RNA–Protein interactions for RNA: ENST00000575333.5

TOM1L1-220, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene TOM1L1, Length 1,849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-220ENST00000575333 SLC12A4Q9UP95 1085 aa8.79□□□□□ -1
TOM1L1-220ENST00000575333 N6AMT1Q9Y5N5 214 aa8.79□□□□□ -1
TOM1L1-220ENST00000575333 MYH15Q9Y2K3 1946 aa8.79□□□□□ -1
TOM1L1-220ENST00000575333 ADCY9O60503 1353 aa8.78□□□□□ -1
TOM1L1-220ENST00000575333 SPHKAPQ2M3C7 1700 aa8.78□□□□□ -1
TOM1L1-220ENST00000575333 E7EVH7 732 aa8.78□□□□□ -1
TOM1L1-220ENST00000575333 WNT7AO00755 349 aa8.78□□□□□ -1
TOM1L1-220ENST00000575333 OPLAHO14841 1288 aa8.78□□□□□ -1
TOM1L1-220ENST00000575333 ZBED4O75132 1171 aa8.78□□□□□ -1
TOM1L1-220ENST00000575333 MTRF1O75570 445 aaKnown RBP8.78□□□□□ -1
TOM1L1-220ENST00000575333 COPB2P35606 906 aa8.78□□□□□ -1
TOM1L1-220ENST00000575333 TCF7P36402 384 aaPredicted RBP8.78□□□□□ -1
TOM1L1-220ENST00000575333 HSPA2P54652 639 aa8.78□□□□□ -1
TOM1L1-220ENST00000575333 BPIFB4P59827 614 aa8.78□□□□□ -1
TOM1L1-220ENST00000575333 LACTBP83111 547 aaPredicted RBP8.78□□□□□ -1
TOM1L1-220ENST00000575333 SPIDRQ14159 915 aa8.78□□□□□ -1
TOM1L1-220ENST00000575333 CCDC153Q494R4 210 aa8.78□□□□□ -1
TOM1L1-220ENST00000575333 CFAP58Q5T655 872 aa8.78□□□□□ -1
TOM1L1-220ENST00000575333 STK11IPQ8N1F8 1099 aa8.78□□□□□ -1
TOM1L1-220ENST00000575333 FBF1Q8TES7 1133 aa8.78□□□□□ -1
TOM1L1-220ENST00000575333 PTPRN2Q92932 1015 aa8.78□□□□□ -1
TOM1L1-220ENST00000575333 CAVIN3Q969G5 261 aa8.78□□□□□ -1
TOM1L1-220ENST00000575333 AZIN2Q96A70 460 aa8.78□□□□□ -1
TOM1L1-220ENST00000575333 ABHD8Q96I13 439 aa8.78□□□□□ -1
TOM1L1-220ENST00000575333 PGBD1Q96JS3 809 aa8.78□□□□□ -1
TOM1L1-220ENST00000575333 SNX27Q96L92 541 aa8.78□□□□□ -1
TOM1L1-220ENST00000575333 TIPINQ9BVW5 301 aa8.78□□□□□ -1
TOM1L1-220ENST00000575333 MRPL46Q9H2W6 279 aaKnown RBP8.78□□□□□ -1
TOM1L1-220ENST00000575333 HYPKQ9NX55 129 aa8.78□□□□□ -1
TOM1L1-220ENST00000575333 CTTNBP2NLQ9P2B4 639 aa8.78□□□□□ -1
TOM1L1-220ENST00000575333 LARSQ9P2J5 1176 aaKnown RBP8.78□□□□□ -1
TOM1L1-220ENST00000575333 RRP7AQ9Y3A4 280 aaKnown RBP8.78□□□□□ -1
TOM1L1-220ENST00000575333 LMTK3Q96Q04 1460 aa8.78□□□□□ -1
TOM1L1-220ENST00000575333 CEP170BQ9Y4F5 1589 aaPredicted RBP8.78□□□□□ -1
TOM1L1-220ENST00000575333 IFIT3O14879 490 aaKnown RBP8.77□□□□□ -1
TOM1L1-220ENST00000575333 ACTN4O43707 911 aaKnown RBP8.77□□□□□ -1
TOM1L1-220ENST00000575333 MGEA5O60502 916 aa8.77□□□□□ -1
TOM1L1-220ENST00000575333 PAEPP09466 180 aa8.77□□□□□ -1
TOM1L1-220ENST00000575333 PDGFRBP09619 1106 aa8.77□□□□□ -1
TOM1L1-220ENST00000575333 IFIT2P09913 472 aaKnown RBP8.77□□□□□ -1
TOM1L1-220ENST00000575333 CCDC159P0C7I6 412 aa8.77□□□□□ -1
TOM1L1-220ENST00000575333 S100A1P23297 94 aa8.77□□□□□ -1
TOM1L1-220ENST00000575333 GBP1P32455 592 aa8.77□□□□□ -1
TOM1L1-220ENST00000575333 CA8P35219 290 aa8.77□□□□□ -1
TOM1L1-220ENST00000575333 PDE6BP35913 854 aa8.77□□□□□ -1
TOM1L1-220ENST00000575333 HDGFP51858 240 aaKnown RBP8.77□□□□□ -1
TOM1L1-220ENST00000575333 NLRP12P59046 1061 aa8.77□□□□□ -1
TOM1L1-220ENST00000575333 ATP11AP98196 1134 aa8.77□□□□□ -1
TOM1L1-220ENST00000575333 AMPD2Q01433 879 aa8.77□□□□□ -1
TOM1L1-220ENST00000575333 ITIH3Q06033 890 aa8.77□□□□□ -1
TOM1L1-220ENST00000575333 PDE4BQ07343 736 aa8.77□□□□□ -1
TOM1L1-220ENST00000575333 EIF2B5Q13144 721 aaKnown RBP8.77□□□□□ -1
TOM1L1-220ENST00000575333 PARP10Q53GL7 1025 aa8.77□□□□□ -1
TOM1L1-220ENST00000575333 ANO7Q6IWH7 933 aa8.77□□□□□ -1
TOM1L1-220ENST00000575333 KLC3Q6P597 504 aa8.77□□□□□ -1
TOM1L1-220ENST00000575333 ADGRD1Q6QNK2 874 aa8.77□□□□□ -1
TOM1L1-220ENST00000575333 ANKRD13DQ6ZTN6 518 aa8.77□□□□□ -1
TOM1L1-220ENST00000575333 TAF4BQ92750 862 aa8.77□□□□□ -1
TOM1L1-220ENST00000575333 OSBPL10Q9BXB5 764 aa8.77□□□□□ -1
TOM1L1-220ENST00000575333 MAGEC2Q9UBF1 373 aaPredicted RBP8.77□□□□□ -1
TOM1L1-220ENST00000575333 RABL2AQ9UBK7 228 aaPredicted RBP8.77□□□□□ -1
TOM1L1-220ENST00000575333 CARD8Q9Y2G2 431 aa8.77□□□□□ -1
TOM1L1-220ENST00000575333 R3HDM2Q9Y2K5 976 aaKnown RBP8.77□□□□□ -1
TOM1L1-220ENST00000575333 UGGT1Q9NYU2 1555 aa8.77□□□□□ -1.01
TOM1L1-220ENST00000575333 ATP10DQ9P241 1426 aa8.77□□□□□ -1.01
TOM1L1-220ENST00000575333 HTR3EA5X5Y0 456 aa8.77□□□□□ -1.01
TOM1L1-220ENST00000575333 SPDYE5A6NIY4 337 aa8.77□□□□□ -1.01
TOM1L1-220ENST00000575333 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.77□□□□□ -1.01
TOM1L1-220ENST00000575333 RAD21O60216 631 aa8.77□□□□□ -1.01
TOM1L1-220ENST00000575333 SERPINC1P01008 464 aa8.77□□□□□ -1.01
TOM1L1-220ENST00000575333 HNRNPCP07910 306 aaKnown RBP eCLIP8.77□□□□□ -1.016e-6■■■□□ 18.7
TOM1L1-220ENST00000575333 CPA3P15088 417 aa8.77□□□□□ -1.01
TOM1L1-220ENST00000575333 ZNF131P52739 623 aa8.77□□□□□ -1.01
TOM1L1-220ENST00000575333 PDE1AP54750 535 aa8.77□□□□□ -1.01
TOM1L1-220ENST00000575333 GSTM4Q03013 218 aa8.77□□□□□ -1.01
TOM1L1-220ENST00000575333 IDI1Q13907 227 aa8.77□□□□□ -1.01
TOM1L1-220ENST00000575333 ITIH4Q14624 930 aa8.77□□□□□ -1.01
TOM1L1-220ENST00000575333 CFAP100Q494V2 611 aa8.77□□□□□ -1.01
TOM1L1-220ENST00000575333 TTMPQ5BVD1 217 aa8.77□□□□□ -1.01
TOM1L1-220ENST00000575333 ZNF569Q5MCW4 686 aa8.77□□□□□ -1.01
TOM1L1-220ENST00000575333 TMEM53Q6P2H8 277 aa8.77□□□□□ -1.01
TOM1L1-220ENST00000575333 POTEGQ6S5H5 508 aa8.77□□□□□ -1.01
TOM1L1-220ENST00000575333 TOGARAM2Q6ZUX3 1019 aa8.77□□□□□ -1.01
TOM1L1-220ENST00000575333 EXOC3L1Q86VI1 746 aa8.77□□□□□ -1.01
TOM1L1-220ENST00000575333 CCDC125Q86Z20 511 aa8.77□□□□□ -1.01
TOM1L1-220ENST00000575333 NOA1Q8NC60 698 aaKnown RBP8.77□□□□□ -1.01
TOM1L1-220ENST00000575333 PPP1R14CQ8TAE6 165 aa8.77□□□□□ -1.01
TOM1L1-220ENST00000575333 DEPTORQ8TB45 409 aa8.77□□□□□ -1.01
TOM1L1-220ENST00000575333 TRPC4APQ8TEL6 797 aa8.77□□□□□ -1.01
TOM1L1-220ENST00000575333 WDR60Q8WVS4 1066 aa8.77□□□□□ -1.01
TOM1L1-220ENST00000575333 ATP6V0A1Q93050 837 aa8.77□□□□□ -1.01
TOM1L1-220ENST00000575333 SEC16BQ96JE7 1060 aa8.77□□□□□ -1.01
TOM1L1-220ENST00000575333 IFT74Q96LB3 600 aa8.77□□□□□ -1.01
TOM1L1-220ENST00000575333 HAPLN3Q96S86 360 aa8.77□□□□□ -1.01
TOM1L1-220ENST00000575333 KRTAP3-3Q9BYR6 98 aa8.77□□□□□ -1.01
TOM1L1-220ENST00000575333 KRTAP3-2Q9BYR7 98 aa8.77□□□□□ -1.01
TOM1L1-220ENST00000575333 CARD9Q9H257 536 aa8.77□□□□□ -1.01
TOM1L1-220ENST00000575333 ZNF142P52746 1687 aaPredicted RBP8.76□□□□□ -1.01
TOM1L1-220ENST00000575333 A2ML1A8K2U0 1454 aa8.76□□□□□ -1.01
TOM1L1-220ENST00000575333 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms