RNA–Protein interactions for RNA: ENST00000574022.1

CHD3-217, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 103 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-217ENST00000574022 TMPRSS13Q9BYE2 586 aa2.65□□□□□ -1.99
CHD3-217ENST00000574022 PRDM14Q9GZV8 571 aa2.65□□□□□ -1.99
CHD3-217ENST00000574022 EMC7Q9NPA0 242 aa2.65□□□□□ -1.99
CHD3-217ENST00000574022 PRDM6Q9NQX0 595 aa2.65□□□□□ -1.99
CHD3-217ENST00000574022 AAASQ9NRG9 546 aa2.65□□□□□ -1.99
CHD3-217ENST00000574022 SPTLC3Q9NUV7 552 aa2.65□□□□□ -1.99
CHD3-217ENST00000574022 MKS1Q9NXB0 559 aa2.65□□□□□ -1.99
CHD3-217ENST00000574022 KCNK4Q9NYG8 393 aa2.65□□□□□ -1.99
CHD3-217ENST00000574022 B4GALT6Q9UBX8 382 aa2.65□□□□□ -1.99
CHD3-217ENST00000574022 SAP30BPQ9UHR5 308 aaKnown RBP2.65□□□□□ -1.99
CHD3-217ENST00000574022 PUF60Q9UHX1 559 aaKnown RBP2.65□□□□□ -1.99
CHD3-217ENST00000574022 RNF112Q9ULX5 631 aa2.65□□□□□ -1.99
CHD3-217ENST00000574022 AP4E1Q9UPM8 1137 aa2.65□□□□□ -1.99
CHD3-217ENST00000574022 FAM50BQ9Y247 325 aa2.65□□□□□ -1.99
CHD3-217ENST00000574022 COL17A1Q9UMD9 1497 aaPredicted RBP2.65□□□□□ -1.99
CHD3-217ENST00000574022 PTPDC1A2A3K4 754 aa2.64□□□□□ -1.99
CHD3-217ENST00000574022 KLHL33A6NCF5 533 aa2.64□□□□□ -1.99
CHD3-217ENST00000574022 RASSF10A6NK89 507 aa2.64□□□□□ -1.99
CHD3-217ENST00000574022 FZD9O00144 591 aa2.64□□□□□ -1.99
CHD3-217ENST00000574022 ARVCFO00192 962 aa2.64□□□□□ -1.99
CHD3-217ENST00000574022 DLL1O00548 723 aa2.64□□□□□ -1.99
CHD3-217ENST00000574022 APAF1O14727 1248 aa2.64□□□□□ -1.99
CHD3-217ENST00000574022 TBX3O15119 743 aa2.64□□□□□ -1.99
CHD3-217ENST00000574022 ST8SIA5O15466 376 aa2.64□□□□□ -1.99
CHD3-217ENST00000574022 IL33O95760 270 aa2.64□□□□□ -1.99
CHD3-217ENST00000574022 RBP3P10745 1247 aa2.64□□□□□ -1.99
CHD3-217ENST00000574022 DRD2P14416 443 aa2.64□□□□□ -1.99
CHD3-217ENST00000574022 ATP2A2P16615 1042 aaKnown RBP2.64□□□□□ -1.99
CHD3-217ENST00000574022 LPOP22079 712 aaPredicted RBP2.64□□□□□ -1.99
CHD3-217ENST00000574022 ETV3P41162 512 aa2.64□□□□□ -1.99
CHD3-217ENST00000574022 ASPAP45381 313 aa2.64□□□□□ -1.99
CHD3-217ENST00000574022 POU4F1Q01851 419 aa2.64□□□□□ -1.99
CHD3-217ENST00000574022 POU5F1BQ06416 359 aa2.64□□□□□ -1.99
CHD3-217ENST00000574022 SOX4Q06945 474 aaPredicted RBP2.64□□□□□ -1.99
CHD3-217ENST00000574022 CYP4F3Q08477 520 aa2.64□□□□□ -1.99
CHD3-217ENST00000574022 SCRN1Q12765 414 aa2.64□□□□□ -1.99
CHD3-217ENST00000574022 PAK1Q13153 545 aa2.64□□□□□ -1.99
CHD3-217ENST00000574022 ODF1Q14990 250 aa2.64□□□□□ -1.99
CHD3-217ENST00000574022 DDB1Q16531 1140 aa2.64□□□□□ -1.99
CHD3-217ENST00000574022 FOXD4L6Q3SYB3 417 aaPredicted RBP2.64□□□□□ -1.99
CHD3-217ENST00000574022 TMEM177Q53S58 311 aa2.64□□□□□ -1.99
CHD3-217ENST00000574022 FAM47CQ5HY64 1035 aa2.64□□□□□ -1.99
CHD3-217ENST00000574022 TMEM240Q5SV17 173 aa2.64□□□□□ -1.99
CHD3-217ENST00000574022 FAM83BQ5T0W9 1011 aa2.64□□□□□ -1.99
CHD3-217ENST00000574022 GPR158Q5T848 1215 aa2.64□□□□□ -1.99
CHD3-217ENST00000574022 ACBD5Q5T8D3 534 aaPredicted RBP2.64□□□□□ -1.99
CHD3-217ENST00000574022 EFCAB2Q5VUJ9 269 aa2.64□□□□□ -1.99
CHD3-217ENST00000574022 LETMD1Q6P1Q0 360 aa2.64□□□□□ -1.99
CHD3-217ENST00000574022 RSPO2Q6UXX9 243 aaPredicted RBP2.64□□□□□ -1.99
CHD3-217ENST00000574022 FOXD4L3Q6VB84 417 aaPredicted RBP2.64□□□□□ -1.99
CHD3-217ENST00000574022 C8orf86Q6ZUL3 223 aa2.64□□□□□ -1.99
CHD3-217ENST00000574022 PODNQ7Z5L7 613 aa2.64□□□□□ -1.99
CHD3-217ENST00000574022 CDH24Q86UP0 819 aa2.64□□□□□ -1.99
CHD3-217ENST00000574022 DMRTC2Q8IXT2 367 aaPredicted RBP2.64□□□□□ -1.99
CHD3-217ENST00000574022 PPIL6Q8IXY8 311 aa2.64□□□□□ -1.99
CHD3-217ENST00000574022 SMYD4Q8IYR2 804 aaPredicted RBP2.64□□□□□ -1.99
CHD3-217ENST00000574022 PAF1Q8N7H5 531 aa2.64□□□□□ -1.99
CHD3-217ENST00000574022 GOLGA6L1Q8N7Z2 621 aa2.64□□□□□ -1.99
CHD3-217ENST00000574022 ENAHQ8N8S7 591 aaPredicted RBP2.64□□□□□ -1.99
CHD3-217ENST00000574022 C12orf50Q8NA57 414 aaPredicted RBP2.64□□□□□ -1.99
CHD3-217ENST00000574022 CHST14Q8NCH0 376 aa2.64□□□□□ -1.99
CHD3-217ENST00000574022 CLRN3Q8NCR9 226 aa2.64□□□□□ -1.99
CHD3-217ENST00000574022 MYRIPQ8NFW9 859 aa2.64□□□□□ -1.99
CHD3-217ENST00000574022 DNAJB8Q8NHS0 232 aa2.64□□□□□ -1.99
CHD3-217ENST00000574022 PCDH19Q8TAB3 1148 aa2.64□□□□□ -1.99
CHD3-217ENST00000574022 PUM2Q8TB72 1066 aaKnown RBP eCLIP2.64□□□□□ -1.99
CHD3-217ENST00000574022 UBASH3BQ8TF42 649 aa2.64□□□□□ -1.99
CHD3-217ENST00000574022 RNF141Q8WVD5 230 aa2.64□□□□□ -1.99
CHD3-217ENST00000574022 SLC5A5Q92911 643 aa2.64□□□□□ -1.99
CHD3-217ENST00000574022 AIFM3Q96NN9 605 aa2.64□□□□□ -1.99
CHD3-217ENST00000574022 NUP88Q99567 741 aaPredicted RBP2.64□□□□□ -1.99
CHD3-217ENST00000574022 ELAC2Q9BQ52 826 aaKnown RBP2.64□□□□□ -1.99
CHD3-217ENST00000574022 ALG1Q9BT22 464 aa2.64□□□□□ -1.99
CHD3-217ENST00000574022 ASPNQ9BXN1 380 aa2.64□□□□□ -1.99
CHD3-217ENST00000574022 LDHAL6BQ9BYZ2 381 aaPredicted RBP2.64□□□□□ -1.99
CHD3-217ENST00000574022 CELF4Q9BZC1 486 aaKnown RBP2.64□□□□□ -1.99
CHD3-217ENST00000574022 CYP4F12Q9HCS2 524 aa2.64□□□□□ -1.99
CHD3-217ENST00000574022 PTPRHQ9HD43 1115 aa2.64□□□□□ -1.99
CHD3-217ENST00000574022 GPRC5CQ9NQ84 441 aa2.64□□□□□ -1.99
CHD3-217ENST00000574022 ANLNQ9NQW6 1124 aa2.64□□□□□ -1.99
CHD3-217ENST00000574022 GPR27Q9NS67 375 aa2.64□□□□□ -1.99
CHD3-217ENST00000574022 MBIPQ9NS73 344 aa2.64□□□□□ -1.99
CHD3-217ENST00000574022 C14orf119Q9NWQ9 140 aa2.64□□□□□ -1.99
CHD3-217ENST00000574022 GFOD1Q9NXC2 390 aa2.64□□□□□ -1.99
CHD3-217ENST00000574022 PRR13Q9NZ81 148 aa2.64□□□□□ -1.99
CHD3-217ENST00000574022 BCCIPQ9P287 314 aaKnown RBP eCLIP2.64□□□□□ -1.99
CHD3-217ENST00000574022 ANAPC4Q9UJX5 808 aa2.64□□□□□ -1.99
CHD3-217ENST00000574022 PCOLCE2Q9UKZ9 415 aa2.64□□□□□ -1.99
CHD3-217ENST00000574022 COQ6Q9Y2Z9 468 aa2.64□□□□□ -1.99
CHD3-217ENST00000574022 KRBA1A5PL33 1030 aa2.63□□□□□ -1.99
CHD3-217ENST00000574022 C2orf71A6NGG8 1288 aa2.63□□□□□ -1.99
CHD3-217ENST00000574022 GOLGA8AA7E2F4 631 aa2.63□□□□□ -1.99
CHD3-217ENST00000574022 GOLGA8BA8MQT2 603 aa2.63□□□□□ -1.99
CHD3-217ENST00000574022 MEIS1O00470 390 aa2.63□□□□□ -1.99
CHD3-217ENST00000574022 GSTA4O15217 222 aa2.63□□□□□ -1.99
CHD3-217ENST00000574022 MEFVO15553 781 aaPredicted RBP2.63□□□□□ -1.99
CHD3-217ENST00000574022 XPOTO43592 962 aaKnown RBP2.63□□□□□ -1.99
CHD3-217ENST00000574022 AP1G1O43747 822 aa2.63□□□□□ -1.99
CHD3-217ENST00000574022 PCDHGA12O60330 932 aa2.63□□□□□ -1.99
CHD3-217ENST00000574022 GFRA3O60609 400 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms