RNA–Protein interactions for RNA: ENST00000571739.5

TRAPPC1-203, Transcript of trafficking protein particle complex 1, humanhuman

TSL 3

Gene TRAPPC1, Length 648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-203ENST00000571739 PFASO15067 1338 aa10.07□□□□□ -0.8
TRAPPC1-203ENST00000571739 PLXNA1Q9UIW2 1896 aa10.07□□□□□ -0.8
TRAPPC1-203ENST00000571739 GOLGA8AA7E2F4 631 aa10.07□□□□□ -0.8
TRAPPC1-203ENST00000571739 GOLGA8BA8MQT2 603 aa10.07□□□□□ -0.8
TRAPPC1-203ENST00000571739 EIF5BO60841 1220 aaKnown RBP10.07□□□□□ -0.8
TRAPPC1-203ENST00000571739 CALML3P27482 149 aa10.07□□□□□ -0.8
TRAPPC1-203ENST00000571739 MNX1P50219 401 aaPredicted RBP10.07□□□□□ -0.8
TRAPPC1-203ENST00000571739 CCT2P78371 535 aaKnown RBP10.07□□□□□ -0.8
TRAPPC1-203ENST00000571739 GHRHRQ02643 423 aa10.07□□□□□ -0.8
TRAPPC1-203ENST00000571739 PPP2R5BQ15173 497 aa10.07□□□□□ -0.8
TRAPPC1-203ENST00000571739 ARMCX2Q7L311 632 aa10.07□□□□□ -0.8
TRAPPC1-203ENST00000571739 SYTL5Q8TDW5 730 aaPredicted RBP10.07□□□□□ -0.8
TRAPPC1-203ENST00000571739 MORC4Q8TE76 937 aa10.07□□□□□ -0.8
TRAPPC1-203ENST00000571739 RRP36Q96EU6 259 aaKnown RBP10.07□□□□□ -0.8
TRAPPC1-203ENST00000571739 ZNF274Q96GC6 653 aaPredicted RBP10.07□□□□□ -0.8
TRAPPC1-203ENST00000571739 MAF1Q9H063 256 aa10.07□□□□□ -0.8
TRAPPC1-203ENST00000571739 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.07□□□□□ -0.8
TRAPPC1-203ENST00000571739 OGDHLQ9ULD0 1010 aa10.07□□□□□ -0.8
TRAPPC1-203ENST00000571739 NAP1L2Q9ULW6 460 aaPredicted RBP10.07□□□□□ -0.8
TRAPPC1-203ENST00000571739 SYNGAP1Q96PV0 1343 aa10.07□□□□□ -0.8
TRAPPC1-203ENST00000571739 CENPFP49454 3210 aa10.06□□□□□ -0.8
TRAPPC1-203ENST00000571739 SEPT4O43236 478 aa10.06□□□□□ -0.8
TRAPPC1-203ENST00000571739 CFBP00751 764 aa10.06□□□□□ -0.8
TRAPPC1-203ENST00000571739 TFRCP02786 760 aaKnown RBP10.06□□□□□ -0.8
TRAPPC1-203ENST00000571739 CNGA1P29973 690 aa10.06□□□□□ -0.8
TRAPPC1-203ENST00000571739 METAP2P50579 478 aaKnown RBP eCLIP10.06□□□□□ -0.8
TRAPPC1-203ENST00000571739 ALDH5A1P51649 535 aaPredicted RBP10.06□□□□□ -0.8
TRAPPC1-203ENST00000571739 HSD17B4P51659 736 aa10.06□□□□□ -0.8
TRAPPC1-203ENST00000571739 AK2P54819 239 aa10.06□□□□□ -0.8
TRAPPC1-203ENST00000571739 ACVR2BQ13705 512 aa10.06□□□□□ -0.8
TRAPPC1-203ENST00000571739 TMEM63BQ5T3F8 832 aa10.06□□□□□ -0.8
TRAPPC1-203ENST00000571739 ANO1Q5XXA6 986 aa10.06□□□□□ -0.8
TRAPPC1-203ENST00000571739 TYW1BQ6NUM6 668 aa10.06□□□□□ -0.8
TRAPPC1-203ENST00000571739 UBE2Q1Q7Z7E8 422 aa10.06□□□□□ -0.8
TRAPPC1-203ENST00000571739 MCF2L2Q86YR7 1114 aa10.06□□□□□ -0.8
TRAPPC1-203ENST00000571739 C22orf23Q9BZE7 217 aa10.06□□□□□ -0.8
TRAPPC1-203ENST00000571739 ABHD16BQ9H3Z7 469 aa10.06□□□□□ -0.8
TRAPPC1-203ENST00000571739 NCOA5Q9HCD5 579 aaKnown RBP10.06□□□□□ -0.8
TRAPPC1-203ENST00000571739 PDGFCQ9NRA1 345 aa10.06□□□□□ -0.8
TRAPPC1-203ENST00000571739 DDX20Q9UHI6 824 aaKnown RBP10.06□□□□□ -0.8
TRAPPC1-203ENST00000571739 NRBP1Q9UHY1 535 aa10.06□□□□□ -0.8
TRAPPC1-203ENST00000571739 TPCN1Q9ULQ1 816 aa10.06□□□□□ -0.8
TRAPPC1-203ENST00000571739 CNTNAP5Q8WYK1 1306 aa10.06□□□□□ -0.8
TRAPPC1-203ENST00000571739 LCTP09848 1927 aa10.05□□□□□ -0.8
TRAPPC1-203ENST00000571739 MYH6P13533 1939 aa10.05□□□□□ -0.8
TRAPPC1-203ENST00000571739 ASB14A6NK59 587 aa10.05□□□□□ -0.8
TRAPPC1-203ENST00000571739 MEIS2O14770 477 aa10.05□□□□□ -0.8
TRAPPC1-203ENST00000571739 ADCY6O43306 1168 aa10.05□□□□□ -0.8
TRAPPC1-203ENST00000571739 PPFIA3O75145 1194 aa10.05□□□□□ -0.8
TRAPPC1-203ENST00000571739 EDNRBP24530 442 aa10.05□□□□□ -0.8
TRAPPC1-203ENST00000571739 HOXA13P31271 388 aaPredicted RBP10.05□□□□□ -0.8
TRAPPC1-203ENST00000571739 RBM25P49756 843 aaKnown RBP10.05□□□□□ -0.8
TRAPPC1-203ENST00000571739 NEK4P51957 841 aa10.05□□□□□ -0.8
TRAPPC1-203ENST00000571739 IRX5P78411 483 aaPredicted RBP10.05□□□□□ -0.8
TRAPPC1-203ENST00000571739 PKN1Q16512 942 aa10.05□□□□□ -0.8
TRAPPC1-203ENST00000571739 TAPT1Q6NXT6 567 aa10.05□□□□□ -0.8
TRAPPC1-203ENST00000571739 EEPD1Q7L9B9 569 aa10.05□□□□□ -0.8
TRAPPC1-203ENST00000571739 DNERQ8NFT8 737 aa10.05□□□□□ -0.8
TRAPPC1-203ENST00000571739 MAP3K20Q9NYL2 800 aaKnown RBP10.05□□□□□ -0.8
TRAPPC1-203ENST00000571739 CNPY2Q9Y2B0 182 aa10.05□□□□□ -0.8
TRAPPC1-203ENST00000571739 MCM3APO60318 1980 aa10.05□□□□□ -0.8
TRAPPC1-203ENST00000571739 NID2Q14112 1375 aa10.04□□□□□ -0.8
TRAPPC1-203ENST00000571739 CCDC196A0A1B0GTZ2 297 aa10.04□□□□□ -0.8
TRAPPC1-203ENST00000571739 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.04□□□□□ -0.8
TRAPPC1-203ENST00000571739 GCOM1H8Y6P7 765 aaPredicted RBP10.04□□□□□ -0.8
TRAPPC1-203ENST00000571739 PRPF3O43395 683 aaKnown RBP10.04□□□□□ -0.8
TRAPPC1-203ENST00000571739 DTNBO60941 627 aa10.04□□□□□ -0.8
TRAPPC1-203ENST00000571739 POLR2MP0CAP2 368 aa10.04□□□□□ -0.8
TRAPPC1-203ENST00000571739 PTGS1P23219 599 aa10.04□□□□□ -0.8
TRAPPC1-203ENST00000571739 SCRN1Q12765 414 aa10.04□□□□□ -0.8
TRAPPC1-203ENST00000571739 TRAF1Q13077 416 aa10.04□□□□□ -0.8
TRAPPC1-203ENST00000571739 STK3Q13188 491 aa10.04□□□□□ -0.8
TRAPPC1-203ENST00000571739 CCDC144BQ3MJ40 725 aa10.04□□□□□ -0.8
TRAPPC1-203ENST00000571739 WWC2Q6AWC2 1192 aa10.04□□□□□ -0.8
TRAPPC1-203ENST00000571739 USP17L6PQ6QN14 398 aa10.04□□□□□ -0.8
TRAPPC1-203ENST00000571739 SAMD3Q8N6K7 520 aa10.04□□□□□ -0.8
TRAPPC1-203ENST00000571739 GPKOWQ92917 476 aaPredicted RBP eCLIP10.04□□□□□ -0.8
TRAPPC1-203ENST00000571739 PHKBQ93100 1093 aa10.04□□□□□ -0.8
TRAPPC1-203ENST00000571739 ADD3Q9UEY8 706 aaKnown RBP10.04□□□□□ -0.8
TRAPPC1-203ENST00000571739 SEC63Q9UGP8 760 aaKnown RBP10.04□□□□□ -0.8
TRAPPC1-203ENST00000571739 ZHX1Q9UKY1 873 aaPredicted RBP10.04□□□□□ -0.8
TRAPPC1-203ENST00000571739 FAM184BQ9ULE4 1060 aa10.04□□□□□ -0.8
TRAPPC1-203ENST00000571739 LOC102724159A0A0B4J2E5 919 aa10.03□□□□□ -0.8
TRAPPC1-203ENST00000571739 ADAMTS3O15072 1205 aa10.03□□□□□ -0.8
TRAPPC1-203ENST00000571739 MSCO60682 206 aa10.03□□□□□ -0.8
TRAPPC1-203ENST00000571739 LARGE1O95461 756 aa10.03□□□□□ -0.8
TRAPPC1-203ENST00000571739 IFNAR1P17181 557 aa10.03□□□□□ -0.8
TRAPPC1-203ENST00000571739 CAPN2P17655 700 aa10.03□□□□□ -0.8
TRAPPC1-203ENST00000571739 ADCYAP1R1P41586 468 aa10.03□□□□□ -0.8
TRAPPC1-203ENST00000571739 PWP2Q15269 919 aaKnown RBP10.03□□□□□ -0.8
TRAPPC1-203ENST00000571739 ME3Q16798 604 aa10.03□□□□□ -0.8
TRAPPC1-203ENST00000571739 PFKFB3Q16875 520 aaPredicted RBP10.03□□□□□ -0.8
TRAPPC1-203ENST00000571739 FCHSD1Q86WN1 690 aa10.03□□□□□ -0.8
TRAPPC1-203ENST00000571739 FBXO16Q8IX29 292 aaPredicted RBP10.03□□□□□ -0.8
TRAPPC1-203ENST00000571739 NSUN6Q8TEA1 469 aaKnown RBP10.03□□□□□ -0.8
TRAPPC1-203ENST00000571739 DIS3LQ8TF46 1054 aaKnown RBP10.03□□□□□ -0.8
TRAPPC1-203ENST00000571739 LENG1Q96BZ8 264 aaPredicted RBP10.03□□□□□ -0.8
TRAPPC1-203ENST00000571739 PAWRQ96IZ0 340 aaKnown RBP10.03□□□□□ -0.8
TRAPPC1-203ENST00000571739 ZFP91Q96JP5 570 aaPredicted RBP10.03□□□□□ -0.8
TRAPPC1-203ENST00000571739 RMDN3Q96TC7 470 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms