RNA–Protein interactions for RNA: ENST00000578208.1

GGA3-204, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 3

Gene GGA3, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-204ENST00000578208 TNFAIP2Q03169 654 aa13.47□□□□□ -0.25
GGA3-204ENST00000578208 EEPD1Q7L9B9 569 aa13.47□□□□□ -0.25
GGA3-204ENST00000578208 SGMS1Q86VZ5 419 aa13.47□□□□□ -0.25
GGA3-204ENST00000578208 MICU3Q86XE3 530 aa13.47□□□□□ -0.25
GGA3-204ENST00000578208 FBXO16Q8IX29 292 aaPredicted RBP13.47□□□□□ -0.25
GGA3-204ENST00000578208 RASEFQ8IZ41 740 aa13.47□□□□□ -0.25
GGA3-204ENST00000578208 LENG1Q96BZ8 264 aaPredicted RBP13.47□□□□□ -0.25
GGA3-204ENST00000578208 MTMR8Q96EF0 704 aa13.47□□□□□ -0.25
GGA3-204ENST00000578208 JAKMIP1Q96N16 626 aaKnown RBP13.47□□□□□ -0.25
GGA3-204ENST00000578208 PURBQ96QR8 312 aaKnown RBP13.47□□□□□ -0.25
GGA3-204ENST00000578208 SPZ1Q9BXG8 430 aa13.47□□□□□ -0.25
GGA3-204ENST00000578208 LRRC37A2A6NM11 1700 aa13.47□□□□□ -0.25
GGA3-204ENST00000578208 ASTN1O14525 1302 aa13.46□□□□□ -0.25
GGA3-204ENST00000578208 PNMA6FA0A0J9YX94 578 aa13.46□□□□□ -0.25
GGA3-204ENST00000578208 EIF5BO60841 1220 aaKnown RBP13.46□□□□□ -0.25
GGA3-204ENST00000578208 C6orf222P0C671 652 aaPredicted RBP13.46□□□□□ -0.25
GGA3-204ENST00000578208 RXRAP19793 462 aa13.46□□□□□ -0.25
GGA3-204ENST00000578208 ATN1P54259 1190 aaPredicted RBP13.46□□□□□ -0.25
GGA3-204ENST00000578208 ADCK5Q3MIX3 580 aa13.46□□□□□ -0.25
GGA3-204ENST00000578208 BLOC1S2Q6QNY1 142 aa13.46□□□□□ -0.25
GGA3-204ENST00000578208 PCSK9Q8NBP7 692 aaKnown RBP13.46□□□□□ -0.25
GGA3-204ENST00000578208 MORC4Q8TE76 937 aa13.46□□□□□ -0.25
GGA3-204ENST00000578208 PIBF1Q8WXW3 757 aa13.46□□□□□ -0.25
GGA3-204ENST00000578208 TSEN34Q9BSV6 310 aaKnown RBP13.46□□□□□ -0.25
GGA3-204ENST00000578208 KATNBL1Q9H079 304 aa13.46□□□□□ -0.25
GGA3-204ENST00000578208 NAP1L2Q9ULW6 460 aaPredicted RBP13.46□□□□□ -0.25
GGA3-204ENST00000578208 SNX14Q9Y5W7 946 aa13.46□□□□□ -0.25
GGA3-204ENST00000578208 MYH6P13533 1939 aa13.45□□□□□ -0.26
GGA3-204ENST00000578208 ADAMTS4O75173 837 aa13.45□□□□□ -0.26
GGA3-204ENST00000578208 SMARCA1P28370 1054 aa13.45□□□□□ -0.26
GGA3-204ENST00000578208 ADCYAP1R1P41586 468 aa13.45□□□□□ -0.26
GGA3-204ENST00000578208 EXOSC10Q01780 885 aaKnown RBP13.45□□□□□ -0.26
GGA3-204ENST00000578208 LRRC26Q2I0M4 334 aa13.45□□□□□ -0.26
GGA3-204ENST00000578208 ARHGEF16Q5VV41 709 aa13.45□□□□□ -0.26
GGA3-204ENST00000578208 IQSEC1Q6DN90 963 aa13.45□□□□□ -0.26
GGA3-204ENST00000578208 RAB11FIP4Q86YS3 637 aa13.45□□□□□ -0.26
GGA3-204ENST00000578208 SAMD3Q8N6K7 520 aa13.45□□□□□ -0.26
GGA3-204ENST00000578208 SYTL5Q8TDW5 730 aaPredicted RBP13.45□□□□□ -0.26
GGA3-204ENST00000578208 NSUN6Q8TEA1 469 aaKnown RBP13.45□□□□□ -0.26
GGA3-204ENST00000578208 KCNB2Q92953 911 aa13.45□□□□□ -0.26
GGA3-204ENST00000578208 FERMT2Q96AC1 680 aa13.45□□□□□ -0.26
GGA3-204ENST00000578208 TCEANC2Q96MN5 208 aa13.45□□□□□ -0.26
GGA3-204ENST00000578208 AP5M1Q9H0R1 490 aa13.45□□□□□ -0.26
GGA3-204ENST00000578208 RBM28Q9NW13 759 aaKnown RBP13.45□□□□□ -0.26
GGA3-204ENST00000578208 MAP3K20Q9NYL2 800 aaKnown RBP13.45□□□□□ -0.26
GGA3-204ENST00000578208 PHF24Q9UPV7 400 aa13.45□□□□□ -0.26
GGA3-204ENST00000578208 LCTP09848 1927 aa13.45□□□□□ -0.26
GGA3-204ENST00000578208 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.44□□□□□ -0.26
GGA3-204ENST00000578208 MOXD2PA6NHM9 499 aa13.44□□□□□ -0.26
GGA3-204ENST00000578208 GOLGA8AA7E2F4 631 aa13.44□□□□□ -0.26
GGA3-204ENST00000578208 GOLGA8BA8MQT2 603 aa13.44□□□□□ -0.26
GGA3-204ENST00000578208 GCOM1H8Y6P7 765 aaPredicted RBP13.44□□□□□ -0.26
GGA3-204ENST00000578208 ZBTB43O43298 467 aa13.44□□□□□ -0.26
GGA3-204ENST00000578208 CYTH3O43739 400 aa13.44□□□□□ -0.26
GGA3-204ENST00000578208 ZEB2O60315 1214 aa13.44□□□□□ -0.26
GGA3-204ENST00000578208 PPP1R11O60927 126 aaPredicted RBP13.44□□□□□ -0.26
GGA3-204ENST00000578208 PLEKHA8P1O95397 391 aa13.44□□□□□ -0.26
GGA3-204ENST00000578208 POLR2MP0CAP2 368 aa13.44□□□□□ -0.26
GGA3-204ENST00000578208 GJA9P57773 515 aa13.44□□□□□ -0.26
GGA3-204ENST00000578208 COL9A3Q14050 684 aaPredicted RBP13.44□□□□□ -0.26
GGA3-204ENST00000578208 APOA5Q6Q788 366 aa13.44□□□□□ -0.26
GGA3-204ENST00000578208 TLK2Q86UE8 772 aa13.44□□□□□ -0.26
GGA3-204ENST00000578208 FANCBQ8NB91 859 aa13.44□□□□□ -0.26
GGA3-204ENST00000578208 CUL5Q93034 780 aa13.44□□□□□ -0.26
GGA3-204ENST00000578208 RMDN3Q96TC7 470 aa13.44□□□□□ -0.26
GGA3-204ENST00000578208 UPF3AQ9H1J1 476 aaKnown RBP13.44□□□□□ -0.26
GGA3-204ENST00000578208 PRKAG2Q9UGJ0 569 aa13.44□□□□□ -0.26
GGA3-204ENST00000578208 ZMYND8Q9ULU4 1186 aaPredicted RBP13.44□□□□□ -0.26
GGA3-204ENST00000578208 ATP11BQ9Y2G3 1177 aa13.44□□□□□ -0.26
GGA3-204ENST00000578208 DDX49Q9Y6V7 483 aaKnown RBP13.44□□□□□ -0.26
GGA3-204ENST00000578208 MCM3APO60318 1980 aa13.43□□□□□ -0.26
GGA3-204ENST00000578208 KLF18A0A0U1RQI7 1052 aa13.43□□□□□ -0.26
GGA3-204ENST00000578208 A0A1W2PQ45 241 aaPredicted RBP13.43□□□□□ -0.26
GGA3-204ENST00000578208 A0A1W2PQY0 241 aa13.43□□□□□ -0.26
GGA3-204ENST00000578208 CASTP20810 708 aaKnown RBP13.43□□□□□ -0.26
GGA3-204ENST00000578208 EDNRBP24530 442 aa13.43□□□□□ -0.26
GGA3-204ENST00000578208 CST5P28325 142 aaPredicted RBP13.43□□□□□ -0.26
GGA3-204ENST00000578208 HSD17B4P51659 736 aa13.43□□□□□ -0.26
GGA3-204ENST00000578208 RTP1P59025 263 aa13.43□□□□□ -0.26
GGA3-204ENST00000578208 PPP2R5BQ15173 497 aa13.43□□□□□ -0.26
GGA3-204ENST00000578208 STXBP2Q15833 593 aa13.43□□□□□ -0.26
GGA3-204ENST00000578208 RTN1Q16799 776 aa13.43□□□□□ -0.26
GGA3-204ENST00000578208 SLC35G1Q2M3R5 365 aa13.43□□□□□ -0.26
GGA3-204ENST00000578208 GNASQ5JWF2 1037 aa13.43□□□□□ -0.26
GGA3-204ENST00000578208 TAPT1Q6NXT6 567 aa13.43□□□□□ -0.26
GGA3-204ENST00000578208 SLC39A5Q6ZMH5 540 aa13.43□□□□□ -0.26
GGA3-204ENST00000578208 Q6ZUG5 572 aa13.43□□□□□ -0.26
GGA3-204ENST00000578208 TMTC3Q6ZXV5 915 aa13.43□□□□□ -0.26
GGA3-204ENST00000578208 KLHDC9Q8NEP7 349 aa13.43□□□□□ -0.26
GGA3-204ENST00000578208 SCFD2Q8WU76 684 aa13.43□□□□□ -0.26
GGA3-204ENST00000578208 TBC1D5Q92609 795 aa13.43□□□□□ -0.26
GGA3-204ENST00000578208 VTI1AQ96AJ9 217 aa13.43□□□□□ -0.26
GGA3-204ENST00000578208 GLT1D1Q96MS3 346 aa13.43□□□□□ -0.26
GGA3-204ENST00000578208 TAAR1Q96RJ0 339 aa13.43□□□□□ -0.26
GGA3-204ENST00000578208 IWS1Q96ST2 819 aa13.43□□□□□ -0.26
GGA3-204ENST00000578208 WDR11Q9BZH6 1224 aa13.43□□□□□ -0.26
GGA3-204ENST00000578208 STARD7Q9NQZ5 370 aa13.43□□□□□ -0.26
GGA3-204ENST00000578208 PDGFCQ9NRA1 345 aa13.43□□□□□ -0.26
GGA3-204ENST00000578208 SMCHD1A6NHR9 2005 aa13.42□□□□□ -0.26
GGA3-204ENST00000578208 NKRFO15226 690 aaKnown RBP eCLIP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 126 ms