RNA–Protein interactions for RNA: ENST00000571995.5

RAB40B-206, Transcript of RAB40B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40B, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-206ENST00000571995 OR8K1Q8NGG5 319 aa18.06■□□□□ 0.48
RAB40B-206ENST00000571995 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.06■□□□□ 0.488e-8■■■■■ 28.7
RAB40B-206ENST00000571995 BARHL2Q9NY43 387 aa18.06■□□□□ 0.48
RAB40B-206ENST00000571995 EPN1Q9Y6I3 576 aaPredicted RBP18.06■□□□□ 0.48
RAB40B-206ENST00000571995 GOLGA6L9A6NEM1 432 aa18.05■□□□□ 0.48
RAB40B-206ENST00000571995 KIF5AQ12840 1032 aa18.05■□□□□ 0.48
RAB40B-206ENST00000571995 NYAP1Q6ZVC0 841 aa18.05■□□□□ 0.48
RAB40B-206ENST00000571995 FBXL16Q8N461 479 aa18.05■□□□□ 0.48
RAB40B-206ENST00000571995 AGPAT5Q9NUQ2 364 aa18.05■□□□□ 0.48
RAB40B-206ENST00000571995 EEF2P13639 858 aaKnown RBP18.05■□□□□ 0.48
RAB40B-206ENST00000571995 CRKP46108 304 aa18.05■□□□□ 0.48
RAB40B-206ENST00000571995 GRM4Q14833 912 aa18.05■□□□□ 0.48
RAB40B-206ENST00000571995 BPIFA3Q9BQP9 254 aa18.05■□□□□ 0.48
RAB40B-206ENST00000571995 ZNF277Q9NRM2 450 aaPredicted RBP18.05■□□□□ 0.48
RAB40B-206ENST00000571995 PPP1R3GB7ZBB8 358 aa18.05■□□□□ 0.48
RAB40B-206ENST00000571995 MFAP3LO75121 409 aa18.05■□□□□ 0.48
RAB40B-206ENST00000571995 ALDH1B1P30837 517 aa18.05■□□□□ 0.48
RAB40B-206ENST00000571995 PRAMEF18Q5VWM3 479 aa18.05■□□□□ 0.48
RAB40B-206ENST00000571995 PIGOQ8TEQ8 1089 aa18.05■□□□□ 0.48
RAB40B-206ENST00000571995 JAKMIP2Q96AA8 810 aa18.05■□□□□ 0.48
RAB40B-206ENST00000571995 CLIC2O15247 247 aa18.04■□□□□ 0.48
RAB40B-206ENST00000571995 DDR1Q08345 913 aa18.04■□□□□ 0.48
RAB40B-206ENST00000571995 ABCB5Q2M3G0 1257 aa18.04■□□□□ 0.48
RAB40B-206ENST00000571995 ZNF579Q8NAF0 562 aaKnown RBP18.04■□□□□ 0.48
RAB40B-206ENST00000571995 CEP89Q96ST8 783 aa18.04■□□□□ 0.48
RAB40B-206ENST00000571995 DLGAP5Q15398 846 aa18.04■□□□□ 0.48
RAB40B-206ENST00000571995 ADGRF4Q8IZF3 695 aa18.04■□□□□ 0.48
RAB40B-206ENST00000571995 NAPGQ99747 312 aaPredicted RBP18.04■□□□□ 0.48
RAB40B-206ENST00000571995 STXBP3O00186 592 aa18.04■□□□□ 0.48
RAB40B-206ENST00000571995 CYLC1P35663 651 aaPredicted RBP18.04■□□□□ 0.48
RAB40B-206ENST00000571995 RUFY1Q96T51 708 aa18.04■□□□□ 0.48
RAB40B-206ENST00000571995 VPS18Q9P253 973 aa18.04■□□□□ 0.48
RAB40B-206ENST00000571995 ANAPC4Q9UJX5 808 aa18.04■□□□□ 0.48
RAB40B-206ENST00000571995 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.04■□□□□ 0.48
RAB40B-206ENST00000571995 TMEM132AQ24JP5 1023 aa18.03■□□□□ 0.48
RAB40B-206ENST00000571995 NEK11Q8NG66 645 aa18.03■□□□□ 0.48
RAB40B-206ENST00000571995 PYM1Q9BRP8 204 aaKnown RBP18.03■□□□□ 0.48
RAB40B-206ENST00000571995 DDX4Q9NQI0 724 aaKnown RBP18.03■□□□□ 0.48
RAB40B-206ENST00000571995 GYPCP04921 128 aa18.03■□□□□ 0.48
RAB40B-206ENST00000571995 TICAM2Q86XR7 235 aa18.03■□□□□ 0.48
RAB40B-206ENST00000571995 SUGCTQ9HAC7 445 aa18.03■□□□□ 0.48
RAB40B-206ENST00000571995 MARF1Q9Y4F3 1742 aaKnown RBP18.03■□□□□ 0.48
RAB40B-206ENST00000571995 POTEB3A0JP26 581 aa18.03■□□□□ 0.48
RAB40B-206ENST00000571995 POTECB2RU33 542 aa18.03■□□□□ 0.48
RAB40B-206ENST00000571995 SLC37A4O43826 429 aa18.03■□□□□ 0.48
RAB40B-206ENST00000571995 ANKRD40Q6AI12 368 aa18.03■□□□□ 0.48
RAB40B-206ENST00000571995 POTEBQ6S5H4 581 aa18.03■□□□□ 0.48
RAB40B-206ENST00000571995 TMTC1Q8IUR5 882 aa18.03■□□□□ 0.48
RAB40B-206ENST00000571995 LARP4BQ92615 738 aaKnown RBP18.03■□□□□ 0.48
RAB40B-206ENST00000571995 HSD3B7Q9H2F3 369 aa18.03■□□□□ 0.48
RAB40B-206ENST00000571995 GCNT3O95395 438 aa18.02■□□□□ 0.48
RAB40B-206ENST00000571995 PDE6BP35913 854 aa18.02■□□□□ 0.48
RAB40B-206ENST00000571995 SF3A3Q12874 501 aaKnown RBP eCLIP18.02■□□□□ 0.48
RAB40B-206ENST00000571995 DNAAF5Q86Y56 855 aa18.02■□□□□ 0.48
RAB40B-206ENST00000571995 GSPT2Q8IYD1 628 aaKnown RBP18.02■□□□□ 0.48
RAB40B-206ENST00000571995 MED15Q96RN5 788 aa18.02■□□□□ 0.48
RAB40B-206ENST00000571995 ADD3Q9UEY8 706 aaKnown RBP18.02■□□□□ 0.48
RAB40B-206ENST00000571995 ADGRG1Q9Y653 693 aa18.02■□□□□ 0.48
RAB40B-206ENST00000571995 MDM2Q00987 491 aaPredicted RBP18.02■□□□□ 0.48
RAB40B-206ENST00000571995 FUT2Q10981 343 aa18.02■□□□□ 0.48
RAB40B-206ENST00000571995 CNNM4Q6P4Q7 775 aa18.02■□□□□ 0.48
RAB40B-206ENST00000571995 PARD6BQ9BYG5 372 aa18.02■□□□□ 0.48
RAB40B-206ENST00000571995 USO1O60763 962 aaKnown RBP18.02■□□□□ 0.47
RAB40B-206ENST00000571995 ERLIN1O75477 346 aa18.02■□□□□ 0.47
RAB40B-206ENST00000571995 NR1I3Q14994 352 aa18.02■□□□□ 0.47
RAB40B-206ENST00000571995 REXO1L1PQ8IX06 675 aa18.02■□□□□ 0.47
RAB40B-206ENST00000571995 P2RX5Q93086 422 aa18.02■□□□□ 0.47
RAB40B-206ENST00000571995 RTFDC1Q9BY42 306 aaPredicted RBP18.02■□□□□ 0.47
RAB40B-206ENST00000571995 BICDL2A1A5D9 508 aa18.01■□□□□ 0.47
RAB40B-206ENST00000571995 ZBTB7AO95365 584 aa18.01■□□□□ 0.47
RAB40B-206ENST00000571995 CDC42EP5Q6NZY7 148 aa18.01■□□□□ 0.47
RAB40B-206ENST00000571995 TMC4Q7Z404 712 aa18.01■□□□□ 0.47
RAB40B-206ENST00000571995 COL23A1Q86Y22 540 aaPredicted RBP18.01■□□□□ 0.47
RAB40B-206ENST00000571995 GLIS3Q8NEA6 775 aa18.01■□□□□ 0.47
RAB40B-206ENST00000571995 NUDT12Q9BQG2 462 aa18.01■□□□□ 0.47
RAB40B-206ENST00000571995 SCN11AQ9UI33 1791 aa18.01■□□□□ 0.47
RAB40B-206ENST00000571995 POTEFA5A3E0 1075 aa18.01■□□□□ 0.47
RAB40B-206ENST00000571995 H7C1D1 291 aa18.01■□□□□ 0.47
RAB40B-206ENST00000571995 RNF225M0QZC1 329 aaPredicted RBP18.01■□□□□ 0.47
RAB40B-206ENST00000571995 KRT86O43790 486 aa18.01■□□□□ 0.47
RAB40B-206ENST00000571995 POTEIP0CG38 1075 aa18.01■□□□□ 0.47
RAB40B-206ENST00000571995 PCP11498 1178 aaKnown RBP18.01■□□□□ 0.47
RAB40B-206ENST00000571995 SSR1P43307 286 aaKnown RBP18.01■□□□□ 0.47
RAB40B-206ENST00000571995 TRAPPC10P48553 1259 aa18.01■□□□□ 0.47
RAB40B-206ENST00000571995 POTEGQ6S5H5 508 aa18.01■□□□□ 0.47
RAB40B-206ENST00000571995 POTEEQ6S8J3 1075 aa18.01■□□□□ 0.47
RAB40B-206ENST00000571995 FAM114A1Q8IWE2 563 aa18.01■□□□□ 0.47
RAB40B-206ENST00000571995 DDX12PQ92771 950 aa18.01■□□□□ 0.47
RAB40B-206ENST00000571995 SMARCAL1Q9NZC9 954 aa18.01■□□□□ 0.47
RAB40B-206ENST00000571995 TMEM110-MUSTN1A8MSY1 372 aa18.01■□□□□ 0.47
RAB40B-206ENST00000571995 ALAS1P13196 640 aa18.01■□□□□ 0.47
RAB40B-206ENST00000571995 CDC37Q16543 378 aaPredicted RBP18.01■□□□□ 0.47
RAB40B-206ENST00000571995 RWDD2AQ9UIY3 292 aa18.01■□□□□ 0.47
RAB40B-206ENST00000571995 DUSP10Q9Y6W6 482 aa18.01■□□□□ 0.47
RAB40B-206ENST00000571995 ARFGEF2Q9Y6D5 1785 aa18.01■□□□□ 0.47
RAB40B-206ENST00000571995 FAM13AO94988 1023 aa18■□□□□ 0.47
RAB40B-206ENST00000571995 CYP2J2P51589 502 aa18■□□□□ 0.47
RAB40B-206ENST00000571995 APBA1Q02410 837 aa18■□□□□ 0.47
RAB40B-206ENST00000571995 HLTFQ14527 1009 aaKnown RBP eCLIP18■□□□□ 0.47
RAB40B-206ENST00000571995 SLC10A5Q5PT55 438 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms