RNA–Protein interactions for RNA: ENST00000578067.5

LIMD2-203, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 2,019 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-203ENST00000578067 KBTBD4Q9NVX7 518 aa31.23■■■□□ 2.59
LIMD2-203ENST00000578067 RPN1P04843 607 aaKnown RBP31.22■■■□□ 2.59
LIMD2-203ENST00000578067 CD44P16070 742 aaKnown RBP31.22■■■□□ 2.59
LIMD2-203ENST00000578067 TNFAIP1Q13829 316 aa31.22■■■□□ 2.59
LIMD2-203ENST00000578067 DPF2Q92785 391 aa31.22■■■□□ 2.59
LIMD2-203ENST00000578067 SH2D4AQ9H788 454 aa31.22■■■□□ 2.59
LIMD2-203ENST00000578067 DDX25Q9UHL0 483 aaKnown RBP31.22■■■□□ 2.59
LIMD2-203ENST00000578067 PPP1R3GB7ZBB8 358 aa31.22■■■□□ 2.59
LIMD2-203ENST00000578067 OFD1O75665 1012 aa31.22■■■□□ 2.59
LIMD2-203ENST00000578067 PLCG1P19174 1290 aa31.22■■■□□ 2.59
LIMD2-203ENST00000578067 UBASH3AP57075 661 aa31.22■■■□□ 2.59
LIMD2-203ENST00000578067 AP3B2Q13367 1082 aa31.22■■■□□ 2.59
LIMD2-203ENST00000578067 FILIP1Q7Z7B0 1213 aa31.22■■■□□ 2.59
LIMD2-203ENST00000578067 CACTINQ8WUQ7 758 aaKnown RBP31.22■■■□□ 2.59
LIMD2-203ENST00000578067 FZD9O00144 591 aa31.21■■■□□ 2.59
LIMD2-203ENST00000578067 MEIS2O14770 477 aa31.21■■■□□ 2.59
LIMD2-203ENST00000578067 GMPSP49915 693 aaPredicted RBP31.21■■■□□ 2.59
LIMD2-203ENST00000578067 LRMPQ12912 555 aa31.21■■■□□ 2.59
LIMD2-203ENST00000578067 PDIA5Q14554 519 aa31.21■■■□□ 2.59
LIMD2-203ENST00000578067 MMTAG2Q9BU76 263 aaKnown RBP31.21■■■□□ 2.59
LIMD2-203ENST00000578067 ANO3Q9BYT9 981 aa31.21■■■□□ 2.59
LIMD2-203ENST00000578067 RAB34Q9BZG1 259 aa31.21■■■□□ 2.59
LIMD2-203ENST00000578067 LRWD1Q9UFC0 647 aa31.21■■■□□ 2.59
LIMD2-203ENST00000578067 EGFRP00533 1210 aa31.2■■■□□ 2.59
LIMD2-203ENST00000578067 ZNF18P17022 549 aa31.2■■■□□ 2.59
LIMD2-203ENST00000578067 NOLC1Q14978 699 aaKnown RBP eCLIP31.2■■■□□ 2.59
LIMD2-203ENST00000578067 USH1GQ495M9 461 aa31.2■■■□□ 2.59
LIMD2-203ENST00000578067 FAM83BQ5T0W9 1011 aa31.2■■■□□ 2.59
LIMD2-203ENST00000578067 VCPKMTQ9H867 229 aa31.2■■■□□ 2.59
LIMD2-203ENST00000578067 ASNSP08243 561 aa31.2■■■□□ 2.58
LIMD2-203ENST00000578067 USP11P51784 963 aa31.2■■■□□ 2.58
LIMD2-203ENST00000578067 LRRC8AQ8IWT6 810 aa31.2■■■□□ 2.58
LIMD2-203ENST00000578067 MICALL2Q8IY33 904 aa31.2■■■□□ 2.58
LIMD2-203ENST00000578067 SMYD4Q8IYR2 804 aaPredicted RBP31.2■■■□□ 2.58
LIMD2-203ENST00000578067 CALML4Q96GE6 196 aa31.2■■■□□ 2.58
LIMD2-203ENST00000578067 GSDMDP57764 484 aa31.19■■■□□ 2.58
LIMD2-203ENST00000578067 ZNF658Q5TYW1 1059 aaPredicted RBP31.19■■■□□ 2.58
LIMD2-203ENST00000578067 KLHL10Q6JEL2 608 aa31.19■■■□□ 2.58
LIMD2-203ENST00000578067 FRMD4AQ9P2Q2 1039 aaPredicted RBP31.19■■■□□ 2.58
LIMD2-203ENST00000578067 PSDA5PKW4 1024 aaPredicted RBP31.19■■■□□ 2.58
LIMD2-203ENST00000578067 PRELPP51888 382 aa31.19■■■□□ 2.58
LIMD2-203ENST00000578067 SPATA1Q5VX52 437 aa31.19■■■□□ 2.58
LIMD2-203ENST00000578067 LRRC15Q8TF66 581 aa31.19■■■□□ 2.58
LIMD2-203ENST00000578067 TEPSINQ96N21 525 aa31.19■■■□□ 2.58
LIMD2-203ENST00000578067 GJA3Q9Y6H8 435 aa31.19■■■□□ 2.58
LIMD2-203ENST00000578067 TRAF1Q13077 416 aa31.18■■■□□ 2.58
LIMD2-203ENST00000578067 PDZRN4Q6ZMN7 1036 aaPredicted RBP31.18■■■□□ 2.58
LIMD2-203ENST00000578067 TMC6Q7Z403 805 aa31.18■■■□□ 2.58
LIMD2-203ENST00000578067 CHURC1Q8WUH1 139 aa31.18■■■□□ 2.58
LIMD2-203ENST00000578067 CNOT7Q9UIV1 285 aaKnown RBP31.18■■■□□ 2.58
LIMD2-203ENST00000578067 SCAF8Q9UPN6 1271 aaKnown RBP31.18■■■□□ 2.58
LIMD2-203ENST00000578067 SYNRGQ9UMZ2 1314 aa31.18■■■□□ 2.58
LIMD2-203ENST00000578067 CDK11BP21127 795 aaKnown RBP31.17■■■□□ 2.58
LIMD2-203ENST00000578067 SPTLC3Q9NUV7 552 aa31.17■■■□□ 2.58
LIMD2-203ENST00000578067 SEMA3FQ13275 785 aa31.17■■■□□ 2.58
LIMD2-203ENST00000578067 KCNB1Q14721 858 aa31.17■■■□□ 2.58
LIMD2-203ENST00000578067 C17orf53Q8N3J3 647 aaPredicted RBP31.17■■■□□ 2.58
LIMD2-203ENST00000578067 PHF20L1A8MW92 1017 aa31.16■■■□□ 2.58
LIMD2-203ENST00000578067 FOSP01100 380 aaPredicted RBP31.16■■■□□ 2.58
LIMD2-203ENST00000578067 ARID5BQ14865 1188 aa31.16■■■□□ 2.58
LIMD2-203ENST00000578067 SAMD7Q7Z3H4 446 aa31.16■■■□□ 2.58
LIMD2-203ENST00000578067 HAS1Q92839 578 aa31.16■■■□□ 2.58
LIMD2-203ENST00000578067 SAMSN1Q9NSI8 373 aaKnown RBP31.16■■■□□ 2.58
LIMD2-203ENST00000578067 MYH7BA7E2Y1 1941 aa31.16■■■□□ 2.58
LIMD2-203ENST00000578067 CYP3A7-CYP3A51PA0A087WV96 503 aa31.15■■■□□ 2.58
LIMD2-203ENST00000578067 PLA2G6O60733 806 aa31.15■■■□□ 2.58
LIMD2-203ENST00000578067 CYP3A7P24462 503 aa31.15■■■□□ 2.58
LIMD2-203ENST00000578067 NLGN2Q8NFZ4 835 aa31.15■■■□□ 2.58
LIMD2-203ENST00000578067 NAP1L5Q96NT1 182 aaPredicted RBP31.15■■■□□ 2.58
LIMD2-203ENST00000578067 MARCH6O60337 910 aa31.15■■■□□ 2.58
LIMD2-203ENST00000578067 STX17P56962 302 aa31.15■■■□□ 2.58
LIMD2-203ENST00000578067 ZYXQ15942 572 aaKnown RBP31.15■■■□□ 2.58
LIMD2-203ENST00000578067 HSP90AA4PQ58FG1 418 aa31.15■■■□□ 2.58
LIMD2-203ENST00000578067 MOXD1Q6UVY6 613 aa31.15■■■□□ 2.58
LIMD2-203ENST00000578067 TBC1D10BQ4KMP7 808 aaPredicted RBP31.14■■■□□ 2.58
LIMD2-203ENST00000578067 FAM160B2Q86V87 743 aa31.14■■■□□ 2.58
LIMD2-203ENST00000578067 CRYGNQ8WXF5 182 aa31.14■■■□□ 2.58
LIMD2-203ENST00000578067 MBOAT7Q96N66 472 aa31.14■■■□□ 2.58
LIMD2-203ENST00000578067 POTEMA6NI47 508 aa31.14■■■□□ 2.57
LIMD2-203ENST00000578067 KLRC4O43908 158 aa31.14■■■□□ 2.57
LIMD2-203ENST00000578067 GRB10Q13322 594 aa31.14■■■□□ 2.57
LIMD2-203ENST00000578067 DHX8Q14562 1220 aaKnown RBP31.14■■■□□ 2.57
LIMD2-203ENST00000578067 P2RX7Q99572 595 aaKnown RBP31.14■■■□□ 2.57
LIMD2-203ENST00000578067 GLIS2Q9BZE0 524 aaPredicted RBP31.14■■■□□ 2.57
LIMD2-203ENST00000578067 CTNND2Q9UQB3 1225 aa31.14■■■□□ 2.57
LIMD2-203ENST00000578067 SPDYE3A6NKU9 549 aa31.13■■■□□ 2.57
LIMD2-203ENST00000578067 OPLAHO14841 1288 aa31.13■■■□□ 2.57
LIMD2-203ENST00000578067 AMPD3Q01432 767 aa31.13■■■□□ 2.57
LIMD2-203ENST00000578067 KMT5BQ4FZB7 885 aa31.13■■■□□ 2.57
LIMD2-203ENST00000578067 TEX2Q8IWB9 1127 aa31.13■■■□□ 2.57
LIMD2-203ENST00000578067 C7orf25Q9BPX7 421 aa31.13■■■□□ 2.57
LIMD2-203ENST00000578067 RANBP17Q9H2T7 1088 aaKnown RBP31.13■■■□□ 2.57
LIMD2-203ENST00000578067 STK17AQ9UEE5 414 aa31.13■■■□□ 2.57
LIMD2-203ENST00000578067 RWDD2AQ9UIY3 292 aa31.13■■■□□ 2.57
LIMD2-203ENST00000578067 HACL1Q9UJ83 578 aa31.13■■■□□ 2.57
LIMD2-203ENST00000578067 ARHGAP4P98171 946 aa31.12■■■□□ 2.57
LIMD2-203ENST00000578067 KRT79Q5XKE5 535 aa31.12■■■□□ 2.57
LIMD2-203ENST00000578067 KIFC2Q96AC6 838 aa31.12■■■□□ 2.57
LIMD2-203ENST00000578067 CDK5RAP3Q96JB5 506 aa31.12■■■□□ 2.57
LIMD2-203ENST00000578067 PNMA5Q96PV4 448 aa31.12■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms