RNA–Protein interactions for RNA: ENST00000573667.1

ABR-222, Transcript of ABR, RhoGEF and GTPase activating protein, human

TSL 4

Gene ABR, Length 560 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABR-222	ENST00000573667	JMJD4	Q9H9V9	463 aa		13.9	□□□□□ -0.18
ABR-222	ENST00000573667	PRDM5	Q9NQX1	630 aa	Predicted RBP	13.9	□□□□□ -0.18
ABR-222	ENST00000573667	MAD2L2	Q9UI95	211 aa		13.9	□□□□□ -0.18
ABR-222	ENST00000573667	MRPL11	Q9Y3B7	192 aa	Known RBP	13.9	□□□□□ -0.18
ABR-222	ENST00000573667	TAF6L	Q9Y6J9	622 aa		13.9	□□□□□ -0.18
ABR-222	ENST00000573667	DNAH12	Q6ZR08	3092 aa		13.9	□□□□□ -0.18
ABR-222	ENST00000573667	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	13.89	□□□□□ -0.19
ABR-222	ENST00000573667	PALM3	A6NDB9	673 aa	Predicted RBP	13.89	□□□□□ -0.19
ABR-222	ENST00000573667	SLC27A2	O14975	620 aa		13.89	□□□□□ -0.19
ABR-222	ENST00000573667	ADCY6	O43306	1168 aa		13.89	□□□□□ -0.19
ABR-222	ENST00000573667	ASGR1	P07306	291 aa		13.89	□□□□□ -0.19
ABR-222	ENST00000573667	MAGEA10	P43363	369 aa	Predicted RBP	13.89	□□□□□ -0.19
ABR-222	ENST00000573667	TRAF1	Q13077	416 aa		13.89	□□□□□ -0.19
ABR-222	ENST00000573667	GRM4	Q14833	912 aa		13.89	□□□□□ -0.19
ABR-222	ENST00000573667	SNX17	Q15036	470 aa		13.89	□□□□□ -0.19
ABR-222	ENST00000573667	NECTIN1	Q15223	517 aa		13.89	□□□□□ -0.19
ABR-222	ENST00000573667	CREB3L3	Q68CJ9	461 aa		13.89	□□□□□ -0.19
ABR-222	ENST00000573667	NFXL1	Q6ZNB6	911 aa		13.89	□□□□□ -0.19
ABR-222	ENST00000573667	TLK2	Q86UE8	772 aa		13.89	□□□□□ -0.19
ABR-222	ENST00000573667	TMTC2	Q8N394	836 aa		13.89	□□□□□ -0.19
ABR-222	ENST00000573667	MORC4	Q8TE76	937 aa		13.89	□□□□□ -0.19
ABR-222	ENST00000573667	VTI1A	Q96AJ9	217 aa		13.89	□□□□□ -0.19
ABR-222	ENST00000573667	UBE2O	Q9C0C9	1292 aa	Known RBP	13.89	□□□□□ -0.19
ABR-222	ENST00000573667	UPF3A	Q9H1J1	476 aa	Known RBP	13.89	□□□□□ -0.19
ABR-222	ENST00000573667	PRO3102	Q9H379	93 aa		13.89	□□□□□ -0.19
ABR-222	ENST00000573667	MYADML2	A6NDP7	307 aa		13.88	□□□□□ -0.19
ABR-222	ENST00000573667	CCDC69	A6NI79	296 aa		13.88	□□□□□ -0.19
ABR-222	ENST00000573667	ZBTB5	O15062	677 aa		13.88	□□□□□ -0.19
ABR-222	ENST00000573667	PRC1	O43663	620 aa		13.88	□□□□□ -0.19
ABR-222	ENST00000573667	ZEB2	O60315	1214 aa		13.88	□□□□□ -0.19
ABR-222	ENST00000573667	FXR1	P51114	621 aa	Known RBP eCLIP	13.88	□□□□□ -0.19
ABR-222	ENST00000573667	ANTXR2	P58335	489 aa		13.88	□□□□□ -0.19
ABR-222	ENST00000573667	MDM2	Q00987	491 aa	Predicted RBP	13.88	□□□□□ -0.19
ABR-222	ENST00000573667	TAPT1	Q6NXT6	567 aa		13.88	□□□□□ -0.19
ABR-222	ENST00000573667	HOMER1	Q86YM7	354 aa		13.88	□□□□□ -0.19
ABR-222	ENST00000573667	CTCFL	Q8NI51	663 aa	Predicted RBP	13.88	□□□□□ -0.19
ABR-222	ENST00000573667	IGDCC4	Q8TDY8	1250 aa		13.88	□□□□□ -0.19
ABR-222	ENST00000573667	TMEM87B	Q96K49	555 aa		13.88	□□□□□ -0.19
ABR-222	ENST00000573667	PDGFC	Q9NRA1	345 aa		13.88	□□□□□ -0.19
ABR-222	ENST00000573667	GNE	Q9Y223	722 aa	Known RBP	13.88	□□□□□ -0.19
ABR-222	ENST00000573667		Q9Y3F1	56 aa		13.88	□□□□□ -0.19
ABR-222	ENST00000573667	DDX49	Q9Y6V7	483 aa	Known RBP	13.88	□□□□□ -0.19
ABR-222	ENST00000573667	MROH7	Q68CQ1	1323 aa		13.88	□□□□□ -0.19
ABR-222	ENST00000573667	DYNC1LI2	O43237	492 aa	Predicted RBP	13.87	□□□□□ -0.19
ABR-222	ENST00000573667	PQBP1	O60828	265 aa	Known RBP	13.87	□□□□□ -0.19
ABR-222	ENST00000573667	DDAH1	O94760	285 aa		13.87	□□□□□ -0.19
ABR-222	ENST00000573667	CFB	P00751	764 aa		13.87	□□□□□ -0.19
ABR-222	ENST00000573667	SMPD1	P17405	629 aa		13.87	□□□□□ -0.19
ABR-222	ENST00000573667	KIF5B	P33176	963 aa		13.87	□□□□□ -0.19
ABR-222	ENST00000573667	TROAP	Q12815	778 aa		13.87	□□□□□ -0.19
ABR-222	ENST00000573667	ZNF654	Q8IZM8	581 aa		13.87	□□□□□ -0.19
ABR-222	ENST00000573667	SENP2	Q9HC62	589 aa		13.87	□□□□□ -0.19
ABR-222	ENST00000573667	PCDHA1	Q9Y5I3	950 aa		13.87	□□□□□ -0.19
ABR-222	ENST00000573667	ELP1	O95163	1332 aa		13.87	□□□□□ -0.19
ABR-222	ENST00000573667	DCDC2C	A8MYV0	355 aa		13.86	□□□□□ -0.19
ABR-222	ENST00000573667	CLTB	P09497	229 aa		13.86	□□□□□ -0.19
ABR-222	ENST00000573667	CALM1	P0DP23	149 aa		13.86	□□□□□ -0.19
ABR-222	ENST00000573667	CALM2	P0DP24	149 aa		13.86	□□□□□ -0.19
ABR-222	ENST00000573667	CALM3	P0DP25	149 aa		13.86	□□□□□ -0.19
ABR-222	ENST00000573667	BEX3	Q00994	111 aa		13.86	□□□□□ -0.19
ABR-222	ENST00000573667	TLE2	Q04725	743 aa		13.86	□□□□□ -0.19
ABR-222	ENST00000573667	FSCN1	Q16658	493 aa	Known RBP	13.86	□□□□□ -0.19
ABR-222	ENST00000573667	DUSP28	Q4G0W2	176 aa		13.86	□□□□□ -0.19
ABR-222	ENST00000573667	ARHGEF16	Q5VV41	709 aa		13.86	□□□□□ -0.19
ABR-222	ENST00000573667	CCSAP	Q6IQ19	270 aa	Predicted RBP	13.86	□□□□□ -0.19
ABR-222	ENST00000573667	TDH	Q8IZJ6	230 aa		13.86	□□□□□ -0.19
ABR-222	ENST00000573667	NSUN6	Q8TEA1	469 aa	Known RBP	13.86	□□□□□ -0.19
ABR-222	ENST00000573667	MTMR8	Q96EF0	704 aa		13.86	□□□□□ -0.19
ABR-222	ENST00000573667	MAP3K14	Q99558	947 aa		13.86	□□□□□ -0.19
ABR-222	ENST00000573667	WDR11	Q9BZH6	1224 aa		13.86	□□□□□ -0.19
ABR-222	ENST00000573667	RIOX1	Q9H6W3	641 aa		13.86	□□□□□ -0.19
ABR-222	ENST00000573667	LY9	Q9HBG7	655 aa		13.86	□□□□□ -0.19
ABR-222	ENST00000573667	MAP3K20	Q9NYL2	800 aa	Known RBP	13.86	□□□□□ -0.19
ABR-222	ENST00000573667		A0A0U1RQG5	324 aa	Predicted RBP	13.85	□□□□□ -0.19
ABR-222	ENST00000573667	SH2B2	O14492	632 aa	Predicted RBP	13.85	□□□□□ -0.19
ABR-222	ENST00000573667	NKRF	O15226	690 aa	Known RBP eCLIP	13.85	□□□□□ -0.19
ABR-222	ENST00000573667	CABYR	O75952	493 aa		13.85	□□□□□ -0.19
ABR-222	ENST00000573667	EDNRB	P24530	442 aa		13.85	□□□□□ -0.19
ABR-222	ENST00000573667	GNAQ	P50148	359 aa		13.85	□□□□□ -0.19
ABR-222	ENST00000573667	NKX3-2	P78367	333 aa		13.85	□□□□□ -0.19
ABR-222	ENST00000573667	IRX5	P78411	483 aa	Predicted RBP	13.85	□□□□□ -0.19
ABR-222	ENST00000573667	PPP2R5B	Q15173	497 aa		13.85	□□□□□ -0.19
ABR-222	ENST00000573667	BRDT	Q58F21	947 aa	Predicted RBP	13.85	□□□□□ -0.19
ABR-222	ENST00000573667	SAMD3	Q8N6K7	520 aa		13.85	□□□□□ -0.19
ABR-222	ENST00000573667	SYTL5	Q8TDW5	730 aa	Predicted RBP	13.85	□□□□□ -0.19
ABR-222	ENST00000573667	SCFD2	Q8WU76	684 aa		13.85	□□□□□ -0.19
ABR-222	ENST00000573667	TBC1D5	Q92609	795 aa		13.85	□□□□□ -0.19
ABR-222	ENST00000573667	NEK1	Q96PY6	1258 aa		13.85	□□□□□ -0.19
ABR-222	ENST00000573667	TAAR1	Q96RJ0	339 aa		13.85	□□□□□ -0.19
ABR-222	ENST00000573667	PIGS	Q96S52	555 aa		13.85	□□□□□ -0.19
ABR-222	ENST00000573667	IWS1	Q96ST2	819 aa		13.85	□□□□□ -0.19
ABR-222	ENST00000573667	RMDN3	Q96TC7	470 aa		13.85	□□□□□ -0.19
ABR-222	ENST00000573667	MYL10	Q9BUA6	226 aa		13.85	□□□□□ -0.19
ABR-222	ENST00000573667	PDLIM7	Q9NR12	457 aa		13.85	□□□□□ -0.19
ABR-222	ENST00000573667	TRIOBP	Q9H2D6	2365 aa		13.85	□□□□□ -0.19
ABR-222	ENST00000573667	PNMA6F	A0A0J9YX94	578 aa		13.84	□□□□□ -0.19
ABR-222	ENST00000573667	RBM47	A0AV96	593 aa	Known RBP	13.84	□□□□□ -0.19
ABR-222	ENST00000573667	TLR3	O15455	904 aa	Known RBP	13.84	□□□□□ -0.19
ABR-222	ENST00000573667	RAG1	P15918	1043 aa		13.84	□□□□□ -0.19
ABR-222	ENST00000573667	LIFR	P42702	1097 aa		13.84	□□□□□ -0.19

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