RNA–Protein interactions for RNA: ENST00000574408.5

USP43-205, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 3,425 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-205ENST00000574408 TNNT1P13805 278 aa11.77□□□□□ -0.52
USP43-205ENST00000574408 CLK2P49760 499 aaKnown RBP11.77□□□□□ -0.52
USP43-205ENST00000574408 TMEM266Q2M3C6 531 aa11.77□□□□□ -0.52
USP43-205ENST00000574408 IGSF22Q8N9C0 903 aa11.77□□□□□ -0.52
USP43-205ENST00000574408 NELFBQ8WX92 580 aa11.77□□□□□ -0.52
USP43-205ENST00000574408 CALML4Q96GE6 196 aa11.77□□□□□ -0.52
USP43-205ENST00000574408 ERICH4A6NGS2 130 aa11.77□□□□□ -0.53
USP43-205ENST00000574408 ZBTB7AO95365 584 aa11.77□□□□□ -0.53
USP43-205ENST00000574408 KMT5BQ4FZB7 885 aa11.77□□□□□ -0.53
USP43-205ENST00000574408 SPICE1Q8N0Z3 855 aa11.77□□□□□ -0.53
USP43-205ENST00000574408 MMTAG2Q9BU76 263 aaKnown RBP11.77□□□□□ -0.53
USP43-205ENST00000574408 CUEDC2Q9H467 287 aa11.77□□□□□ -0.53
USP43-205ENST00000574408 HERC5Q9UII4 1024 aaKnown RBP11.77□□□□□ -0.53
USP43-205ENST00000574408 PRCPP42785 496 aa11.77□□□□□ -0.53
USP43-205ENST00000574408 CDKAL1Q5VV42 579 aa11.77□□□□□ -0.53
USP43-205ENST00000574408 CCAR2Q8N163 923 aaKnown RBP11.77□□□□□ -0.53
USP43-205ENST00000574408 GMCL1P1Q8NEA9 526 aa11.77□□□□□ -0.53
USP43-205ENST00000574408 DDX25Q9UHL0 483 aaKnown RBP11.77□□□□□ -0.53
USP43-205ENST00000574408 ZNRF3Q9ULT6 936 aa11.77□□□□□ -0.53
USP43-205ENST00000574408 A0A1B0GTH6 734 aa11.76□□□□□ -0.53
USP43-205ENST00000574408 A0A1W2PRG0 241 aa11.76□□□□□ -0.53
USP43-205ENST00000574408 POTEMA6NI47 508 aa11.76□□□□□ -0.53
USP43-205ENST00000574408 MARCH6O60337 910 aa11.76□□□□□ -0.53
USP43-205ENST00000574408 MYL1P05976 194 aa11.76□□□□□ -0.53
USP43-205ENST00000574408 SPECC1LQ69YQ0 1117 aa11.76□□□□□ -0.53
USP43-205ENST00000574408 FAM151AQ8WW52 585 aa11.76□□□□□ -0.53
USP43-205ENST00000574408 MAGEF1Q9HAY2 307 aa11.76□□□□□ -0.53
USP43-205ENST00000574408 RWDD2AQ9UIY3 292 aa11.76□□□□□ -0.53
USP43-205ENST00000574408 KLRC4O43908 158 aa11.76□□□□□ -0.53
USP43-205ENST00000574408 BMP3P12645 472 aa11.76□□□□□ -0.53
USP43-205ENST00000574408 SPDYE2Q495Y8 402 aa11.76□□□□□ -0.53
USP43-205ENST00000574408 SYDE2Q5VT97 1194 aa11.76□□□□□ -0.53
USP43-205ENST00000574408 APTXQ7Z2E3 356 aaKnown RBP11.76□□□□□ -0.53
USP43-205ENST00000574408 GMCL1Q96IK5 515 aa11.76□□□□□ -0.53
USP43-205ENST00000574408 CDK5RAP3Q96JB5 506 aa11.76□□□□□ -0.53
USP43-205ENST00000574408 RAB34Q9BZG1 259 aa11.76□□□□□ -0.53
USP43-205ENST00000574408 CGNQ9P2M7 1197 aaKnown RBP11.76□□□□□ -0.53
USP43-205ENST00000574408 COL2A1P02458 1487 aaPredicted RBP11.76□□□□□ -0.53
USP43-205ENST00000574408 TEX33O43247 280 aa11.76□□□□□ -0.53
USP43-205ENST00000574408 FXR2P51116 673 aaKnown RBP eCLIP11.76□□□□□ -0.53
USP43-205ENST00000574408 ASIC1P78348 528 aa11.76□□□□□ -0.53
USP43-205ENST00000574408 KCNB1Q14721 858 aa11.76□□□□□ -0.53
USP43-205ENST00000574408 NR1I3Q14994 352 aa11.76□□□□□ -0.53
USP43-205ENST00000574408 USH1GQ495M9 461 aa11.76□□□□□ -0.53
USP43-205ENST00000574408 PPP4R3AQ6IN85 833 aa11.76□□□□□ -0.53
USP43-205ENST00000574408 CREBRFQ8IUR6 639 aa11.76□□□□□ -0.53
USP43-205ENST00000574408 CDAN1Q8IWY9 1227 aa11.76□□□□□ -0.53
USP43-205ENST00000574408 MYRIPQ8NFW9 859 aa11.76□□□□□ -0.53
USP43-205ENST00000574408 GJA10Q969M2 543 aa11.76□□□□□ -0.53
USP43-205ENST00000574408 UIMC1Q96RL1 719 aa11.76□□□□□ -0.53
USP43-205ENST00000574408 AMNQ9BXJ7 453 aa11.76□□□□□ -0.53
USP43-205ENST00000574408 GLT8D2Q9H1C3 349 aa11.76□□□□□ -0.53
USP43-205ENST00000574408 PIM2Q9P1W9 311 aa11.76□□□□□ -0.53
USP43-205ENST00000574408 TAL1P17542 331 aaPredicted RBP11.75□□□□□ -0.53
USP43-205ENST00000574408 ECE1P42892 770 aa11.75□□□□□ -0.53
USP43-205ENST00000574408 E4F1Q66K89 784 aaPredicted RBP11.75□□□□□ -0.53
USP43-205ENST00000574408 TRIM9Q9C026 710 aa11.75□□□□□ -0.53
USP43-205ENST00000574408 TMEM39BQ9GZU3 492 aa11.75□□□□□ -0.53
USP43-205ENST00000574408 PPP1R1BQ9UD71 204 aaPredicted RBP11.75□□□□□ -0.53
USP43-205ENST00000574408 ATF5Q9Y2D1 282 aaPredicted RBP11.75□□□□□ -0.53
USP43-205ENST00000574408 CXCL9Q07325 125 aa11.75□□□□□ -0.53
USP43-205ENST00000574408 GRB10Q13322 594 aa11.75□□□□□ -0.53
USP43-205ENST00000574408 FBXO11Q86XK2 927 aa11.75□□□□□ -0.53
USP43-205ENST00000574408 ADSSL1Q8N142 457 aa11.75□□□□□ -0.53
USP43-205ENST00000574408 CCDC112Q8NEF3 446 aa11.75□□□□□ -0.53
USP43-205ENST00000574408 ACER1Q8TDN7 264 aa11.75□□□□□ -0.53
USP43-205ENST00000574408 SNX29Q8TEQ0 813 aa11.75□□□□□ -0.53
USP43-205ENST00000574408 CCDC47Q96A33 483 aaKnown RBP11.75□□□□□ -0.53
USP43-205ENST00000574408 ANO3Q9BYT9 981 aa11.75□□□□□ -0.53
USP43-205ENST00000574408 PSME4Q14997 1843 aa11.75□□□□□ -0.53
USP43-205ENST00000574408 CNTNAP1P78357 1384 aa11.75□□□□□ -0.53
USP43-205ENST00000574408 TRIM49BA6NDI0 452 aa11.74□□□□□ -0.53
USP43-205ENST00000574408 RHOBTB3O94955 611 aa11.74□□□□□ -0.53
USP43-205ENST00000574408 CCT6AP40227 531 aaKnown RBP11.74□□□□□ -0.53
USP43-205ENST00000574408 TBX2Q13207 712 aaPredicted RBP11.74□□□□□ -0.53
USP43-205ENST00000574408 STIM1Q13586 685 aa11.74□□□□□ -0.53
USP43-205ENST00000574408 PTPN14Q15678 1187 aa11.74□□□□□ -0.53
USP43-205ENST00000574408 FILIP1LQ4L180 1135 aa11.74□□□□□ -0.53
USP43-205ENST00000574408 KRT79Q5XKE5 535 aa11.74□□□□□ -0.53
USP43-205ENST00000574408 MIGA2Q7L4E1 593 aa11.74□□□□□ -0.53
USP43-205ENST00000574408 CTAGE1Q96RT6 745 aa11.74□□□□□ -0.53
USP43-205ENST00000574408 ARHGEF10LQ9HCE6 1279 aa11.74□□□□□ -0.53
USP43-205ENST00000574408 EXOC1Q9NV70 894 aa11.74□□□□□ -0.53
USP43-205ENST00000574408 ADD3Q9UEY8 706 aaKnown RBP11.74□□□□□ -0.53
USP43-205ENST00000574408 GCFC2P16383 781 aaKnown RBP11.74□□□□□ -0.53
USP43-205ENST00000574408 AMPD3Q01432 767 aa11.74□□□□□ -0.53
USP43-205ENST00000574408 PDE4DQ08499 809 aa11.74□□□□□ -0.53
USP43-205ENST00000574408 PDCL2Q8N4E4 241 aa11.74□□□□□ -0.53
USP43-205ENST00000574408 AGBL3Q8NEM8 1001 aa11.74□□□□□ -0.53
USP43-205ENST00000574408 VGLL3A8MV65 326 aa11.74□□□□□ -0.53
USP43-205ENST00000574408 ADKP55263 362 aaKnown RBP11.74□□□□□ -0.53
USP43-205ENST00000574408 KRT31Q15323 416 aa11.74□□□□□ -0.53
USP43-205ENST00000574408 HAS1Q92839 578 aa11.74□□□□□ -0.53
USP43-205ENST00000574408 PNMA5Q96PV4 448 aa11.74□□□□□ -0.53
USP43-205ENST00000574408 MAP7D2Q96T17 732 aa11.74□□□□□ -0.53
USP43-205ENST00000574408 NUDT12Q9BQG2 462 aa11.74□□□□□ -0.53
USP43-205ENST00000574408 ZBTB21Q9ULJ3 1066 aa11.74□□□□□ -0.53
USP43-205ENST00000574408 MYH7BA7E2Y1 1941 aa11.74□□□□□ -0.53
USP43-205ENST00000574408 RIOK3O14730 519 aaKnown RBP11.73□□□□□ -0.53
USP43-205ENST00000574408 PSMA7O14818 248 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms