RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 MPOP05164 745 aa6.28□□□□□ -1.4
NUP88-202ENST00000570937 PAMP19021 973 aa6.28□□□□□ -1.4
NUP88-202ENST00000570937 ATP2B1P20020 1258 aa6.28□□□□□ -1.4
NUP88-202ENST00000570937 GLDCP23378 1020 aa6.28□□□□□ -1.4
NUP88-202ENST00000570937 SV2CQ496J9 727 aa6.28□□□□□ -1.4
NUP88-202ENST00000570937 ZNF605Q86T29 641 aa6.28□□□□□ -1.4
NUP88-202ENST00000570937 MCOLN1Q9GZU1 580 aa6.28□□□□□ -1.4
NUP88-202ENST00000570937 KCNK12Q9HB15 430 aa6.28□□□□□ -1.4
NUP88-202ENST00000570937 PDLIM7Q9NR12 457 aa6.28□□□□□ -1.4
NUP88-202ENST00000570937 SOGA1O94964 1423 aa6.27□□□□□ -1.41
NUP88-202ENST00000570937 TEX51A0A1B0GUA7 166 aa6.27□□□□□ -1.41
NUP88-202ENST00000570937 A0A1W2PQ27 194 aa6.27□□□□□ -1.41
NUP88-202ENST00000570937 A0A1W2PQ64 194 aa6.27□□□□□ -1.41
NUP88-202ENST00000570937 A0A1W2PQC6 194 aa6.27□□□□□ -1.41
NUP88-202ENST00000570937 A0A1W2PQD8 194 aa6.27□□□□□ -1.41
NUP88-202ENST00000570937 ABLIM1O14639 778 aa6.27□□□□□ -1.41
NUP88-202ENST00000570937 SEMA7AO75326 666 aa6.27□□□□□ -1.41
NUP88-202ENST00000570937 SCG5P05408 212 aa6.27□□□□□ -1.41
NUP88-202ENST00000570937 MSL3P1P0C860 447 aa6.27□□□□□ -1.41
NUP88-202ENST00000570937 HOXC12P31275 282 aa6.27□□□□□ -1.41
NUP88-202ENST00000570937 CYP4F3Q08477 520 aa6.27□□□□□ -1.41
NUP88-202ENST00000570937 SCRN1Q12765 414 aa6.27□□□□□ -1.41
NUP88-202ENST00000570937 FZD5Q13467 585 aa6.27□□□□□ -1.41
NUP88-202ENST00000570937 CBX2Q14781 532 aaPredicted RBP6.27□□□□□ -1.41
NUP88-202ENST00000570937 PKN1Q16512 942 aa6.27□□□□□ -1.41
NUP88-202ENST00000570937 SLC10A6Q3KNW5 377 aa6.27□□□□□ -1.41
NUP88-202ENST00000570937 NBPF6Q5VWK0 638 aa6.27□□□□□ -1.41
NUP88-202ENST00000570937 CKAP2LQ8IYA6 745 aa6.27□□□□□ -1.41
NUP88-202ENST00000570937 PPP1R14AQ96A00 147 aa6.27□□□□□ -1.41
NUP88-202ENST00000570937 NBPF4Q96M43 638 aa6.27□□□□□ -1.41
NUP88-202ENST00000570937 MMP19Q99542 508 aa6.27□□□□□ -1.41
NUP88-202ENST00000570937 LGR4Q9BXB1 951 aa6.27□□□□□ -1.41
NUP88-202ENST00000570937 ST7Q9NRC1 585 aa6.27□□□□□ -1.41
NUP88-202ENST00000570937 KLHL14Q9P2G3 628 aa6.27□□□□□ -1.41
NUP88-202ENST00000570937 NPHP3-ACAD11A0A0J9YXS1 232 aa6.26□□□□□ -1.41
NUP88-202ENST00000570937 SRGAP3O43295 1099 aa6.26□□□□□ -1.41
NUP88-202ENST00000570937 TBX1O43435 398 aa6.26□□□□□ -1.41
NUP88-202ENST00000570937 TMEM62Q0P6H9 643 aa6.26□□□□□ -1.41
NUP88-202ENST00000570937 OLFML2BQ68BL8 750 aa6.26□□□□□ -1.41
NUP88-202ENST00000570937 ST13P5Q8NFI4 369 aaPredicted RBP6.26□□□□□ -1.41
NUP88-202ENST00000570937 BTN2A2Q8WVV5 523 aa6.26□□□□□ -1.41
NUP88-202ENST00000570937 KCNN1Q92952 543 aa6.26□□□□□ -1.41
NUP88-202ENST00000570937 CCDC140Q96MF4 163 aa6.26□□□□□ -1.41
NUP88-202ENST00000570937 LRP2BPQ9P2M1 347 aa6.26□□□□□ -1.41
NUP88-202ENST00000570937 MSRB2Q9Y3D2 182 aa6.26□□□□□ -1.41
NUP88-202ENST00000570937 AGRPO00253 132 aa6.25□□□□□ -1.41
NUP88-202ENST00000570937 ETV2O00321 342 aaPredicted RBP6.25□□□□□ -1.41
NUP88-202ENST00000570937 NFIBO00712 420 aa6.25□□□□□ -1.41
NUP88-202ENST00000570937 THBDP07204 575 aa6.25□□□□□ -1.41
NUP88-202ENST00000570937 TMEM253P0C7T8 217 aa6.25□□□□□ -1.41
NUP88-202ENST00000570937 C1QTNF9P0C862 333 aa6.25□□□□□ -1.41
NUP88-202ENST00000570937 PLS3P13797 630 aa6.25□□□□□ -1.41
NUP88-202ENST00000570937 SDHBP21912 280 aa6.25□□□□□ -1.41
NUP88-202ENST00000570937 RBL2Q08999 1139 aa6.25□□□□□ -1.41
NUP88-202ENST00000570937 NR1I3Q14994 352 aa6.25□□□□□ -1.41
NUP88-202ENST00000570937 TESK1Q15569 626 aa6.25□□□□□ -1.41
NUP88-202ENST00000570937 ZNF124Q15973 351 aa6.25□□□□□ -1.41
NUP88-202ENST00000570937 CILP2Q8IUL8 1156 aa6.25□□□□□ -1.41
NUP88-202ENST00000570937 NPLOC4Q8TAT6 608 aa6.25□□□□□ -1.41
NUP88-202ENST00000570937 FRS2Q8WU20 508 aa6.25□□□□□ -1.41
NUP88-202ENST00000570937 ZNF669Q96BR6 464 aaPredicted RBP6.25□□□□□ -1.41
NUP88-202ENST00000570937 SGSM3Q96HU1 749 aa6.25□□□□□ -1.41
NUP88-202ENST00000570937 TRIM55Q9BYV6 548 aa6.25□□□□□ -1.41
NUP88-202ENST00000570937 GPRC5CQ9NQ84 441 aa6.25□□□□□ -1.41
NUP88-202ENST00000570937 POLA1P09884 1462 aaPredicted RBP6.25□□□□□ -1.41
NUP88-202ENST00000570937 CUX1P39880 1505 aa6.25□□□□□ -1.41
NUP88-202ENST00000570937 WRNQ14191 1432 aaPredicted RBP eCLIP6.25□□□□□ -1.41
NUP88-202ENST00000570937 FGD5Q6ZNL6 1462 aa6.24□□□□□ -1.41
NUP88-202ENST00000570937 C7orf72A4D263 438 aa6.24□□□□□ -1.41
NUP88-202ENST00000570937 DBX1A6NMT0 343 aa6.24□□□□□ -1.41
NUP88-202ENST00000570937 CPP00450 1065 aa6.24□□□□□ -1.41
NUP88-202ENST00000570937 DBHP09172 617 aa6.24□□□□□ -1.41
NUP88-202ENST00000570937 VIPR1P32241 457 aa6.24□□□□□ -1.41
NUP88-202ENST00000570937 RAP1GAPP47736 663 aa6.24□□□□□ -1.41
NUP88-202ENST00000570937 E4F1Q66K89 784 aaPredicted RBP6.24□□□□□ -1.41
NUP88-202ENST00000570937 IQCEQ6IPM2 695 aa6.24□□□□□ -1.41
NUP88-202ENST00000570937 CPNE8Q86YQ8 564 aa6.24□□□□□ -1.41
NUP88-202ENST00000570937 MTA3Q9BTC8 594 aa6.24□□□□□ -1.41
NUP88-202ENST00000570937 HIRIP3Q9BW71 556 aaPredicted RBP6.24□□□□□ -1.41
NUP88-202ENST00000570937 GCM1Q9NP62 436 aa6.24□□□□□ -1.41
NUP88-202ENST00000570937 CD320Q9NPF0 282 aa6.24□□□□□ -1.41
NUP88-202ENST00000570937 CLEC1BQ9P126 229 aa6.24□□□□□ -1.41
NUP88-202ENST00000570937 MBD1Q9UIS9 605 aaPredicted RBP6.24□□□□□ -1.41
NUP88-202ENST00000570937 AQRO60306 1485 aaKnown RBP eCLIP6.23□□□□□ -1.41
NUP88-202ENST00000570937 A0A1W2PQU0 124 aa6.23□□□□□ -1.41
NUP88-202ENST00000570937 PPP1R11O60927 126 aaPredicted RBP6.23□□□□□ -1.41
NUP88-202ENST00000570937 CYBBP04839 570 aa6.23□□□□□ -1.41
NUP88-202ENST00000570937 GLI4P10075 376 aa6.23□□□□□ -1.41
NUP88-202ENST00000570937 MAPKAPK2P49137 400 aa6.23□□□□□ -1.41
NUP88-202ENST00000570937 GFRA1P56159 465 aa6.23□□□□□ -1.41
NUP88-202ENST00000570937 DLG4P78352 724 aa6.23□□□□□ -1.41
NUP88-202ENST00000570937 SRSF3P84103 164 aaKnown RBP6.23□□□□□ -1.41
NUP88-202ENST00000570937 RAB3GAP1Q15042 981 aa6.23□□□□□ -1.41
NUP88-202ENST00000570937 ACBD5Q5T8D3 534 aaPredicted RBP6.23□□□□□ -1.41
NUP88-202ENST00000570937 PAQR3Q6TCH7 311 aa6.23□□□□□ -1.41
NUP88-202ENST00000570937 RPTNQ6XPR3 784 aa6.23□□□□□ -1.41
NUP88-202ENST00000570937 KREMEN2Q8NCW0 462 aa6.23□□□□□ -1.41
NUP88-202ENST00000570937 ZNF608Q9ULD9 1512 aaPredicted RBP6.23□□□□□ -1.41
NUP88-202ENST00000570937 RAD54L2Q9Y4B4 1467 aa6.22□□□□□ -1.41
NUP88-202ENST00000570937 TDRD9Q8NDG6 1382 aaKnown RBP6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms