RNA–Protein interactions for RNA: ENST00000578600.1

PTPRM-208, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 2

Gene PTPRM, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-208ENST00000578600 GATA4P43694 442 aa7.44□□□□□ -1.22
PTPRM-208ENST00000578600 RNF4P78317 190 aa7.44□□□□□ -1.22
PTPRM-208ENST00000578600 SV2CQ496J9 727 aa7.44□□□□□ -1.22
PTPRM-208ENST00000578600 DCAF15Q66K64 600 aa7.44□□□□□ -1.22
PTPRM-208ENST00000578600 KRT28Q7Z3Y7 464 aa7.44□□□□□ -1.22
PTPRM-208ENST00000578600 CCDC144CPQ8IYA2 1237 aa7.44□□□□□ -1.22
PTPRM-208ENST00000578600 SYNPOQ8N3V7 929 aa7.44□□□□□ -1.22
PTPRM-208ENST00000578600 ASPNQ9BXN1 380 aa7.44□□□□□ -1.22
PTPRM-208ENST00000578600 BRINP2Q9C0B6 783 aa7.44□□□□□ -1.22
PTPRM-208ENST00000578600 C7orf69Q9H7B7 122 aa7.44□□□□□ -1.22
PTPRM-208ENST00000578600 RAXQ9Y2V3 346 aa7.44□□□□□ -1.22
PTPRM-208ENST00000578600 ZNF451Q9Y4E5 1061 aa7.44□□□□□ -1.22
PTPRM-208ENST00000578600 COL4A3BPQ9Y5P4 624 aa7.44□□□□□ -1.22
PTPRM-208ENST00000578600 SPHKAPQ2M3C7 1700 aa7.44□□□□□ -1.22
PTPRM-208ENST00000578600 COL22A1Q8NFW1 1626 aaPredicted RBP7.43□□□□□ -1.22
PTPRM-208ENST00000578600 HMX2A2RU54 273 aa7.43□□□□□ -1.22
PTPRM-208ENST00000578600 ANKRD34BA5PLL1 514 aa7.43□□□□□ -1.22
PTPRM-208ENST00000578600 ASMTLO95671 621 aa7.43□□□□□ -1.22
PTPRM-208ENST00000578600 FAM87AP0C7U9 286 aa7.43□□□□□ -1.22
PTPRM-208ENST00000578600 RASSF7Q02833 373 aa7.43□□□□□ -1.22
PTPRM-208ENST00000578600 AUHQ13825 339 aaKnown RBP7.43□□□□□ -1.22
PTPRM-208ENST00000578600 NBPF9Q3BBW0 867 aa7.43□□□□□ -1.22
PTPRM-208ENST00000578600 TMEM67Q5HYA8 995 aa7.43□□□□□ -1.22
PTPRM-208ENST00000578600 ZC3H12BQ5HYM0 836 aaKnown RBP7.43□□□□□ -1.22
PTPRM-208ENST00000578600 OGFOD3Q6PK18 319 aa7.43□□□□□ -1.22
PTPRM-208ENST00000578600 ZAR1Q86SH2 424 aa7.43□□□□□ -1.22
PTPRM-208ENST00000578600 C7orf61Q8IZ16 206 aa7.43□□□□□ -1.22
PTPRM-208ENST00000578600 SHISA5Q8N114 240 aa7.43□□□□□ -1.22
PTPRM-208ENST00000578600 GIMAP7Q8NHV1 300 aa7.43□□□□□ -1.22
PTPRM-208ENST00000578600 SGSM3Q96HU1 749 aa7.43□□□□□ -1.22
PTPRM-208ENST00000578600 APBA2Q99767 749 aa7.43□□□□□ -1.22
PTPRM-208ENST00000578600 LRP2BPQ9P2M1 347 aa7.43□□□□□ -1.22
PTPRM-208ENST00000578600 NOP58Q9Y2X3 529 aaKnown RBP7.43□□□□□ -1.22
PTPRM-208ENST00000578600 EP400Q96L91 3159 aa7.43□□□□□ -1.22
PTPRM-208ENST00000578600 SBNO1A3KN83 1393 aa7.43□□□□□ -1.22
PTPRM-208ENST00000578600 XRN1Q8IZH2 1706 aaKnown RBP7.42□□□□□ -1.22
PTPRM-208ENST00000578600 ADCY3O60266 1144 aa7.42□□□□□ -1.22
PTPRM-208ENST00000578600 FAM153BP0C7A2 387 aa7.42□□□□□ -1.22
PTPRM-208ENST00000578600 LONRF2Q1L5Z9 754 aa7.42□□□□□ -1.22
PTPRM-208ENST00000578600 HEATR6Q6AI08 1181 aaKnown RBP7.42□□□□□ -1.22
PTPRM-208ENST00000578600 PRR23CQ6ZRP0 262 aa7.42□□□□□ -1.22
PTPRM-208ENST00000578600 ZBTB38Q8NAP3 1195 aaPredicted RBP7.42□□□□□ -1.22
PTPRM-208ENST00000578600 PPP1R14AQ96A00 147 aa7.42□□□□□ -1.22
PTPRM-208ENST00000578600 TP53INP1Q96A56 240 aa7.42□□□□□ -1.22
PTPRM-208ENST00000578600 HEXIM2Q96MH2 286 aaKnown RBP7.42□□□□□ -1.22
PTPRM-208ENST00000578600 IPO9Q96P70 1041 aaKnown RBP7.42□□□□□ -1.22
PTPRM-208ENST00000578600 MKRN2Q9H000 416 aaKnown RBP7.42□□□□□ -1.22
PTPRM-208ENST00000578600 STOML1Q9UBI4 398 aa7.42□□□□□ -1.22
PTPRM-208ENST00000578600 KCNQ2O43526 872 aa7.41□□□□□ -1.22
PTPRM-208ENST00000578600 LRRN2O75325 713 aa7.41□□□□□ -1.22
PTPRM-208ENST00000578600 CAPNS1P04632 268 aa7.41□□□□□ -1.22
PTPRM-208ENST00000578600 CD247P20963 164 aa7.41□□□□□ -1.22
PTPRM-208ENST00000578600 CYP7A1P22680 504 aa7.41□□□□□ -1.22
PTPRM-208ENST00000578600 TKFCQ3LXA3 575 aa7.41□□□□□ -1.22
PTPRM-208ENST00000578600 COX4I2Q96KJ9 171 aa7.41□□□□□ -1.22
PTPRM-208ENST00000578600 Q96M66 194 aa7.41□□□□□ -1.22
PTPRM-208ENST00000578600 CDC6Q99741 560 aa7.41□□□□□ -1.22
PTPRM-208ENST00000578600 GP6Q9HCN6 339 aa7.41□□□□□ -1.22
PTPRM-208ENST00000578600 PCDH12Q9NPG4 1184 aa7.41□□□□□ -1.22
PTPRM-208ENST00000578600 APEX2Q9UBZ4 518 aa7.41□□□□□ -1.22
PTPRM-208ENST00000578600 CROCC2H7BZ55 1655 aa7.41□□□□□ -1.22
PTPRM-208ENST00000578600 IGF2BP3O00425 579 aaKnown RBP eCLIP7.4□□□□□ -1.22
PTPRM-208ENST00000578600 C22orf34Q6ZV56 151 aa7.4□□□□□ -1.22
PTPRM-208ENST00000578600 FGD4Q96M96 766 aa7.4□□□□□ -1.22
PTPRM-208ENST00000578600 TBC1D32Q96NH3 1257 aa7.4□□□□□ -1.22
PTPRM-208ENST00000578600 CAMKK2Q96RR4 588 aa7.4□□□□□ -1.22
PTPRM-208ENST00000578600 GBP3Q9H0R5 595 aa7.4□□□□□ -1.22
PTPRM-208ENST00000578600 TPSG1Q9NRR2 321 aa7.4□□□□□ -1.22
PTPRM-208ENST00000578600 TPX2Q9ULW0 747 aaKnown RBP7.4□□□□□ -1.22
PTPRM-208ENST00000578600 PLAAQ9Y263 795 aa7.4□□□□□ -1.22
PTPRM-208ENST00000578600 CD2APQ9Y5K6 639 aa7.4□□□□□ -1.22
PTPRM-208ENST00000578600 EIF3AQ14152 1382 aaKnown RBP7.4□□□□□ -1.22
PTPRM-208ENST00000578600 PXDNQ92626 1479 aa7.4□□□□□ -1.22
PTPRM-208ENST00000578600 IQGAP3Q86VI3 1631 aa7.4□□□□□ -1.22
PTPRM-208ENST00000578600 GCC2Q8IWJ2 1684 aa7.4□□□□□ -1.23
PTPRM-208ENST00000578600 GPRASP1Q5JY77 1395 aa7.39□□□□□ -1.23
PTPRM-208ENST00000578600 ABCC11Q96J66 1382 aa7.39□□□□□ -1.23
PTPRM-208ENST00000578600 A0A087WZG4 1122 aa7.39□□□□□ -1.23
PTPRM-208ENST00000578600 CCDC163A0A0D9SF12 145 aa7.39□□□□□ -1.23
PTPRM-208ENST00000578600 A0A1W2PQU0 124 aa7.39□□□□□ -1.23
PTPRM-208ENST00000578600 FAM83GA6ND36 823 aa7.39□□□□□ -1.23
PTPRM-208ENST00000578600 PLA2G4EQ3MJ16 856 aa7.39□□□□□ -1.23
PTPRM-208ENST00000578600 SFRP5Q5T4F7 317 aa7.39□□□□□ -1.23
PTPRM-208ENST00000578600 RNF43Q68DV7 783 aa7.39□□□□□ -1.23
PTPRM-208ENST00000578600 ADAT2Q7Z6V5 191 aaKnown RBP7.39□□□□□ -1.23
PTPRM-208ENST00000578600 PRDM14Q9GZV8 571 aa7.39□□□□□ -1.23
PTPRM-208ENST00000578600 PRDM5Q9NQX1 630 aaPredicted RBP7.39□□□□□ -1.23
PTPRM-208ENST00000578600 BTG4Q9NY30 223 aa7.39□□□□□ -1.23
PTPRM-208ENST00000578600 PRR13Q9NZ81 148 aa7.39□□□□□ -1.23
PTPRM-208ENST00000578600 WHRNQ9P202 907 aa7.39□□□□□ -1.23
PTPRM-208ENST00000578600 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.38□□□□□ -1.23
PTPRM-208ENST00000578600 TNS3Q68CZ2 1445 aa7.38□□□□□ -1.23
PTPRM-208ENST00000578600 ANKRD30BQ9BXX2 1392 aa7.38□□□□□ -1.23
PTPRM-208ENST00000578600 SPATA31A5Q5VU36 1347 aa7.38□□□□□ -1.23
PTPRM-208ENST00000578600 SPATA31A7Q8IWB4 1347 aa7.38□□□□□ -1.23
PTPRM-208ENST00000578600 TRAV20A0A0B4J274 112 aa7.38□□□□□ -1.23
PTPRM-208ENST00000578600 FAM170BA6NMN3 283 aa7.38□□□□□ -1.23
PTPRM-208ENST00000578600 ITGAVP06756 1048 aa7.38□□□□□ -1.23
PTPRM-208ENST00000578600 ZNF865P0CJ78 1059 aaPredicted RBP7.38□□□□□ -1.23
PTPRM-208ENST00000578600 KIR3DL1P43629 444 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms