RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 GRXCR1A8MXD5 290 aa18.79■□□□□ 0.6
VAPA-204ENST00000577901 CABYRO75952 493 aa18.79■□□□□ 0.6
VAPA-204ENST00000577901 CYP2C18P33260 490 aa18.79■□□□□ 0.6
VAPA-204ENST00000577901 PBX2P40425 430 aa18.79■□□□□ 0.6
VAPA-204ENST00000577901 FSCN1Q16658 493 aaKnown RBP18.79■□□□□ 0.6
VAPA-204ENST00000577901 TBC1D10CQ8IV04 446 aa18.79■□□□□ 0.6
VAPA-204ENST00000577901 SLC43A3Q8NBI5 491 aa18.79■□□□□ 0.6
VAPA-204ENST00000577901 PBX4Q9BYU1 374 aa18.79■□□□□ 0.6
VAPA-204ENST00000577901 AP5M1Q9H0R1 490 aa18.79■□□□□ 0.6
VAPA-204ENST00000577901 PRR12Q9ULL5 1215 aa18.79■□□□□ 0.6
VAPA-204ENST00000577901 DDX49Q9Y6V7 483 aaKnown RBP18.79■□□□□ 0.6
VAPA-204ENST00000577901 DYNC1LI2O43237 492 aaPredicted RBP18.78■□□□□ 0.6
VAPA-204ENST00000577901 NMT2O60551 498 aa18.78■□□□□ 0.6
VAPA-204ENST00000577901 SMPD1P17405 629 aa18.78■□□□□ 0.6
VAPA-204ENST00000577901 MUM1L1Q5H9M0 696 aa18.78■□□□□ 0.6
VAPA-204ENST00000577901 CASC1Q6TDU7 716 aa18.78■□□□□ 0.6
VAPA-204ENST00000577901 RASGRP2Q7LDG7 609 aa18.78■□□□□ 0.6
VAPA-204ENST00000577901 USP38Q8NB14 1042 aa18.78■□□□□ 0.6
VAPA-204ENST00000577901 TTC14Q96N46 770 aa18.78■□□□□ 0.6
VAPA-204ENST00000577901 KRT23Q9C075 422 aa18.78■□□□□ 0.6
VAPA-204ENST00000577901 IL23AQ9NPF7 189 aa18.78■□□□□ 0.6
VAPA-204ENST00000577901 CYP39A1Q9NYL5 469 aa18.78■□□□□ 0.6
VAPA-204ENST00000577901 U3KPZ7 1027 aaPredicted RBP18.78■□□□□ 0.6
VAPA-204ENST00000577901 ZEB2O60315 1214 aa18.77■□□□□ 0.6
VAPA-204ENST00000577901 PTGS1P23219 599 aa18.77■□□□□ 0.6
VAPA-204ENST00000577901 NOVP48745 357 aa18.77■□□□□ 0.6
VAPA-204ENST00000577901 PTH1RQ03431 593 aa18.77■□□□□ 0.6
VAPA-204ENST00000577901 ITGA7Q13683 1181 aa18.77■□□□□ 0.6
VAPA-204ENST00000577901 IQSEC1Q6DN90 963 aa18.77■□□□□ 0.6
VAPA-204ENST00000577901 EEPD1Q7L9B9 569 aa18.77■□□□□ 0.6
VAPA-204ENST00000577901 FBXO16Q8IX29 292 aaPredicted RBP18.77■□□□□ 0.6
VAPA-204ENST00000577901 SYMPKQ92797 1274 aaKnown RBP18.77■□□□□ 0.6
VAPA-204ENST00000577901 HIPK3Q9H422 1215 aa18.77■□□□□ 0.6
VAPA-204ENST00000577901 CNNM2Q9H8M5 875 aa18.77■□□□□ 0.6
VAPA-204ENST00000577901 PDGFCQ9NRA1 345 aa18.77■□□□□ 0.6
VAPA-204ENST00000577901 CCPG1Q9ULG6 757 aa18.77■□□□□ 0.6
VAPA-204ENST00000577901 MTMR7Q9Y216 660 aa18.77■□□□□ 0.6
VAPA-204ENST00000577901 CHD9Q3L8U1 2897 aa18.77■□□□□ 0.6
VAPA-204ENST00000577901 GRIN2DO15399 1336 aa18.76■□□□□ 0.59
VAPA-204ENST00000577901 CCDC178Q5BJE1 867 aa18.76■□□□□ 0.59
VAPA-204ENST00000577901 TAPT1Q6NXT6 567 aa18.76■□□□□ 0.59
VAPA-204ENST00000577901 IQCA1Q86XH1 822 aa18.76■□□□□ 0.59
VAPA-204ENST00000577901 HERVK_113Q902F9 699 aa18.76■□□□□ 0.59
VAPA-204ENST00000577901 Q9Y3F1 56 aa18.76■□□□□ 0.59
VAPA-204ENST00000577901 NEDD4P46934 1319 aa18.75■□□□□ 0.59
VAPA-204ENST00000577901 LRRC37A2A6NM11 1700 aa18.75■□□□□ 0.59
VAPA-204ENST00000577901 ICAM1P05362 532 aa18.75■□□□□ 0.59
VAPA-204ENST00000577901 TOP1P11387 765 aaKnown RBP18.75■□□□□ 0.59
VAPA-204ENST00000577901 TRDNQ13061 729 aa18.75■□□□□ 0.59
VAPA-204ENST00000577901 CCDC96Q2M329 555 aa18.75■□□□□ 0.59
VAPA-204ENST00000577901 TMEM63BQ5T3F8 832 aa18.75■□□□□ 0.59
VAPA-204ENST00000577901 NSMFQ6X4W1 530 aa18.75■□□□□ 0.59
VAPA-204ENST00000577901 DCAF4Q8WV16 495 aa18.75■□□□□ 0.59
VAPA-204ENST00000577901 MAP4K1Q92918 833 aa18.75■□□□□ 0.59
VAPA-204ENST00000577901 PURBQ96QR8 312 aaKnown RBP18.75■□□□□ 0.59
VAPA-204ENST00000577901 GAS2L1Q99501 681 aaPredicted RBP18.75■□□□□ 0.59
VAPA-204ENST00000577901 ESYT1Q9BSJ8 1104 aa18.75■□□□□ 0.59
VAPA-204ENST00000577901 SEZ6LQ9BYH1 1024 aa18.75■□□□□ 0.59
VAPA-204ENST00000577901 TRPV6Q9H1D0 765 aa18.75■□□□□ 0.59
VAPA-204ENST00000577901 MTIF3Q9H2K0 278 aaKnown RBP18.75■□□□□ 0.59
VAPA-204ENST00000577901 VTA1Q9NP79 307 aa18.75■□□□□ 0.59
VAPA-204ENST00000577901 UMODL1Q5DID0 1318 aa18.74■□□□□ 0.59
VAPA-204ENST00000577901 B4E1Z4 1266 aa18.74■□□□□ 0.59
VAPA-204ENST00000577901 KDM4AO75164 1064 aa18.74■□□□□ 0.59
VAPA-204ENST00000577901 FGBP02675 491 aa18.74■□□□□ 0.59
VAPA-204ENST00000577901 PSMC6P62333 389 aa18.74■□□□□ 0.59
VAPA-204ENST00000577901 RAB30Q15771 203 aa18.74■□□□□ 0.59
VAPA-204ENST00000577901 MORC4Q8TE76 937 aa18.74■□□□□ 0.59
VAPA-204ENST00000577901 TMEM47Q9BQJ4 181 aa18.74■□□□□ 0.59
VAPA-204ENST00000577901 RANBP17Q9H2T7 1088 aaKnown RBP18.74■□□□□ 0.59
VAPA-204ENST00000577901 PRDM12Q9H4Q4 367 aa18.74■□□□□ 0.59
VAPA-204ENST00000577901 CXXC1Q9P0U4 656 aaPredicted RBP18.74■□□□□ 0.59
VAPA-204ENST00000577901 ZSWIM5Q9P217 1185 aa18.74■□□□□ 0.59
VAPA-204ENST00000577901 MSRAQ9UJ68 235 aa18.74■□□□□ 0.59
VAPA-204ENST00000577901 MUC3AQ02505 3323 aa18.74■□□□□ 0.59
VAPA-204ENST00000577901 LAMA4Q16363 1823 aa18.73■□□□□ 0.59
VAPA-204ENST00000577901 B4GALT4O60513 344 aa18.73■□□□□ 0.59
VAPA-204ENST00000577901 CDC45O75419 566 aa18.73■□□□□ 0.59
VAPA-204ENST00000577901 CYP21A2P08686 494 aa18.73■□□□□ 0.59
VAPA-204ENST00000577901 SLC16A2P36021 539 aa18.73■□□□□ 0.59
VAPA-204ENST00000577901 CCL23P55773 120 aa18.73■□□□□ 0.59
VAPA-204ENST00000577901 BAATQ14032 418 aaPredicted RBP18.73■□□□□ 0.59
VAPA-204ENST00000577901 TJAP1Q5JTD0 557 aa18.73■□□□□ 0.59
VAPA-204ENST00000577901 TTBK2Q6IQ55 1244 aa18.73■□□□□ 0.59
VAPA-204ENST00000577901 DGKHQ86XP1 1220 aa18.73■□□□□ 0.59
VAPA-204ENST00000577901 NOC4LQ9BVI4 516 aaKnown RBP18.73■□□□□ 0.59
VAPA-204ENST00000577901 ADD3Q9UEY8 706 aaKnown RBP18.73■□□□□ 0.59
VAPA-204ENST00000577901 BTNL9Q6UXG8 535 aa18.72■□□□□ 0.59
VAPA-204ENST00000577901 OTOP2Q7RTS6 562 aa18.72■□□□□ 0.59
VAPA-204ENST00000577901 PPM1EQ8WY54 764 aa18.72■□□□□ 0.59
VAPA-204ENST00000577901 ZKSCAN3Q9BRR0 538 aa18.72■□□□□ 0.59
VAPA-204ENST00000577901 WNT8AQ9H1J5 351 aa18.72■□□□□ 0.59
VAPA-204ENST00000577901 PRDM6Q9NQX0 595 aa18.72■□□□□ 0.59
VAPA-204ENST00000577901 RBM8AQ9Y5S9 174 aaKnown RBP18.72■□□□□ 0.59
VAPA-204ENST00000577901 ALDH5A1P51649 535 aaPredicted RBP18.71■□□□□ 0.59
VAPA-204ENST00000577901 DUSP28Q4G0W2 176 aa18.71■□□□□ 0.59
VAPA-204ENST00000577901 SYDE2Q5VT97 1194 aa18.71■□□□□ 0.59
VAPA-204ENST00000577901 ZSCAN10Q96SZ4 725 aaPredicted RBP18.71■□□□□ 0.59
VAPA-204ENST00000577901 UBAC1Q9BSL1 405 aa18.71■□□□□ 0.59
VAPA-204ENST00000577901 NKX2-4Q9H2Z4 354 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms