RNA–Protein interactions for RNA: ENST00000571306.1

ABR-211, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 4

Gene ABR, Length 501 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-211ENST00000571306 ZEB2O60315 1214 aa16.12■□□□□ 0.17
ABR-211ENST00000571306 PDHBP11177 359 aa16.12■□□□□ 0.17
ABR-211ENST00000571306 TOP1P11387 765 aaKnown RBP16.12■□□□□ 0.17
ABR-211ENST00000571306 ALDH5A1P51649 535 aaPredicted RBP16.12■□□□□ 0.17
ABR-211ENST00000571306 CCDC96Q2M329 555 aa16.12■□□□□ 0.17
ABR-211ENST00000571306 MCMDC2Q4G0Z9 681 aa16.12■□□□□ 0.17
ABR-211ENST00000571306 SYDE2Q5VT97 1194 aa16.12■□□□□ 0.17
ABR-211ENST00000571306 ZNF589Q86UQ0 364 aaPredicted RBP16.12■□□□□ 0.17
ABR-211ENST00000571306 PRDM12Q9H4Q4 367 aa16.12■□□□□ 0.17
ABR-211ENST00000571306 GPCPD1Q9NPB8 672 aa16.12■□□□□ 0.17
ABR-211ENST00000571306 YBX2Q9Y2T7 364 aaKnown RBP16.12■□□□□ 0.17
ABR-211ENST00000571306 FRMPD2Q68DX3 1309 aaPredicted RBP16.12■□□□□ 0.17
ABR-211ENST00000571306 LOC102724159A0A0B4J2E5 919 aa16.11■□□□□ 0.17
ABR-211ENST00000571306 SNHG28P0DPA3 235 aa16.11■□□□□ 0.17
ABR-211ENST00000571306 PWP2Q15269 919 aaKnown RBP16.11■□□□□ 0.17
ABR-211ENST00000571306 OTOP2Q7RTS6 562 aa16.11■□□□□ 0.17
ABR-211ENST00000571306 TICAM2Q86XR7 235 aa16.11■□□□□ 0.17
ABR-211ENST00000571306 WDR11Q9BZH6 1224 aa16.11■□□□□ 0.17
ABR-211ENST00000571306 ALDH8A1Q9H2A2 487 aaPredicted RBP16.11■□□□□ 0.17
ABR-211ENST00000571306 SCN10AQ9Y5Y9 1956 aa16.11■□□□□ 0.17
ABR-211ENST00000571306 EDNRBP24530 442 aa16.1■□□□□ 0.17
ABR-211ENST00000571306 RRP1P56182 461 aaKnown RBP16.1■□□□□ 0.17
ABR-211ENST00000571306 PURAQ00577 322 aaKnown RBP16.1■□□□□ 0.17
ABR-211ENST00000571306 HDAC1Q13547 482 aaPredicted RBP16.1■□□□□ 0.17
ABR-211ENST00000571306 RRP12Q5JTH9 1297 aaKnown RBP16.1■□□□□ 0.17
ABR-211ENST00000571306 AKNAD1Q5T1N1 836 aa16.1■□□□□ 0.17
ABR-211ENST00000571306 SLC30A10Q6XR72 485 aa16.1■□□□□ 0.17
ABR-211ENST00000571306 SCLYQ96I15 445 aa16.1■□□□□ 0.17
ABR-211ENST00000571306 TTC14Q96N46 770 aa16.1■□□□□ 0.17
ABR-211ENST00000571306 CRBNQ96SW2 442 aa16.1■□□□□ 0.17
ABR-211ENST00000571306 NKX2-4Q9H2Z4 354 aa16.1■□□□□ 0.17
ABR-211ENST00000571306 ADD3Q9UEY8 706 aaKnown RBP16.1■□□□□ 0.17
ABR-211ENST00000571306 ZMYM6O95789 1325 aa16.1■□□□□ 0.17
ABR-211ENST00000571306 HAND2P61296 217 aa16.09■□□□□ 0.17
ABR-211ENST00000571306 ZNF543Q08ER8 600 aa16.09■□□□□ 0.17
ABR-211ENST00000571306 NMIQ13287 307 aaPredicted RBP16.09■□□□□ 0.17
ABR-211ENST00000571306 RAB30Q15771 203 aa16.09■□□□□ 0.17
ABR-211ENST00000571306 SYMPKQ92797 1274 aaKnown RBP16.09■□□□□ 0.17
ABR-211ENST00000571306 TRMT13Q9NUP7 481 aaKnown RBP16.09■□□□□ 0.17
ABR-211ENST00000571306 SCN5AQ14524 2016 aa16.09■□□□□ 0.17
ABR-211ENST00000571306 PTPDC1A2A3K4 754 aa16.08■□□□□ 0.16
ABR-211ENST00000571306 CYP2C9P11712 490 aa16.08■□□□□ 0.16
ABR-211ENST00000571306 RABGGTBP53611 331 aa16.08■□□□□ 0.16
ABR-211ENST00000571306 RPS6P62753 249 aaKnown RBP16.08■□□□□ 0.16
ABR-211ENST00000571306 TJAP1Q5JTD0 557 aa16.08■□□□□ 0.16
ABR-211ENST00000571306 RNF207Q6ZRF8 634 aa16.08■□□□□ 0.16
ABR-211ENST00000571306 TBC1D10CQ8IV04 446 aa16.08■□□□□ 0.16
ABR-211ENST00000571306 TET1Q8NFU7 2136 aa16.08■□□□□ 0.16
ABR-211ENST00000571306 GAS2L1Q99501 681 aaPredicted RBP16.08■□□□□ 0.16
ABR-211ENST00000571306 TOMM22Q9NS69 142 aa16.08■□□□□ 0.16
ABR-211ENST00000571306 POLR3EQ9NVU0 708 aa16.08■□□□□ 0.16
ABR-211ENST00000571306 MSRAQ9UJ68 235 aa16.08■□□□□ 0.16
ABR-211ENST00000571306 REV3LO60673 3130 aa16.07■□□□□ 0.16
ABR-211ENST00000571306 MYOGP15173 224 aa16.07■□□□□ 0.16
ABR-211ENST00000571306 CALML3P27482 149 aa16.07■□□□□ 0.16
ABR-211ENST00000571306 RPUSD2Q8IZ73 545 aaKnown RBP16.07■□□□□ 0.16
ABR-211ENST00000571306 PPM1EQ8WY54 764 aa16.07■□□□□ 0.16
ABR-211ENST00000571306 COPS5Q92905 334 aa16.07■□□□□ 0.16
ABR-211ENST00000571306 TNKSO95271 1327 aa16.07■□□□□ 0.16
ABR-211ENST00000571306 WDR19Q8NEZ3 1342 aa16.07■□□□□ 0.16
ABR-211ENST00000571306 NCOR1O75376 2440 aa16.06■□□□□ 0.16
ABR-211ENST00000571306 TRIP12Q14669 1992 aaPredicted RBP16.06■□□□□ 0.16
ABR-211ENST00000571306 CCDC171Q6TFL3 1326 aa16.06■□□□□ 0.16
ABR-211ENST00000571306 A6NJR5 290 aa16.06■□□□□ 0.16
ABR-211ENST00000571306 PCP11498 1178 aaKnown RBP16.06■□□□□ 0.16
ABR-211ENST00000571306 CPT1AP50416 773 aa16.06■□□□□ 0.16
ABR-211ENST00000571306 TTLL4Q14679 1199 aa16.06■□□□□ 0.16
ABR-211ENST00000571306 NBPF20Q3BBV1 942 aa16.06■□□□□ 0.16
ABR-211ENST00000571306 MFSD6Q6ZSS7 791 aa16.06■□□□□ 0.16
ABR-211ENST00000571306 RGS22Q8NE09 1264 aa16.06■□□□□ 0.16
ABR-211ENST00000571306 DNERQ8NFT8 737 aa16.06■□□□□ 0.16
ABR-211ENST00000571306 OR6J1Q8NGC5 347 aa16.06■□□□□ 0.16
ABR-211ENST00000571306 PPP1R13LQ8WUF5 828 aa16.06■□□□□ 0.16
ABR-211ENST00000571306 ATXN2LQ8WWM7 1075 aaKnown RBP16.06■□□□□ 0.16
ABR-211ENST00000571306 TBC1D5Q92609 795 aa16.06■□□□□ 0.16
ABR-211ENST00000571306 MTG1Q9BT17 334 aaPredicted RBP16.06■□□□□ 0.16
ABR-211ENST00000571306 MTIF3Q9H2K0 278 aaKnown RBP16.06■□□□□ 0.16
ABR-211ENST00000571306 CPVLQ9H3G5 476 aa16.06■□□□□ 0.16
ABR-211ENST00000571306 NEDD4P46934 1319 aa16.05■□□□□ 0.16
ABR-211ENST00000571306 NKRFO15226 690 aaKnown RBP eCLIP16.05■□□□□ 0.16
ABR-211ENST00000571306 ARIH2O95376 493 aa16.05■□□□□ 0.16
ABR-211ENST00000571306 MYL3P08590 195 aa16.05■□□□□ 0.16
ABR-211ENST00000571306 SUPT20HL2P0C7V6 817 aa16.05■□□□□ 0.16
ABR-211ENST00000571306 GOLGA8HP0CJ92 632 aa16.05■□□□□ 0.16
ABR-211ENST00000571306 CCDC62Q6P9F0 684 aa16.05■□□□□ 0.16
ABR-211ENST00000571306 DGKHQ86XP1 1220 aa16.05■□□□□ 0.16
ABR-211ENST00000571306 ZKSCAN3Q9BRR0 538 aa16.05■□□□□ 0.16
ABR-211ENST00000571306 LNPKQ9C0E8 428 aa16.05■□□□□ 0.16
ABR-211ENST00000571306 UBA5Q9GZZ9 404 aa16.05■□□□□ 0.16
ABR-211ENST00000571306 SLC28A3Q9HAS3 691 aa16.05■□□□□ 0.16
ABR-211ENST00000571306 ZBTB47Q9UFB7 747 aaPredicted RBP16.05■□□□□ 0.16
ABR-211ENST00000571306 PNMA2Q9UL42 364 aa16.05■□□□□ 0.16
ABR-211ENST00000571306 PCDHA11Q9Y5I1 949 aa16.05■□□□□ 0.16
ABR-211ENST00000571306 SLC4A7Q9Y6M7 1214 aa16.05■□□□□ 0.16
ABR-211ENST00000571306 SDSP20132 328 aa16.04■□□□□ 0.16
ABR-211ENST00000571306 PDE4DQ08499 809 aa16.04■□□□□ 0.16
ABR-211ENST00000571306 CCDC85BQ15834 202 aaPredicted RBP16.04■□□□□ 0.16
ABR-211ENST00000571306 NFRKBQ6P4R8 1299 aa16.04■□□□□ 0.16
ABR-211ENST00000571306 SMC5Q8IY18 1101 aa16.04■□□□□ 0.16
ABR-211ENST00000571306 SCFD2Q8WU76 684 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms