578896 KAT14Q9H8E8 782 aa10.47□□□□□ -0.73
GGA3-207ENST00000578896 ZSWIM5Q9P217 1185 aa10.47□□□□□ -0.73
GGA3-207ENST00000578896 COL20A1Q9P218 1284 aa10.47□□□□□ -0.73
GGA3-207ENST00000578896 YBX2Q9Y2T7 364 aaKnown RBP10.47□□□□□ -0.73
GGA3-207ENST00000578896 Q9Y3F1 56 aa10.47□□□□□ -0.73
GGA3-207ENST00000578896 ZBBXA8MT70 800 aa10.46□□□□□ -0.73
GGA3-207ENST00000578896 DHX16O60231 1041 aaKnown RBP10.46□□□□□ -0.73
GGA3-207ENST00000578896 TXNP10599 105 aaKnown RBP10.46□□□□□ -0.73
GGA3-207ENST00000578896 EDNRBP24530 442 aa10.46□□□□□ -0.73
GGA3-207ENST00000578896 PDE4AP27815 886 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms