RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 KIAA0100Q14667 2235 aaKnown RBP9.16□□□□□ -0.94
CCDC40-215ENST00000576033 ABCB11O95342 1321 aa9.15□□□□□ -0.94
CCDC40-215ENST00000576033 PNMA6FA0A0J9YX94 578 aa9.15□□□□□ -0.94
CCDC40-215ENST00000576033 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.15□□□□□ -0.94
CCDC40-215ENST00000576033 POTEB2H3BUK9 544 aa9.15□□□□□ -0.94
CCDC40-215ENST00000576033 JAK2O60674 1132 aa9.15□□□□□ -0.94
CCDC40-215ENST00000576033 CFBP00751 764 aa9.15□□□□□ -0.94
CCDC40-215ENST00000576033 GNRH1P01148 92 aa9.15□□□□□ -0.94
CCDC40-215ENST00000576033 HOXC6P09630 235 aa9.15□□□□□ -0.94
CCDC40-215ENST00000576033 HOXD10P28358 340 aa9.15□□□□□ -0.94
CCDC40-215ENST00000576033 KIF5BP33176 963 aa9.15□□□□□ -0.94
CCDC40-215ENST00000576033 EVCP57679 992 aa9.15□□□□□ -0.94
CCDC40-215ENST00000576033 RPS6P62753 249 aaKnown RBP9.15□□□□□ -0.94
CCDC40-215ENST00000576033 BECN1Q14457 450 aa9.15□□□□□ -0.94
CCDC40-215ENST00000576033 PKN1Q16512 942 aa9.15□□□□□ -0.94
CCDC40-215ENST00000576033 PKN2Q16513 984 aaKnown RBP9.15□□□□□ -0.94
CCDC40-215ENST00000576033 GJC2Q5T442 439 aaPredicted RBP9.15□□□□□ -0.94
CCDC40-215ENST00000576033 FBXO16Q8IX29 292 aaPredicted RBP9.15□□□□□ -0.94
CCDC40-215ENST00000576033 FBXL16Q8N461 479 aa9.15□□□□□ -0.94
CCDC40-215ENST00000576033 DDX11Q96FC9 970 aa9.15□□□□□ -0.94
CCDC40-215ENST00000576033 TAAR1Q96RJ0 339 aa9.15□□□□□ -0.94
CCDC40-215ENST00000576033 MAP3K14Q99558 947 aa9.15□□□□□ -0.94
CCDC40-215ENST00000576033 PCDHA1Q9Y5I3 950 aa9.15□□□□□ -0.94
CCDC40-215ENST00000576033 V9GY48 417 aaPredicted RBP9.15□□□□□ -0.94
CCDC40-215ENST00000576033 KIAA1217Q5T5P2 1943 aa9.15□□□□□ -0.95
CCDC40-215ENST00000576033 STXBP3O00186 592 aa9.14□□□□□ -0.95
CCDC40-215ENST00000576033 SNAI1O95863 264 aaPredicted RBP9.14□□□□□ -0.95
CCDC40-215ENST00000576033 CALM1P0DP23 149 aa9.14□□□□□ -0.95
CCDC40-215ENST00000576033 CALM2P0DP24 149 aa9.14□□□□□ -0.95
CCDC40-215ENST00000576033 CALM3P0DP25 149 aa9.14□□□□□ -0.95
CCDC40-215ENST00000576033 CYBAP13498 195 aa9.14□□□□□ -0.95
CCDC40-215ENST00000576033 EIF2AK2P19525 551 aaKnown RBP9.14□□□□□ -0.95
CCDC40-215ENST00000576033 EN2P19622 333 aaPredicted RBP9.14□□□□□ -0.95
CCDC40-215ENST00000576033 ALDH5A1P51649 535 aaPredicted RBP9.14□□□□□ -0.95
CCDC40-215ENST00000576033 PRMT2P55345 433 aa9.14□□□□□ -0.95
CCDC40-215ENST00000576033 MAP3K21Q5TCX8 1036 aa9.14□□□□□ -0.95
CCDC40-215ENST00000576033 USP17L6PQ6QN14 398 aa9.14□□□□□ -0.95
CCDC40-215ENST00000576033 SYNE3Q6ZMZ3 975 aa9.14□□□□□ -0.95
CCDC40-215ENST00000576033 RNF207Q6ZRF8 634 aa9.14□□□□□ -0.95
CCDC40-215ENST00000576033 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.14□□□□□ -0.95
CCDC40-215ENST00000576033 ABRAQ8N0Z2 381 aa9.14□□□□□ -0.95
CCDC40-215ENST00000576033 TMTC2Q8N394 836 aa9.14□□□□□ -0.95
CCDC40-215ENST00000576033 IL27Q8NEV9 243 aa9.14□□□□□ -0.95
CCDC40-215ENST00000576033 SYTL5Q8TDW5 730 aaPredicted RBP9.14□□□□□ -0.95
CCDC40-215ENST00000576033 RRP36Q96EU6 259 aaKnown RBP9.14□□□□□ -0.95
CCDC40-215ENST00000576033 AMNQ9BXJ7 453 aa9.14□□□□□ -0.95
CCDC40-215ENST00000576033 SLC26A6Q9BXS9 759 aa9.14□□□□□ -0.95
CCDC40-215ENST00000576033 KATNBL1Q9H079 304 aa9.14□□□□□ -0.95
CCDC40-215ENST00000576033 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.14□□□□□ -0.95
CCDC40-215ENST00000576033 RBM28Q9NW13 759 aaKnown RBP9.14□□□□□ -0.95
CCDC40-215ENST00000576033 TMEM260Q9NX78 707 aa9.14□□□□□ -0.95
CCDC40-215ENST00000576033 VPS54Q9P1Q0 977 aa9.14□□□□□ -0.95
CCDC40-215ENST00000576033 MYH7BA7E2Y1 1941 aa9.13□□□□□ -0.95
CCDC40-215ENST00000576033 MYADML2A6NDP7 307 aa9.13□□□□□ -0.95
CCDC40-215ENST00000576033 STRNO43815 780 aa9.13□□□□□ -0.95
CCDC40-215ENST00000576033 SORBS3O60504 671 aa9.13□□□□□ -0.95
CCDC40-215ENST00000576033 PFKFB2O60825 505 aa9.13□□□□□ -0.95
CCDC40-215ENST00000576033 FDX1P10109 184 aa9.13□□□□□ -0.95
CCDC40-215ENST00000576033 XRCC5P13010 732 aaKnown RBP9.13□□□□□ -0.95
CCDC40-215ENST00000576033 CNGA1P29973 690 aa9.13□□□□□ -0.95
CCDC40-215ENST00000576033 COPB2P35606 906 aa9.13□□□□□ -0.95
CCDC40-215ENST00000576033 ARHGEF6Q15052 776 aa9.13□□□□□ -0.95
CCDC40-215ENST00000576033 RABEP1Q15276 862 aa9.13□□□□□ -0.95
CCDC40-215ENST00000576033 TKFCQ3LXA3 575 aa9.13□□□□□ -0.95
CCDC40-215ENST00000576033 ARMCX2Q7L311 632 aa9.13□□□□□ -0.95
CCDC40-215ENST00000576033 FCHSD1Q86WN1 690 aa9.13□□□□□ -0.95
CCDC40-215ENST00000576033 CCDC83Q8IWF9 413 aa9.13□□□□□ -0.95
CCDC40-215ENST00000576033 RASGRP4Q8TDF6 673 aa9.13□□□□□ -0.95
CCDC40-215ENST00000576033 PXYLP1Q8TE99 480 aa9.13□□□□□ -0.95
CCDC40-215ENST00000576033 DIS3LQ8TF46 1054 aaKnown RBP9.13□□□□□ -0.95
CCDC40-215ENST00000576033 GTF3C6Q969F1 213 aa9.13□□□□□ -0.95
CCDC40-215ENST00000576033 DEFB118Q96PH6 123 aa9.13□□□□□ -0.95
CCDC40-215ENST00000576033 TINF2Q9BSI4 451 aa9.13□□□□□ -0.95
CCDC40-215ENST00000576033 RNF208Q9H0X6 261 aa9.13□□□□□ -0.95
CCDC40-215ENST00000576033 PDGFCQ9NRA1 345 aa9.13□□□□□ -0.95
CCDC40-215ENST00000576033 SEC63Q9UGP8 760 aaKnown RBP9.13□□□□□ -0.95
CCDC40-215ENST00000576033 FBXO40Q9UH90 709 aa9.13□□□□□ -0.95
CCDC40-215ENST00000576033 ZHX1Q9UKY1 873 aaPredicted RBP9.13□□□□□ -0.95
CCDC40-215ENST00000576033 PFASO15067 1338 aa9.12□□□□□ -0.95
CCDC40-215ENST00000576033 MEIS2O14770 477 aa9.12□□□□□ -0.95
CCDC40-215ENST00000576033 ARIH2O95376 493 aa9.12□□□□□ -0.95
CCDC40-215ENST00000576033 ZNF865P0CJ78 1059 aaPredicted RBP9.12□□□□□ -0.95
CCDC40-215ENST00000576033 DDIT3P35638 169 aa9.12□□□□□ -0.95
CCDC40-215ENST00000576033 HSD17B4P51659 736 aa9.12□□□□□ -0.95
CCDC40-215ENST00000576033 NAPAP54920 295 aa9.12□□□□□ -0.95
CCDC40-215ENST00000576033 OLFML2BQ68BL8 750 aa9.12□□□□□ -0.95
CCDC40-215ENST00000576033 NSUN7Q8NE18 718 aaKnown RBP9.12□□□□□ -0.95
CCDC40-215ENST00000576033 ZNF274Q96GC6 653 aaPredicted RBP9.12□□□□□ -0.95
CCDC40-215ENST00000576033 SLKQ9H2G2 1235 aaPredicted RBP9.12□□□□□ -0.95
CCDC40-215ENST00000576033 PAK6Q9NQU5 681 aaPredicted RBP9.12□□□□□ -0.95
CCDC40-215ENST00000576033 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.12□□□□□ -0.95
CCDC40-215ENST00000576033 MRPL11Q9Y3B7 192 aaKnown RBP9.12□□□□□ -0.95
CCDC40-215ENST00000576033 TELO2Q9Y4R8 837 aa9.12□□□□□ -0.95
CCDC40-215ENST00000576033 MYCNP04198 464 aaPredicted RBP9.11□□□□□ -0.95
CCDC40-215ENST00000576033 SCG2P13521 617 aa9.11□□□□□ -0.95
CCDC40-215ENST00000576033 FDPSP14324 419 aaKnown RBP9.11□□□□□ -0.95
CCDC40-215ENST00000576033 IFNAR1P17181 557 aa9.11□□□□□ -0.95
CCDC40-215ENST00000576033 ADCYAP1R1P41586 468 aa9.11□□□□□ -0.95
CCDC40-215ENST00000576033 GNAQP50148 359 aa9.11□□□□□ -0.95
CCDC40-215ENST00000576033 MNX1P50219 401 aaPredicted RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms