RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 ZNF865P0CJ78 1059 aaPredicted RBP8.1□□□□□ -1.11
SMG6-209ENST00000571442 CALM1P0DP23 149 aa8.1□□□□□ -1.11
SMG6-209ENST00000571442 CALM2P0DP24 149 aa8.1□□□□□ -1.11
SMG6-209ENST00000571442 CALM3P0DP25 149 aa8.1□□□□□ -1.11
SMG6-209ENST00000571442 CALML3P27482 149 aa8.1□□□□□ -1.11
SMG6-209ENST00000571442 SMARCA1P28370 1054 aa8.1□□□□□ -1.11
SMG6-209ENST00000571442 KIF5BP33176 963 aa8.1□□□□□ -1.11
SMG6-209ENST00000571442 RBM25P49756 843 aaKnown RBP8.1□□□□□ -1.11
SMG6-209ENST00000571442 METAP2P50579 478 aaKnown RBP eCLIP8.1□□□□□ -1.11
SMG6-209ENST00000571442 FGD1P98174 961 aa8.1□□□□□ -1.11
SMG6-209ENST00000571442 SCRN1Q12765 414 aa8.1□□□□□ -1.11
SMG6-209ENST00000571442 STK3Q13188 491 aa8.1□□□□□ -1.11
SMG6-209ENST00000571442 PKN1Q16512 942 aa8.1□□□□□ -1.11
SMG6-209ENST00000571442 LHX8Q68G74 356 aa8.1□□□□□ -1.11
SMG6-209ENST00000571442 WWC2Q6AWC2 1192 aa8.1□□□□□ -1.11
SMG6-209ENST00000571442 MAMDC4Q6UXC1 1216 aa8.1□□□□□ -1.11
SMG6-209ENST00000571442 RNF207Q6ZRF8 634 aa8.1□□□□□ -1.11
SMG6-209ENST00000571442 ARMCX2Q7L311 632 aa8.1□□□□□ -1.11
SMG6-209ENST00000571442 SYTL5Q8TDW5 730 aaPredicted RBP8.1□□□□□ -1.11
SMG6-209ENST00000571442 DEFB118Q96PH6 123 aa8.1□□□□□ -1.11
SMG6-209ENST00000571442 TAAR1Q96RJ0 339 aa8.1□□□□□ -1.11
SMG6-209ENST00000571442 TINF2Q9BSI4 451 aa8.1□□□□□ -1.11
SMG6-209ENST00000571442 AMNQ9BXJ7 453 aa8.1□□□□□ -1.11
SMG6-209ENST00000571442 BACH2Q9BYV9 841 aa8.1□□□□□ -1.11
SMG6-209ENST00000571442 C22orf23Q9BZE7 217 aa8.1□□□□□ -1.11
SMG6-209ENST00000571442 RNF208Q9H0X6 261 aa8.1□□□□□ -1.11
SMG6-209ENST00000571442 DIS3Q9Y2L1 958 aaKnown RBP8.1□□□□□ -1.11
SMG6-209ENST00000571442 PCDHA1Q9Y5I3 950 aa8.1□□□□□ -1.11
SMG6-209ENST00000571442 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.09□□□□□ -1.11
SMG6-209ENST00000571442 CD2BP2O95400 341 aaKnown RBP8.09□□□□□ -1.11
SMG6-209ENST00000571442 CTDNEP1O95476 244 aa8.09□□□□□ -1.11
SMG6-209ENST00000571442 GJB1P08034 283 aa8.09□□□□□ -1.11
SMG6-209ENST00000571442 HOXA13P31271 388 aaPredicted RBP8.09□□□□□ -1.11
SMG6-209ENST00000571442 GNAQP50148 359 aa8.09□□□□□ -1.11
SMG6-209ENST00000571442 ALDH5A1P51649 535 aaPredicted RBP8.09□□□□□ -1.11
SMG6-209ENST00000571442 HSD17B4P51659 736 aa8.09□□□□□ -1.11
SMG6-209ENST00000571442 NEK4P51957 841 aa8.09□□□□□ -1.11
SMG6-209ENST00000571442 RCAN1P53805 252 aa8.09□□□□□ -1.11
SMG6-209ENST00000571442 UBXN2AP68543 259 aa8.09□□□□□ -1.11
SMG6-209ENST00000571442 GHRHRQ02643 423 aa8.09□□□□□ -1.11
SMG6-209ENST00000571442 ME3Q16798 604 aa8.09□□□□□ -1.11
SMG6-209ENST00000571442 MFSD14CQ5VZR4 134 aa8.09□□□□□ -1.11
SMG6-209ENST00000571442 SYNE3Q6ZMZ3 975 aa8.09□□□□□ -1.11
SMG6-209ENST00000571442 EEPD1Q7L9B9 569 aa8.09□□□□□ -1.11
SMG6-209ENST00000571442 ZNF467Q7Z7K2 595 aaPredicted RBP8.09□□□□□ -1.11
SMG6-209ENST00000571442 NECAB1Q8N987 351 aa8.09□□□□□ -1.11
SMG6-209ENST00000571442 IL31RAQ8NI17 732 aa8.09□□□□□ -1.11
SMG6-209ENST00000571442 DIS3LQ8TF46 1054 aaKnown RBP8.09□□□□□ -1.11
SMG6-209ENST00000571442 U2AF1L4Q8WU68 220 aaKnown RBP8.09□□□□□ -1.11
SMG6-209ENST00000571442 PHKBQ93100 1093 aa8.09□□□□□ -1.11
SMG6-209ENST00000571442 RRP36Q96EU6 259 aaKnown RBP8.09□□□□□ -1.11
SMG6-209ENST00000571442 ZFP91Q96JP5 570 aaPredicted RBP8.09□□□□□ -1.11
SMG6-209ENST00000571442 AIFM3Q96NN9 605 aa8.09□□□□□ -1.11
SMG6-209ENST00000571442 LZTS2Q9BRK4 669 aa8.09□□□□□ -1.11
SMG6-209ENST00000571442 CRISPLD2Q9H0B8 497 aa8.09□□□□□ -1.11
SMG6-209ENST00000571442 ALDH8A1Q9H2A2 487 aaPredicted RBP8.09□□□□□ -1.11
SMG6-209ENST00000571442 PDGFCQ9NRA1 345 aa8.09□□□□□ -1.11
SMG6-209ENST00000571442 RBM28Q9NW13 759 aaKnown RBP8.09□□□□□ -1.11
SMG6-209ENST00000571442 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.09□□□□□ -1.11
SMG6-209ENST00000571442 V9GY48 417 aaPredicted RBP8.09□□□□□ -1.11
SMG6-209ENST00000571442 ALPK3Q96L96 1907 aa8.09□□□□□ -1.11
SMG6-209ENST00000571442 PFASO15067 1338 aa8.08□□□□□ -1.12
SMG6-209ENST00000571442 MEIS2O14770 477 aa8.08□□□□□ -1.12
SMG6-209ENST00000571442 SGPL1O95470 568 aa8.08□□□□□ -1.12
SMG6-209ENST00000571442 CFBP00751 764 aa8.08□□□□□ -1.12
SMG6-209ENST00000571442 EDNRBP24530 442 aa8.08□□□□□ -1.12
SMG6-209ENST00000571442 GJA8P48165 433 aa8.08□□□□□ -1.12
SMG6-209ENST00000571442 UBE2SQ16763 222 aa8.08□□□□□ -1.12
SMG6-209ENST00000571442 GJC2Q5T442 439 aaPredicted RBP8.08□□□□□ -1.12
SMG6-209ENST00000571442 TAPT1Q6NXT6 567 aa8.08□□□□□ -1.12
SMG6-209ENST00000571442 USP17L6PQ6QN14 398 aa8.08□□□□□ -1.12
SMG6-209ENST00000571442 UBE2Q1Q7Z7E8 422 aa8.08□□□□□ -1.12
SMG6-209ENST00000571442 FBXO16Q8IX29 292 aaPredicted RBP8.08□□□□□ -1.12
SMG6-209ENST00000571442 TRMT44Q8IYL2 757 aaKnown RBP8.08□□□□□ -1.12
SMG6-209ENST00000571442 RGS22Q8NE09 1264 aa8.08□□□□□ -1.12
SMG6-209ENST00000571442 MORC4Q8TE76 937 aa8.08□□□□□ -1.12
SMG6-209ENST00000571442 ZNF274Q96GC6 653 aaPredicted RBP8.08□□□□□ -1.12
SMG6-209ENST00000571442 TBC1D32Q96NH3 1257 aa8.08□□□□□ -1.12
SMG6-209ENST00000571442 TMEM106CQ9BVX2 250 aa8.08□□□□□ -1.12
SMG6-209ENST00000571442 HMX1Q9NP08 348 aaPredicted RBP8.08□□□□□ -1.12
SMG6-209ENST00000571442 PCDH10Q9P2E7 1040 aa8.08□□□□□ -1.12
SMG6-209ENST00000571442 MRPL11Q9Y3B7 192 aaKnown RBP8.08□□□□□ -1.12
SMG6-209ENST00000571442 TRIOBPQ9H2D6 2365 aa8.08□□□□□ -1.12
SMG6-209ENST00000571442 KIAA1217Q5T5P2 1943 aa8.07□□□□□ -1.12
SMG6-209ENST00000571442 SYNGAP1Q96PV0 1343 aa8.07□□□□□ -1.12
SMG6-209ENST00000571442 MYADML2A6NDP7 307 aa8.07□□□□□ -1.12
SMG6-209ENST00000571442 STXBP3O00186 592 aa8.07□□□□□ -1.12
SMG6-209ENST00000571442 PFKFB2O60825 505 aa8.07□□□□□ -1.12
SMG6-209ENST00000571442 ARIH2O95376 493 aa8.07□□□□□ -1.12
SMG6-209ENST00000571442 IFNAR1P17181 557 aa8.07□□□□□ -1.12
SMG6-209ENST00000571442 EIF2AK2P19525 551 aaKnown RBP8.07□□□□□ -1.12
SMG6-209ENST00000571442 CNGA1P29973 690 aa8.07□□□□□ -1.12
SMG6-209ENST00000571442 ADCYAP1R1P41586 468 aa8.07□□□□□ -1.12
SMG6-209ENST00000571442 ACVR2BQ13705 512 aa8.07□□□□□ -1.12
SMG6-209ENST00000571442 PFKFB3Q16875 520 aaPredicted RBP8.07□□□□□ -1.12
SMG6-209ENST00000571442 HEATR3Q7Z4Q2 680 aa8.07□□□□□ -1.12
SMG6-209ENST00000571442 PGBD1Q96JS3 809 aa8.07□□□□□ -1.12
SMG6-209ENST00000571442 SLC26A6Q9BXS9 759 aa8.07□□□□□ -1.12
SMG6-209ENST00000571442 PXMP2Q9NR77 195 aa8.07□□□□□ -1.12
SMG6-209ENST00000571442 GJB4Q9NTQ9 266 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms