RNA–Protein interactions for RNA: ENST00000577681.1

CCL13-202, Transcript of C-C motif chemokine ligand 13, humanhuman

TSL 1 (best)

Gene CCL13, Length 669 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13-202ENST00000577681 IGHA2P01877 340 aa9.23□□□□□ -0.93
CCL13-202ENST00000577681 HOXC6P09630 235 aa9.23□□□□□ -0.93
CCL13-202ENST00000577681 SCG2P13521 617 aa9.23□□□□□ -0.93
CCL13-202ENST00000577681 FDPSP14324 419 aaKnown RBP9.23□□□□□ -0.93
CCL13-202ENST00000577681 HMGN5P82970 282 aaKnown RBP9.23□□□□□ -0.93
CCL13-202ENST00000577681 SSRP1Q08945 709 aaKnown RBP9.23□□□□□ -0.93
CCL13-202ENST00000577681 MORN1Q5T089 497 aa9.23□□□□□ -0.93
CCL13-202ENST00000577681 SNRNP48Q6IEG0 339 aaKnown RBP9.23□□□□□ -0.93
CCL13-202ENST00000577681 TRIM22Q8IYM9 498 aa9.23□□□□□ -0.93
CCL13-202ENST00000577681 CLEC4DQ8WXI8 215 aa9.23□□□□□ -0.93
CCL13-202ENST00000577681 WASF1Q92558 559 aa9.23□□□□□ -0.93
CCL13-202ENST00000577681 ERO1AQ96HE7 468 aa9.23□□□□□ -0.93
CCL13-202ENST00000577681 AGBL1Q96MI9 1066 aa9.23□□□□□ -0.93
CCL13-202ENST00000577681 LARP6Q9BRS8 491 aaKnown RBP9.23□□□□□ -0.93
CCL13-202ENST00000577681 GLT8D2Q9H1C3 349 aa9.23□□□□□ -0.93
CCL13-202ENST00000577681 RAVER2Q9HCJ3 691 aaKnown RBP9.23□□□□□ -0.93
CCL13-202ENST00000577681 VAT1LQ9HCJ6 419 aa9.23□□□□□ -0.93
CCL13-202ENST00000577681 BARHL2Q9NY43 387 aa9.23□□□□□ -0.93
CCL13-202ENST00000577681 SEC63Q9UGP8 760 aaKnown RBP9.23□□□□□ -0.93
CCL13-202ENST00000577681 GJD2Q9UKL4 321 aa9.23□□□□□ -0.93
CCL13-202ENST00000577681 DIS3Q9Y2L1 958 aaKnown RBP9.23□□□□□ -0.93
CCL13-202ENST00000577681 MRPL11Q9Y3B7 192 aaKnown RBP9.23□□□□□ -0.93
CCL13-202ENST00000577681 RIPK3Q9Y572 518 aa9.23□□□□□ -0.93
CCL13-202ENST00000577681 PCDHA1Q9Y5I3 950 aa9.23□□□□□ -0.93
CCL13-202ENST00000577681 HTTP42858 3142 aa9.23□□□□□ -0.93
CCL13-202ENST00000577681 LCTP09848 1927 aa9.23□□□□□ -0.93
CCL13-202ENST00000577681 SLC15A5A6NIM6 579 aa9.22□□□□□ -0.93
CCL13-202ENST00000577681 OPLAHO14841 1288 aa9.22□□□□□ -0.93
CCL13-202ENST00000577681 XRCC5P13010 732 aaKnown RBP9.22□□□□□ -0.93
CCL13-202ENST00000577681 PDIA4P13667 645 aaKnown RBP9.22□□□□□ -0.93
CCL13-202ENST00000577681 ERCC3P19447 782 aa9.22□□□□□ -0.93
CCL13-202ENST00000577681 PTPREP23469 700 aa9.22□□□□□ -0.93
CCL13-202ENST00000577681 HSD17B4P51659 736 aa9.22□□□□□ -0.93
CCL13-202ENST00000577681 FCGRTP55899 365 aa9.22□□□□□ -0.93
CCL13-202ENST00000577681 STK3Q13188 491 aa9.22□□□□□ -0.93
CCL13-202ENST00000577681 IRF5Q13568 498 aa9.22□□□□□ -0.93
CCL13-202ENST00000577681 GRB14Q14449 540 aa9.22□□□□□ -0.93
CCL13-202ENST00000577681 MCTP2Q6DN12 878 aa9.22□□□□□ -0.93
CCL13-202ENST00000577681 GALNT17Q6IS24 598 aa9.22□□□□□ -0.93
CCL13-202ENST00000577681 PLEKHH3Q7Z736 793 aa9.22□□□□□ -0.93
CCL13-202ENST00000577681 MCF2L2Q86YR7 1114 aa9.22□□□□□ -0.93
CCL13-202ENST00000577681 RAB11FIP4Q86YS3 637 aa9.22□□□□□ -0.93
CCL13-202ENST00000577681 CMTR1Q8N1G2 835 aaKnown RBP9.22□□□□□ -0.93
CCL13-202ENST00000577681 NECAB1Q8N987 351 aa9.22□□□□□ -0.93
CCL13-202ENST00000577681 BBXQ8WY36 941 aaPredicted RBP9.22□□□□□ -0.93
CCL13-202ENST00000577681 TRERF1Q96PN7 1200 aa9.22□□□□□ -0.93
CCL13-202ENST00000577681 PAGR1Q9BTK6 254 aa9.22□□□□□ -0.93
CCL13-202ENST00000577681 ZMYND12Q9H0C1 365 aa9.22□□□□□ -0.93
CCL13-202ENST00000577681 PORCNQ9H237 461 aa9.22□□□□□ -0.93
CCL13-202ENST00000577681 ACAD9Q9H845 621 aa9.22□□□□□ -0.93
CCL13-202ENST00000577681 RNF146Q9NTX7 359 aa9.22□□□□□ -0.93
CCL13-202ENST00000577681 CCPG1Q9ULG6 757 aa9.22□□□□□ -0.93
CCL13-202ENST00000577681 BOLA1Q9Y3E2 137 aa9.22□□□□□ -0.93
CCL13-202ENST00000577681 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.22□□□□□ -0.93
CCL13-202ENST00000577681 CTDP1Q9Y5B0 961 aaPredicted RBP9.22□□□□□ -0.93
CCL13-202ENST00000577681 PFASO15067 1338 aa9.22□□□□□ -0.93
CCL13-202ENST00000577681 CENPFP49454 3210 aa9.22□□□□□ -0.93
CCL13-202ENST00000577681 BRCA2P51587 3418 aa9.21□□□□□ -0.93
CCL13-202ENST00000577681 PTPDC1A2A3K4 754 aa9.21□□□□□ -0.94
CCL13-202ENST00000577681 STXBP3O00186 592 aa9.21□□□□□ -0.94
CCL13-202ENST00000577681 FCER1AP12319 257 aa9.21□□□□□ -0.94
CCL13-202ENST00000577681 EN2P19622 333 aaPredicted RBP9.21□□□□□ -0.94
CCL13-202ENST00000577681 CTGFP29279 349 aa9.21□□□□□ -0.94
CCL13-202ENST00000577681 AKAP17AQ02040 695 aaKnown RBP9.21□□□□□ -0.94
CCL13-202ENST00000577681 KIF22Q14807 665 aa9.21□□□□□ -0.94
CCL13-202ENST00000577681 WWC2Q6AWC2 1192 aa9.21□□□□□ -0.94
CCL13-202ENST00000577681 CCDC174Q6PII3 467 aa9.21□□□□□ -0.94
CCL13-202ENST00000577681 OTOP1Q7RTM1 612 aa9.21□□□□□ -0.94
CCL13-202ENST00000577681 GPR142Q7Z601 462 aa9.21□□□□□ -0.94
CCL13-202ENST00000577681 CCDC83Q8IWF9 413 aa9.21□□□□□ -0.94
CCL13-202ENST00000577681 CPXCR1Q8N123 301 aa9.21□□□□□ -0.94
CCL13-202ENST00000577681 MSL3Q8N5Y2 521 aaKnown RBP9.21□□□□□ -0.94
CCL13-202ENST00000577681 DAGLBQ8NCG7 672 aa9.21□□□□□ -0.94
CCL13-202ENST00000577681 CCDC12Q8WUD4 166 aaPredicted RBP9.21□□□□□ -0.94
CCL13-202ENST00000577681 SOCS4Q8WXH5 440 aa9.21□□□□□ -0.94
CCL13-202ENST00000577681 PHKBQ93100 1093 aa9.21□□□□□ -0.94
CCL13-202ENST00000577681 TRIM47Q96LD4 638 aa9.21□□□□□ -0.94
CCL13-202ENST00000577681 TMEM121BQ9BXQ6 578 aaPredicted RBP9.21□□□□□ -0.94
CCL13-202ENST00000577681 SLC26A6Q9BXS9 759 aa9.21□□□□□ -0.94
CCL13-202ENST00000577681 EFCC1Q9HA90 598 aa9.21□□□□□ -0.94
CCL13-202ENST00000577681 ORC3Q9UBD5 711 aaPredicted RBP9.21□□□□□ -0.94
CCL13-202ENST00000577681 ISY1Q9ULR0 285 aaKnown RBP9.21□□□□□ -0.94
CCL13-202ENST00000577681 NAP1L2Q9ULW6 460 aaPredicted RBP9.21□□□□□ -0.94
CCL13-202ENST00000577681 SZT2Q5T011 3432 aa9.21□□□□□ -0.94
CCL13-202ENST00000577681 ZSWIM8A7E2V4 1837 aa9.2□□□□□ -0.94
CCL13-202ENST00000577681 M0R2N6 131 aa9.2□□□□□ -0.94
CCL13-202ENST00000577681 MEIS2O14770 477 aa9.2□□□□□ -0.94
CCL13-202ENST00000577681 PEX10O60683 326 aa9.2□□□□□ -0.94
CCL13-202ENST00000577681 ALAS1P13196 640 aa9.2□□□□□ -0.94
CCL13-202ENST00000577681 HOXD10P28358 340 aa9.2□□□□□ -0.94
CCL13-202ENST00000577681 PSMC4P43686 418 aa9.2□□□□□ -0.94
CCL13-202ENST00000577681 CLK2P49760 499 aaKnown RBP9.2□□□□□ -0.94
CCL13-202ENST00000577681 MRPL12P52815 198 aaKnown RBP9.2□□□□□ -0.94
CCL13-202ENST00000577681 SNAP25P60880 206 aa9.2□□□□□ -0.94
CCL13-202ENST00000577681 PLS1Q14651 629 aa9.2□□□□□ -0.94
CCL13-202ENST00000577681 ZNF792Q3KQV3 632 aa9.2□□□□□ -0.94
CCL13-202ENST00000577681 MUM1L1Q5H9M0 696 aa9.2□□□□□ -0.94
CCL13-202ENST00000577681 TYW1BQ6NUM6 668 aa9.2□□□□□ -0.94
CCL13-202ENST00000577681 HOMER1Q86YM7 354 aa9.2□□□□□ -0.94
CCL13-202ENST00000577681 HSCBQ8IWL3 235 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms