RNA–Protein interactions for RNA: ENST00000573857.5

TVP23A-208, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-208ENST00000573857 TMEM63BQ5T3F8 832 aa16.79■□□□□ 0.28
TVP23A-208ENST00000573857 GPATCH4Q5T3I0 446 aaKnown RBP16.79■□□□□ 0.28
TVP23A-208ENST00000573857 SLC30A10Q6XR72 485 aa16.79■□□□□ 0.28
TVP23A-208ENST00000573857 KIAA1211Q6ZU35 1233 aa16.79■□□□□ 0.28
TVP23A-208ENST00000573857 DGKHQ86XP1 1220 aa16.79■□□□□ 0.28
TVP23A-208ENST00000573857 ZKSCAN3Q9BRR0 538 aa16.79■□□□□ 0.28
TVP23A-208ENST00000573857 TTYH1Q9H313 450 aaPredicted RBP16.79■□□□□ 0.28
TVP23A-208ENST00000573857 HIP1O00291 1037 aa16.78■□□□□ 0.28
TVP23A-208ENST00000573857 CALML3P27482 149 aa16.78■□□□□ 0.28
TVP23A-208ENST00000573857 ITGA7Q13683 1181 aa16.78■□□□□ 0.28
TVP23A-208ENST00000573857 RNF207Q6ZRF8 634 aa16.78■□□□□ 0.28
TVP23A-208ENST00000573857 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.78■□□□□ 0.28
TVP23A-208ENST00000573857 PPP1R12CQ9BZL4 782 aa16.78■□□□□ 0.28
TVP23A-208ENST00000573857 GRIN2DO15399 1336 aa16.77■□□□□ 0.28
TVP23A-208ENST00000573857 TMEM265A0A087WTH1 108 aa16.77■□□□□ 0.28
TVP23A-208ENST00000573857 KDM4AO75164 1064 aa16.77■□□□□ 0.28
TVP23A-208ENST00000573857 CENPBP07199 599 aaPredicted RBP16.77■□□□□ 0.28
TVP23A-208ENST00000573857 GOLGA8HP0CJ92 632 aa16.77■□□□□ 0.28
TVP23A-208ENST00000573857 CSF2RAP15509 400 aa16.77■□□□□ 0.28
TVP23A-208ENST00000573857 DUSP28Q4G0W2 176 aa16.77■□□□□ 0.28
TVP23A-208ENST00000573857 CCDC178Q5BJE1 867 aa16.77■□□□□ 0.28
TVP23A-208ENST00000573857 C16orf59Q7L2K0 433 aa16.77■□□□□ 0.28
TVP23A-208ENST00000573857 IQCA1Q86XH1 822 aa16.77■□□□□ 0.28
TVP23A-208ENST00000573857 TMEM199Q8N511 208 aa16.77■□□□□ 0.28
TVP23A-208ENST00000573857 DSCC1Q9BVC3 393 aa16.77■□□□□ 0.28
TVP23A-208ENST00000573857 WDR11Q9BZH6 1224 aa16.77■□□□□ 0.28
TVP23A-208ENST00000573857 LAMA4Q16363 1823 aa16.76■□□□□ 0.27
TVP23A-208ENST00000573857 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.76■□□□□ 0.27
TVP23A-208ENST00000573857 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.76■□□□□ 0.27
TVP23A-208ENST00000573857 RPS6P62753 249 aaKnown RBP16.76■□□□□ 0.27
TVP23A-208ENST00000573857 TMEM240Q5SV17 173 aa16.76■□□□□ 0.27
TVP23A-208ENST00000573857 PNMA1Q8ND90 353 aa16.76■□□□□ 0.27
TVP23A-208ENST00000573857 SEZ6LQ9BYH1 1024 aa16.76■□□□□ 0.27
TVP23A-208ENST00000573857 UBA5Q9GZZ9 404 aa16.76■□□□□ 0.27
TVP23A-208ENST00000573857 RBM47A0AV96 593 aaKnown RBP16.75■□□□□ 0.27
TVP23A-208ENST00000573857 B4E1Z4 1266 aa16.75■□□□□ 0.27
TVP23A-208ENST00000573857 EDNRBP24530 442 aa16.75■□□□□ 0.27
TVP23A-208ENST00000573857 DNAJB2P25686 324 aa16.75■□□□□ 0.27
TVP23A-208ENST00000573857 CYP2C18P33260 490 aa16.75■□□□□ 0.27
TVP23A-208ENST00000573857 PSMC6P62333 389 aa16.75■□□□□ 0.27
TVP23A-208ENST00000573857 PDE4DQ08499 809 aa16.75■□□□□ 0.27
TVP23A-208ENST00000573857 USH1GQ495M9 461 aa16.75■□□□□ 0.27
TVP23A-208ENST00000573857 ENAHQ8N8S7 591 aaPredicted RBP16.75■□□□□ 0.27
TVP23A-208ENST00000573857 DNERQ8NFT8 737 aa16.75■□□□□ 0.27
TVP23A-208ENST00000573857 MYLIPQ8WY64 445 aa16.75■□□□□ 0.27
TVP23A-208ENST00000573857 ANKS1AQ92625 1134 aa16.75■□□□□ 0.27
TVP23A-208ENST00000573857 ZSCAN10Q96SZ4 725 aaPredicted RBP16.75■□□□□ 0.27
TVP23A-208ENST00000573857 CPVLQ9H3G5 476 aa16.75■□□□□ 0.27
TVP23A-208ENST00000573857 HIPK3Q9H422 1215 aa16.75■□□□□ 0.27
TVP23A-208ENST00000573857 KAT14Q9H8E8 782 aa16.75■□□□□ 0.27
TVP23A-208ENST00000573857 CHD9Q3L8U1 2897 aa16.74■□□□□ 0.27
TVP23A-208ENST00000573857 B4GALT4O60513 344 aa16.74■□□□□ 0.27
TVP23A-208ENST00000573857 ACRP10323 421 aa16.74■□□□□ 0.27
TVP23A-208ENST00000573857 IMMTQ16891 758 aaKnown RBP16.74■□□□□ 0.27
TVP23A-208ENST00000573857 RASIP1Q5U651 963 aa16.74■□□□□ 0.27
TVP23A-208ENST00000573857 PSRC1Q6PGN9 363 aaPredicted RBP16.74■□□□□ 0.27
TVP23A-208ENST00000573857 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.74■□□□□ 0.27
TVP23A-208ENST00000573857 RGS22Q8NE09 1264 aa16.74■□□□□ 0.27
TVP23A-208ENST00000573857 MAFAQ8NHW3 353 aaPredicted RBP16.74■□□□□ 0.27
TVP23A-208ENST00000573857 MPHOSPH6Q99547 160 aaKnown RBP16.74■□□□□ 0.27
TVP23A-208ENST00000573857 TRPV6Q9H1D0 765 aa16.74■□□□□ 0.27
TVP23A-208ENST00000573857 ZSWIM5Q9P217 1185 aa16.74■□□□□ 0.27
TVP23A-208ENST00000573857 CTNNA3Q9UI47 895 aa16.74■□□□□ 0.27
TVP23A-208ENST00000573857 UMODL1Q5DID0 1318 aa16.73■□□□□ 0.27
TVP23A-208ENST00000573857 CPT1AP50416 773 aa16.73■□□□□ 0.27
TVP23A-208ENST00000573857 PPP2R5BQ15173 497 aa16.73■□□□□ 0.27
TVP23A-208ENST00000573857 CDC37Q16543 378 aaPredicted RBP16.73■□□□□ 0.27
TVP23A-208ENST00000573857 ASPRV1Q53RT3 343 aa16.73■□□□□ 0.27
TVP23A-208ENST00000573857 ZNF365Q70YC5 407 aa16.73■□□□□ 0.27
TVP23A-208ENST00000573857 ADGRF4Q8IZF3 695 aa16.73■□□□□ 0.27
TVP23A-208ENST00000573857 OR6J1Q8NGC5 347 aa16.73■□□□□ 0.27
TVP23A-208ENST00000573857 KRT23Q9C075 422 aa16.73■□□□□ 0.27
TVP23A-208ENST00000573857 IL25Q9H293 177 aa16.73■□□□□ 0.27
TVP23A-208ENST00000573857 IL23AQ9NPF7 189 aa16.73■□□□□ 0.27
TVP23A-208ENST00000573857 POLR3EQ9NVU0 708 aa16.73■□□□□ 0.27
TVP23A-208ENST00000573857 TNKSO95271 1327 aa16.72■□□□□ 0.27
TVP23A-208ENST00000573857 NKRFO15226 690 aaKnown RBP eCLIP16.72■□□□□ 0.27
TVP23A-208ENST00000573857 FOSL2P15408 326 aa16.72■□□□□ 0.27
TVP23A-208ENST00000573857 PURAQ00577 322 aaKnown RBP16.72■□□□□ 0.27
TVP23A-208ENST00000573857 SCFD2Q8WU76 684 aa16.72■□□□□ 0.27
TVP23A-208ENST00000573857 TIFAQ96CG3 184 aa16.72■□□□□ 0.27
TVP23A-208ENST00000573857 NOC4LQ9BVI4 516 aaKnown RBP16.72■□□□□ 0.27
TVP23A-208ENST00000573857 MAF1Q9H063 256 aa16.72■□□□□ 0.27
TVP23A-208ENST00000573857 ALDH8A1Q9H2A2 487 aaPredicted RBP16.72■□□□□ 0.27
TVP23A-208ENST00000573857 CNNM2Q9H8M5 875 aa16.72■□□□□ 0.27
TVP23A-208ENST00000573857 SUPT16HQ9Y5B9 1047 aaKnown RBP16.72■□□□□ 0.27
TVP23A-208ENST00000573857 CHD7Q9P2D1 2997 aa16.72■□□□□ 0.27
TVP23A-208ENST00000573857 ABCB11O95342 1321 aa16.71■□□□□ 0.27
TVP23A-208ENST00000573857 RAD50Q92878 1312 aa16.71■□□□□ 0.27
TVP23A-208ENST00000573857 B4DLN1 442 aa16.71■□□□□ 0.27
TVP23A-208ENST00000573857 MYL3P08590 195 aa16.71■□□□□ 0.27
TVP23A-208ENST00000573857 GSPT1P15170 499 aaKnown RBP16.71■□□□□ 0.27
TVP23A-208ENST00000573857 PDE4AP27815 886 aa16.71■□□□□ 0.27
TVP23A-208ENST00000573857 MRPL12P52815 198 aaKnown RBP16.71■□□□□ 0.27
TVP23A-208ENST00000573857 CCL23P55773 120 aa16.71■□□□□ 0.27
TVP23A-208ENST00000573857 HERVK_113Q902F9 699 aa16.71■□□□□ 0.27
TVP23A-208ENST00000573857 UBAC1Q9BSL1 405 aa16.71■□□□□ 0.27
TVP23A-208ENST00000573857 MTG1Q9BT17 334 aaPredicted RBP16.71■□□□□ 0.27
TVP23A-208ENST00000573857 WNT8AQ9H1J5 351 aa16.71■□□□□ 0.27
TVP23A-208ENST00000573857 GRXCR1A8MXD5 290 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms