RNA–Protein interactions for RNA: ENST00000574054.1

CHRNB1-206, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-206ENST00000574054 LAMA4Q16363 1823 aa24.77■■□□□ 1.56
CHRNB1-206ENST00000574054 LCTP09848 1927 aa24.76■■□□□ 1.55
CHRNB1-206ENST00000574054 CABYRO75952 493 aa24.76■■□□□ 1.55
CHRNB1-206ENST00000574054 NT5C2P49902 561 aa24.76■■□□□ 1.55
CHRNB1-206ENST00000574054 SMAD3P84022 425 aaKnown RBP24.76■■□□□ 1.55
CHRNB1-206ENST00000574054 TMEM63BQ5T3F8 832 aa24.76■■□□□ 1.55
CHRNB1-206ENST00000574054 ZSCAN10Q96SZ4 725 aaPredicted RBP24.76■■□□□ 1.55
CHRNB1-206ENST00000574054 WDR19Q8NEZ3 1342 aa24.76■■□□□ 1.55
CHRNB1-206ENST00000574054 MFSD5Q6N075 450 aa24.75■■□□□ 1.55
CHRNB1-206ENST00000574054 FAM126BQ8IXS8 530 aa24.75■■□□□ 1.55
CHRNB1-206ENST00000574054 WDR11Q9BZH6 1224 aa24.75■■□□□ 1.55
CHRNB1-206ENST00000574054 PPP1R12CQ9BZL4 782 aa24.75■■□□□ 1.55
CHRNB1-206ENST00000574054 PDE4AP27815 886 aa24.74■■□□□ 1.55
CHRNB1-206ENST00000574054 RPS6P62753 249 aaKnown RBP24.74■■□□□ 1.55
CHRNB1-206ENST00000574054 PDE4DQ08499 809 aa24.74■■□□□ 1.55
CHRNB1-206ENST00000574054 ITGA7Q13683 1181 aa24.74■■□□□ 1.55
CHRNB1-206ENST00000574054 ENAHQ8N8S7 591 aaPredicted RBP24.74■■□□□ 1.55
CHRNB1-206ENST00000574054 KRT23Q9C075 422 aa24.74■■□□□ 1.55
CHRNB1-206ENST00000574054 ZSWIM5Q9P217 1185 aa24.74■■□□□ 1.55
CHRNB1-206ENST00000574054 Q9Y3F1 56 aa24.74■■□□□ 1.55
CHRNB1-206ENST00000574054 TNKSO95271 1327 aa24.73■■□□□ 1.55
CHRNB1-206ENST00000574054 LOC102724159A0A0B4J2E5 919 aa24.73■■□□□ 1.55
CHRNB1-206ENST00000574054 IRX6P78412 446 aaPredicted RBP24.73■■□□□ 1.55
CHRNB1-206ENST00000574054 PPIGQ13427 754 aaKnown RBP eCLIP24.73■■□□□ 1.55
CHRNB1-206ENST00000574054 PWP2Q15269 919 aaKnown RBP24.73■■□□□ 1.55
CHRNB1-206ENST00000574054 DUSP28Q4G0W2 176 aa24.73■■□□□ 1.55
CHRNB1-206ENST00000574054 MPHOSPH6Q99547 160 aaKnown RBP24.73■■□□□ 1.55
CHRNB1-206ENST00000574054 UBAC1Q9BSL1 405 aa24.73■■□□□ 1.55
CHRNB1-206ENST00000574054 CNNM2Q9H8M5 875 aa24.73■■□□□ 1.55
CHRNB1-206ENST00000574054 DHX16O60231 1041 aaKnown RBP24.72■■□□□ 1.55
CHRNB1-206ENST00000574054 GSPT1P15170 499 aaKnown RBP24.72■■□□□ 1.55
CHRNB1-206ENST00000574054 CDC37Q16543 378 aaPredicted RBP24.72■■□□□ 1.55
CHRNB1-206ENST00000574054 ASPRV1Q53RT3 343 aa24.72■■□□□ 1.55
CHRNB1-206ENST00000574054 TTC22Q5TAA0 569 aa24.72■■□□□ 1.55
CHRNB1-206ENST00000574054 TMEM199Q8N511 208 aa24.72■■□□□ 1.55
CHRNB1-206ENST00000574054 SLC43A3Q8NBI5 491 aa24.72■■□□□ 1.55
CHRNB1-206ENST00000574054 IL25Q9H293 177 aa24.72■■□□□ 1.55
CHRNB1-206ENST00000574054 SEMA6BQ9H3T3 888 aa24.72■■□□□ 1.55
CHRNB1-206ENST00000574054 CSF2RAP15509 400 aa24.71■■□□□ 1.55
CHRNB1-206ENST00000574054 PSMC6P62333 389 aa24.71■■□□□ 1.55
CHRNB1-206ENST00000574054 ADGRF4Q8IZF3 695 aa24.71■■□□□ 1.55
CHRNB1-206ENST00000574054 ANKS1AQ92625 1134 aa24.71■■□□□ 1.55
CHRNB1-206ENST00000574054 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.71■■□□□ 1.55
CHRNB1-206ENST00000574054 GRIN2DO15399 1336 aa24.7■■□□□ 1.54
CHRNB1-206ENST00000574054 CD4P01730 458 aa24.7■■□□□ 1.54
CHRNB1-206ENST00000574054 PARP1P09874 1014 aaKnown RBP24.7■■□□□ 1.54
CHRNB1-206ENST00000574054 CYP2C18P33260 490 aa24.7■■□□□ 1.54
CHRNB1-206ENST00000574054 OR6J1Q8NGC5 347 aa24.7■■□□□ 1.54
CHRNB1-206ENST00000574054 UNC80Q8N2C7 3258 aa24.69■■□□□ 1.54
CHRNB1-206ENST00000574054 B4DLN1 442 aa24.69■■□□□ 1.54
CHRNB1-206ENST00000574054 MRPL12P52815 198 aaKnown RBP24.69■■□□□ 1.54
CHRNB1-206ENST00000574054 PPP2R5BQ15173 497 aa24.69■■□□□ 1.54
CHRNB1-206ENST00000574054 IFIT1BQ5T764 474 aaKnown RBP24.69■■□□□ 1.54
CHRNB1-206ENST00000574054 DNERQ8NFT8 737 aa24.69■■□□□ 1.54
CHRNB1-206ENST00000574054 CDX2Q99626 313 aaPredicted RBP24.69■■□□□ 1.54
CHRNB1-206ENST00000574054 TRPV6Q9H1D0 765 aa24.69■■□□□ 1.54
CHRNB1-206ENST00000574054 HIPK3Q9H422 1215 aa24.69■■□□□ 1.54
CHRNB1-206ENST00000574054 VAT1LQ9HCJ6 419 aa24.69■■□□□ 1.54
CHRNB1-206ENST00000574054 CUL9Q8IWT3 2517 aa24.69■■□□□ 1.54
CHRNB1-206ENST00000574054 ABCB11O95342 1321 aa24.68■■□□□ 1.54
CHRNB1-206ENST00000574054 RBM47A0AV96 593 aaKnown RBP24.68■■□□□ 1.54
CHRNB1-206ENST00000574054 MYL3P08590 195 aa24.68■■□□□ 1.54
CHRNB1-206ENST00000574054 ACRP10323 421 aa24.68■■□□□ 1.54
CHRNB1-206ENST00000574054 EDNRBP24530 442 aa24.68■■□□□ 1.54
CHRNB1-206ENST00000574054 CPT1AP50416 773 aa24.68■■□□□ 1.54
CHRNB1-206ENST00000574054 TMEM240Q5SV17 173 aa24.68■■□□□ 1.54
CHRNB1-206ENST00000574054 RGS22Q8NE09 1264 aa24.68■■□□□ 1.54
CHRNB1-206ENST00000574054 SCFD2Q8WU76 684 aa24.68■■□□□ 1.54
CHRNB1-206ENST00000574054 SEZ6LQ9BYH1 1024 aa24.68■■□□□ 1.54
CHRNB1-206ENST00000574054 TTYH1Q9H313 450 aaPredicted RBP24.68■■□□□ 1.54
CHRNB1-206ENST00000574054 POLR3EQ9NVU0 708 aa24.68■■□□□ 1.54
CHRNB1-206ENST00000574054 RAD50Q92878 1312 aa24.67■■□□□ 1.54
CHRNB1-206ENST00000574054 HSFX4A0A1B0GTS1 333 aaPredicted RBP24.67■■□□□ 1.54
CHRNB1-206ENST00000574054 HSFX3A0A1B0GWH4 333 aaPredicted RBP24.67■■□□□ 1.54
CHRNB1-206ENST00000574054 DLL1O00548 723 aa24.67■■□□□ 1.54
CHRNB1-206ENST00000574054 B4GALT4O60513 344 aa24.67■■□□□ 1.54
CHRNB1-206ENST00000574054 QRICH1Q2TAL8 776 aa24.67■■□□□ 1.54
CHRNB1-206ENST00000574054 BRDTQ58F21 947 aaPredicted RBP24.67■■□□□ 1.54
CHRNB1-206ENST00000574054 C16orf59Q7L2K0 433 aa24.67■■□□□ 1.54
CHRNB1-206ENST00000574054 RUFY2Q8WXA3 655 aa24.67■■□□□ 1.54
CHRNB1-206ENST00000574054 GPHNQ9NQX3 736 aaPredicted RBP24.67■■□□□ 1.54
CHRNB1-206ENST00000574054 EYSQ5T1H1 3165 aa24.67■■□□□ 1.54
CHRNB1-206ENST00000574054 PSRC1Q6PGN9 363 aaPredicted RBP24.66■■□□□ 1.54
CHRNB1-206ENST00000574054 FBXO11Q86XK2 927 aa24.66■■□□□ 1.54
CHRNB1-206ENST00000574054 TBC1D5Q92609 795 aa24.66■■□□□ 1.54
CHRNB1-206ENST00000574054 COPS5Q92905 334 aa24.66■■□□□ 1.54
CHRNB1-206ENST00000574054 UMODL1Q5DID0 1318 aa24.65■■□□□ 1.54
CHRNB1-206ENST00000574054 NKRFO15226 690 aaKnown RBP eCLIP24.65■■□□□ 1.54
CHRNB1-206ENST00000574054 TXNP10599 105 aaKnown RBP24.65■■□□□ 1.54
CHRNB1-206ENST00000574054 DNAJB2P25686 324 aa24.65■■□□□ 1.54
CHRNB1-206ENST00000574054 CCL23P55773 120 aa24.65■■□□□ 1.54
CHRNB1-206ENST00000574054 TRDNQ13061 729 aa24.65■■□□□ 1.54
CHRNB1-206ENST00000574054 ZNF365Q70YC5 407 aa24.65■■□□□ 1.54
CHRNB1-206ENST00000574054 CYB5R4Q7L1T6 521 aa24.65■■□□□ 1.54
CHRNB1-206ENST00000574054 MCF2L2Q86YR7 1114 aa24.65■■□□□ 1.54
CHRNB1-206ENST00000574054 MYLIPQ8WY64 445 aa24.65■■□□□ 1.54
CHRNB1-206ENST00000574054 JMJD4Q9H9V9 463 aa24.65■■□□□ 1.54
CHRNB1-206ENST00000574054 IL23AQ9NPF7 189 aa24.65■■□□□ 1.54
CHRNB1-206ENST00000574054 MRPL11Q9Y3B7 192 aaKnown RBP24.65■■□□□ 1.54
CHRNB1-206ENST00000574054 PRUNE2Q8WUY3 3088 aa24.65■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms