RNA–Protein interactions for RNA: ENST00000573018.1

ERCC4-204, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-204ENST00000573018 ADAMTS1Q9UHI8 967 aa5.72□□□□□ -1.49
ERCC4-204ENST00000573018 ST6GALNAC2Q9UJ37 374 aa5.72□□□□□ -1.49
ERCC4-204ENST00000573018 RWDD3Q9Y3V2 267 aa5.72□□□□□ -1.49
ERCC4-204ENST00000573018 SPRED1Q7Z699 444 aa5.71□□□□□ -1.5
ERCC4-204ENST00000573018 PPFIBP1Q86W92 1011 aa5.71□□□□□ -1.5
ERCC4-204ENST00000573018 TTC9BQ8N6N2 239 aa5.71□□□□□ -1.5
ERCC4-204ENST00000573018 RGS22Q8NE09 1264 aa5.71□□□□□ -1.5
ERCC4-204ENST00000573018 DDX11Q96FC9 970 aa5.71□□□□□ -1.5
ERCC4-204ENST00000573018 TSPAN17Q96FV3 270 aa5.71□□□□□ -1.5
ERCC4-204ENST00000573018 C1QTNF3Q9BXJ4 246 aa5.71□□□□□ -1.5
ERCC4-204ENST00000573018 GP6Q9HCN6 339 aa5.71□□□□□ -1.5
ERCC4-204ENST00000573018 SMARCA5O60264 1052 aaPredicted RBP5.7□□□□□ -1.5
ERCC4-204ENST00000573018 TP53P04637 393 aaPredicted RBP5.7□□□□□ -1.5
ERCC4-204ENST00000573018 CACNB2Q08289 660 aaPredicted RBP5.7□□□□□ -1.5
ERCC4-204ENST00000573018 AXDND1Q5T1B0 1012 aaPredicted RBP5.7□□□□□ -1.5
ERCC4-204ENST00000573018 CABP7Q86V35 215 aa5.7□□□□□ -1.5
ERCC4-204ENST00000573018 ZFPM1Q8IX07 1006 aa5.7□□□□□ -1.5
ERCC4-204ENST00000573018 NLGN2Q8NFZ4 835 aa5.7□□□□□ -1.5
ERCC4-204ENST00000573018 SH3RF3Q8TEJ3 882 aaPredicted RBP5.7□□□□□ -1.5
ERCC4-204ENST00000573018 NKD1Q969G9 470 aa5.7□□□□□ -1.5
ERCC4-204ENST00000573018 ZDHHC15Q96MV8 337 aa5.7□□□□□ -1.5
ERCC4-204ENST00000573018 NOL6Q9H6R4 1146 aaKnown RBP5.7□□□□□ -1.5
ERCC4-204ENST00000573018 SLPIP03973 132 aa5.69□□□□□ -1.5
ERCC4-204ENST00000573018 TACR2P21452 398 aa5.69□□□□□ -1.5
ERCC4-204ENST00000573018 GDF5P43026 501 aa5.69□□□□□ -1.5
ERCC4-204ENST00000573018 PMS1P54277 932 aaKnown RBP5.69□□□□□ -1.5
ERCC4-204ENST00000573018 RGL3Q3MIN7 710 aa5.69□□□□□ -1.5
ERCC4-204ENST00000573018 DNAJC14Q6Y2X3 702 aaPredicted RBP5.69□□□□□ -1.5
ERCC4-204ENST00000573018 SND1Q7KZF4 910 aaKnown RBP eCLIP5.69□□□□□ -1.5
ERCC4-204ENST00000573018 SYT3Q9BQG1 590 aa5.69□□□□□ -1.5
ERCC4-204ENST00000573018 MRIQ9BWK5 157 aa5.69□□□□□ -1.5
ERCC4-204ENST00000573018 GGT7Q9UJ14 662 aa5.69□□□□□ -1.5
ERCC4-204ENST00000573018 INVSQ9Y283 1065 aa5.69□□□□□ -1.5
ERCC4-204ENST00000573018 ZNF451Q9Y4E5 1061 aa5.69□□□□□ -1.5
ERCC4-204ENST00000573018 FHOD1Q9Y613 1164 aa5.69□□□□□ -1.5
ERCC4-204ENST00000573018 ZNF536O15090 1300 aa5.69□□□□□ -1.5
ERCC4-204ENST00000573018 PPP2R5DQ14738 602 aa5.68□□□□□ -1.5
ERCC4-204ENST00000573018 LIMS2Q7Z4I7 341 aa5.68□□□□□ -1.5
ERCC4-204ENST00000573018 Q8N1X5 172 aa5.68□□□□□ -1.5
ERCC4-204ENST00000573018 LZTR1Q8N653 840 aa5.68□□□□□ -1.5
ERCC4-204ENST00000573018 CPA5Q8WXQ8 436 aa5.68□□□□□ -1.5
ERCC4-204ENST00000573018 DVL3Q92997 716 aaPredicted RBP5.68□□□□□ -1.5
ERCC4-204ENST00000573018 PEX11GQ96HA9 241 aa5.68□□□□□ -1.5
ERCC4-204ENST00000573018 NUDT5Q9UKK9 219 aa5.68□□□□□ -1.5
ERCC4-204ENST00000573018 SF3B6Q9Y3B4 125 aaKnown RBP5.68□□□□□ -1.5
ERCC4-204ENST00000573018 C8BP07358 591 aa5.67□□□□□ -1.5
ERCC4-204ENST00000573018 CD247P20963 164 aa5.67□□□□□ -1.5
ERCC4-204ENST00000573018 POU4F1Q01851 419 aa5.67□□□□□ -1.5
ERCC4-204ENST00000573018 KRTAP1-1Q07627 177 aa5.67□□□□□ -1.5
ERCC4-204ENST00000573018 SMARCC1Q92922 1105 aaPredicted RBP5.67□□□□□ -1.5
ERCC4-204ENST00000573018 GORASP1Q9BQQ3 440 aa5.67□□□□□ -1.5
ERCC4-204ENST00000573018 MENTQ9BUN1 341 aa5.67□□□□□ -1.5
ERCC4-204ENST00000573018 SIT1Q9Y3P8 196 aa5.67□□□□□ -1.5
ERCC4-204ENST00000573018 PPP1R11O60927 126 aaPredicted RBP5.66□□□□□ -1.5
ERCC4-204ENST00000573018 CYP2C8P10632 490 aa5.66□□□□□ -1.5
ERCC4-204ENST00000573018 ITGA4P13612 1032 aa5.66□□□□□ -1.5
ERCC4-204ENST00000573018 TRIM26Q12899 539 aaPredicted RBP5.66□□□□□ -1.5
ERCC4-204ENST00000573018 ANKRD39Q53RE8 183 aa5.66□□□□□ -1.5
ERCC4-204ENST00000573018 INTS3Q68E01 1043 aaKnown RBP5.66□□□□□ -1.5
ERCC4-204ENST00000573018 MCTP2Q6DN12 878 aa5.66□□□□□ -1.5
ERCC4-204ENST00000573018 GLB1LQ6UWU2 654 aa5.66□□□□□ -1.5
ERCC4-204ENST00000573018 STK32CQ86UX6 486 aa5.66□□□□□ -1.5
ERCC4-204ENST00000573018 SLITRK4Q8IW52 837 aa5.66□□□□□ -1.5
ERCC4-204ENST00000573018 LGI4Q8N135 537 aa5.66□□□□□ -1.5
ERCC4-204ENST00000573018 LINC00482Q8N8I6 264 aa5.66□□□□□ -1.5
ERCC4-204ENST00000573018 NETO2Q8NC67 525 aa5.66□□□□□ -1.5
ERCC4-204ENST00000573018 MCMBPQ9BTE3 642 aa5.66□□□□□ -1.5
ERCC4-204ENST00000573018 SSBP3Q9BWW4 388 aaPredicted RBP5.66□□□□□ -1.5
ERCC4-204ENST00000573018 GULP1Q9UBP9 304 aa5.66□□□□□ -1.5
ERCC4-204ENST00000573018 PATL2C9JE40 543 aaKnown RBP5.65□□□□□ -1.5
ERCC4-204ENST00000573018 STXBP3O00186 592 aa5.65□□□□□ -1.5
ERCC4-204ENST00000573018 KIAA2012Q0VF49 1180 aa5.65□□□□□ -1.5
ERCC4-204ENST00000573018 SLC9A5Q14940 896 aa5.65□□□□□ -1.5
ERCC4-204ENST00000573018 ZYXQ15942 572 aaKnown RBP5.65□□□□□ -1.5
ERCC4-204ENST00000573018 HS2ST1Q7LGA3 356 aa5.65□□□□□ -1.5
ERCC4-204ENST00000573018 CPNE8Q86YQ8 564 aa5.65□□□□□ -1.5
ERCC4-204ENST00000573018 USP33Q8TEY7 942 aa5.65□□□□□ -1.5
ERCC4-204ENST00000573018 KISS1RQ969F8 398 aaPredicted RBP5.65□□□□□ -1.5
ERCC4-204ENST00000573018 C11orf84Q9BUA3 381 aaPredicted RBP5.65□□□□□ -1.5
ERCC4-204ENST00000573018 MROH6A6NGR9 719 aa5.64□□□□□ -1.51
ERCC4-204ENST00000573018 RPL13P26373 211 aaKnown RBP5.64□□□□□ -1.51
ERCC4-204ENST00000573018 THBS2P35442 1172 aa5.64□□□□□ -1.51
ERCC4-204ENST00000573018 CDSNQ15517 529 aa5.64□□□□□ -1.51
ERCC4-204ENST00000573018 C9orf131Q5VYM1 1079 aa5.64□□□□□ -1.51
ERCC4-204ENST00000573018 BORAQ6PGQ7 559 aa5.64□□□□□ -1.51
ERCC4-204ENST00000573018 ADCY4Q8NFM4 1077 aa5.64□□□□□ -1.51
ERCC4-204ENST00000573018 MTA3Q9BTC8 594 aa5.64□□□□□ -1.51
ERCC4-204ENST00000573018 NT5C1AQ9BXI3 368 aa5.64□□□□□ -1.51
ERCC4-204ENST00000573018 ZNRF3Q9ULT6 936 aa5.64□□□□□ -1.51
ERCC4-204ENST00000573018 VAMP4O75379 141 aa5.63□□□□□ -1.51
ERCC4-204ENST00000573018 ZBTB7AO95365 584 aa5.63□□□□□ -1.51
ERCC4-204ENST00000573018 NTRK1P04629 796 aa5.63□□□□□ -1.51
ERCC4-204ENST00000573018 ACVRL1P37023 503 aa5.63□□□□□ -1.51
ERCC4-204ENST00000573018 ICAM4Q14773 271 aa5.63□□□□□ -1.51
ERCC4-204ENST00000573018 DPY19L1Q2PZI1 675 aa5.63□□□□□ -1.51
ERCC4-204ENST00000573018 EEF1DP3Q658K8 133 aa5.63□□□□□ -1.51
ERCC4-204ENST00000573018 WWC2Q6AWC2 1192 aa5.63□□□□□ -1.51
ERCC4-204ENST00000573018 RCSD1Q6JBY9 416 aa5.63□□□□□ -1.51
ERCC4-204ENST00000573018 CRIP3Q6Q6R5 217 aa5.63□□□□□ -1.51
ERCC4-204ENST00000573018 UNC5AQ6ZN44 842 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms