RNA–Protein interactions for RNA: ENST00000572438.1

CHRNE-202, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

TSL 5

Gene CHRNE, Length 1,847 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-202ENST00000572438 ZNF280CQ8ND82 737 aa23.26■■□□□ 1.31
CHRNE-202ENST00000572438 PDLIM2Q96JY6 352 aa23.26■■□□□ 1.31
CHRNE-202ENST00000572438 VCAM1P19320 739 aa23.26■■□□□ 1.31
CHRNE-202ENST00000572438 USP11P51784 963 aa23.26■■□□□ 1.31
CHRNE-202ENST00000572438 DPCR1Q3MIW9 517 aa23.26■■□□□ 1.31
CHRNE-202ENST00000572438 SAMD1Q6SPF0 538 aaPredicted RBP23.26■■□□□ 1.31
CHRNE-202ENST00000572438 SH3RF1Q7Z6J0 888 aa23.26■■□□□ 1.31
CHRNE-202ENST00000572438 CCSER1Q9C0I3 900 aa23.26■■□□□ 1.31
CHRNE-202ENST00000572438 ZC3H4Q9UPT8 1303 aaKnown RBP23.25■■□□□ 1.31
CHRNE-202ENST00000572438 SPDYE3A6NKU9 549 aa23.25■■□□□ 1.31
CHRNE-202ENST00000572438 UBA7P41226 1012 aa23.25■■□□□ 1.31
CHRNE-202ENST00000572438 DGKZQ13574 1117 aa23.25■■□□□ 1.31
CHRNE-202ENST00000572438 IQCB1Q15051 598 aa23.25■■□□□ 1.31
CHRNE-202ENST00000572438 NT5DC1Q5TFE4 455 aa23.25■■□□□ 1.31
CHRNE-202ENST00000572438 GRAMD1CQ8IYS0 662 aa23.25■■□□□ 1.31
CHRNE-202ENST00000572438 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.25■■□□□ 1.31
CHRNE-202ENST00000572438 PAGE5Q96GU1 130 aa23.25■■□□□ 1.31
CHRNE-202ENST00000572438 P2RX7Q99572 595 aaKnown RBP23.25■■□□□ 1.31
CHRNE-202ENST00000572438 TANGO6Q9C0B7 1094 aa23.25■■□□□ 1.31
CHRNE-202ENST00000572438 DDX25Q9UHL0 483 aaKnown RBP23.25■■□□□ 1.31
CHRNE-202ENST00000572438 MRPL11Q9Y3B7 192 aaKnown RBP23.25■■□□□ 1.31
CHRNE-202ENST00000572438 ABCB11O95342 1321 aa23.25■■□□□ 1.31
CHRNE-202ENST00000572438 PRR29P0C7W0 189 aa23.24■■□□□ 1.31
CHRNE-202ENST00000572438 CDC25AP30304 524 aa23.24■■□□□ 1.31
CHRNE-202ENST00000572438 USP50Q70EL3 339 aaPredicted RBP23.24■■□□□ 1.31
CHRNE-202ENST00000572438 CRYGNQ8WXF5 182 aa23.24■■□□□ 1.31
CHRNE-202ENST00000572438 ZHX2Q9Y6X8 837 aa23.24■■□□□ 1.31
CHRNE-202ENST00000572438 PP2D1A8MPX8 630 aa23.24■■□□□ 1.31
CHRNE-202ENST00000572438 ADM5C9JUS6 153 aa23.24■■□□□ 1.31
CHRNE-202ENST00000572438 USP2O75604 605 aaPredicted RBP23.24■■□□□ 1.31
CHRNE-202ENST00000572438 ICAM1P05362 532 aa23.24■■□□□ 1.31
CHRNE-202ENST00000572438 TXKP42681 527 aa23.24■■□□□ 1.31
CHRNE-202ENST00000572438 MOXD1Q6UVY6 613 aa23.24■■□□□ 1.31
CHRNE-202ENST00000572438 LDHDQ86WU2 507 aa23.24■■□□□ 1.31
CHRNE-202ENST00000572438 SMARCE1Q969G3 411 aa23.24■■□□□ 1.31
CHRNE-202ENST00000572438 DISC1Q9NRI5 854 aa23.24■■□□□ 1.31
CHRNE-202ENST00000572438 CYP3A7-CYP3A51PA0A087WV96 503 aa23.23■■□□□ 1.31
CHRNE-202ENST00000572438 CYP3A7P24462 503 aa23.23■■□□□ 1.31
CHRNE-202ENST00000572438 TECP42680 631 aa23.23■■□□□ 1.31
CHRNE-202ENST00000572438 SARSP49591 514 aaKnown RBP23.23■■□□□ 1.31
CHRNE-202ENST00000572438 FXR2P51116 673 aaKnown RBP eCLIP23.23■■□□□ 1.31
CHRNE-202ENST00000572438 ARHGAP4P98171 946 aa23.23■■□□□ 1.31
CHRNE-202ENST00000572438 KARSQ15046 597 aaKnown RBP23.23■■□□□ 1.31
CHRNE-202ENST00000572438 PDXDC2PQ6P474 469 aa23.23■■□□□ 1.31
CHRNE-202ENST00000572438 IGSF22Q8N9C0 903 aa23.23■■□□□ 1.31
CHRNE-202ENST00000572438 BPIFA3Q9BQP9 254 aa23.23■■□□□ 1.31
CHRNE-202ENST00000572438 RPAP3Q9H6T3 665 aaPredicted RBP23.23■■□□□ 1.31
CHRNE-202ENST00000572438 C19orf81C9J6K1 198 aa23.22■■□□□ 1.31
CHRNE-202ENST00000572438 GRIN3BO60391 1043 aa23.22■■□□□ 1.31
CHRNE-202ENST00000572438 HOXA13P31271 388 aaPredicted RBP23.22■■□□□ 1.31
CHRNE-202ENST00000572438 SREBF1P36956 1147 aa23.22■■□□□ 1.31
CHRNE-202ENST00000572438 PRKG1Q13976 671 aa23.22■■□□□ 1.31
CHRNE-202ENST00000572438 TMEM266Q2M3C6 531 aa23.22■■□□□ 1.31
CHRNE-202ENST00000572438 SPATA20Q8TB22 786 aa23.22■■□□□ 1.31
CHRNE-202ENST00000572438 C12orf42Q96LP6 360 aa23.22■■□□□ 1.31
CHRNE-202ENST00000572438 MBOAT7Q96N66 472 aa23.22■■□□□ 1.31
CHRNE-202ENST00000572438 CCDC39Q9UFE4 941 aa23.22■■□□□ 1.31
CHRNE-202ENST00000572438 PPP1R9AQ9ULJ8 1098 aa23.22■■□□□ 1.31
CHRNE-202ENST00000572438 ZNF536O15090 1300 aa23.22■■□□□ 1.31
CHRNE-202ENST00000572438 GCOM1H8Y6P7 765 aaPredicted RBP23.22■■□□□ 1.31
CHRNE-202ENST00000572438 FLOT1O75955 427 aa23.22■■□□□ 1.31
CHRNE-202ENST00000572438 SMC2O95347 1197 aa23.22■■□□□ 1.31
CHRNE-202ENST00000572438 POLR2MP0CAP2 368 aa23.22■■□□□ 1.31
CHRNE-202ENST00000572438 EPHX2P34913 555 aa23.22■■□□□ 1.31
CHRNE-202ENST00000572438 STAT6P42226 847 aa23.22■■□□□ 1.31
CHRNE-202ENST00000572438 AFMP43652 599 aa23.22■■□□□ 1.31
CHRNE-202ENST00000572438 DLK2Q6UY11 383 aa23.22■■□□□ 1.31
CHRNE-202ENST00000572438 KRT26Q7Z3Y9 468 aa23.22■■□□□ 1.31
CHRNE-202ENST00000572438 RASSF8Q8NHQ8 419 aa23.22■■□□□ 1.31
CHRNE-202ENST00000572438 ZC3H15Q8WU90 426 aaKnown RBP23.22■■□□□ 1.31
CHRNE-202ENST00000572438 GLTPD2A6NH11 291 aa23.21■■□□□ 1.31
CHRNE-202ENST00000572438 CFBP00751 764 aa23.21■■□□□ 1.31
CHRNE-202ENST00000572438 ISM2Q6H9L7 571 aa23.21■■□□□ 1.31
CHRNE-202ENST00000572438 CABP7Q86V35 215 aa23.21■■□□□ 1.31
CHRNE-202ENST00000572438 DHX40Q8IX18 779 aaKnown RBP23.21■■□□□ 1.31
CHRNE-202ENST00000572438 RAB34Q9BZG1 259 aa23.21■■□□□ 1.31
CHRNE-202ENST00000572438 SLC38A10Q9HBR0 1119 aa23.21■■□□□ 1.31
CHRNE-202ENST00000572438 MAN1B1Q9UKM7 699 aa23.21■■□□□ 1.31
CHRNE-202ENST00000572438 CCPG1Q9ULG6 757 aa23.21■■□□□ 1.31
CHRNE-202ENST00000572438 BECN2A8MW95 431 aa23.2■■□□□ 1.3
CHRNE-202ENST00000572438 GOLGA6L19H0YKK7 550 aa23.2■■□□□ 1.3
CHRNE-202ENST00000572438 MAP3K9P80192 1104 aa23.2■■□□□ 1.3
CHRNE-202ENST00000572438 PDIA5Q14554 519 aa23.2■■□□□ 1.3
CHRNE-202ENST00000572438 RRAGBQ5VZM2 374 aa23.2■■□□□ 1.3
CHRNE-202ENST00000572438 TRIML1Q8N9V2 468 aa23.2■■□□□ 1.3
CHRNE-202ENST00000572438 HAS1Q92839 578 aa23.2■■□□□ 1.3
CHRNE-202ENST00000572438 AGBL1Q96MI9 1066 aa23.2■■□□□ 1.3
CHRNE-202ENST00000572438 ADCY5O95622 1261 aa23.19■■□□□ 1.3
CHRNE-202ENST00000572438 HMGCS2P54868 508 aa23.19■■□□□ 1.3
CHRNE-202ENST00000572438 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.19■■□□□ 1.3
CHRNE-202ENST00000572438 LRWD1Q9UFC0 647 aa23.19■■□□□ 1.3
CHRNE-202ENST00000572438 MYH7BA7E2Y1 1941 aa23.19■■□□□ 1.3
CHRNE-202ENST00000572438 POLR2AP24928 1970 aaKnown RBP23.19■■□□□ 1.3
CHRNE-202ENST00000572438 AP5Z1O43299 807 aa23.19■■□□□ 1.3
CHRNE-202ENST00000572438 PPP1R12BO60237 982 aaPredicted RBP23.19■■□□□ 1.3
CHRNE-202ENST00000572438 FDX1P10109 184 aa23.19■■□□□ 1.3
CHRNE-202ENST00000572438 PLCB2Q00722 1185 aa23.19■■□□□ 1.3
CHRNE-202ENST00000572438 DPYDQ12882 1025 aa23.19■■□□□ 1.3
CHRNE-202ENST00000572438 NAALADL2Q58DX5 795 aa23.19■■□□□ 1.3
CHRNE-202ENST00000572438 FCHSD1Q86WN1 690 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms