RNA–Protein interactions for RNA: ENST00000569794.1

CHD9-220, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-220ENST00000569794 LNPKQ9C0E8 428 aa8.12□□□□□ -1.11
CHD9-220ENST00000569794 BCAS3Q9H6U6 928 aa8.12□□□□□ -1.11
CHD9-220ENST00000569794 RXFP1Q9HBX9 757 aa8.12□□□□□ -1.11
CHD9-220ENST00000569794 GJA9P57773 515 aa8.11□□□□□ -1.11
CHD9-220ENST00000569794 RCSD1Q6JBY9 416 aa8.11□□□□□ -1.11
CHD9-220ENST00000569794 FERD3LQ96RJ6 166 aa8.11□□□□□ -1.11
CHD9-220ENST00000569794 A0A087WZG4 1122 aa8.1□□□□□ -1.11
CHD9-220ENST00000569794 ITGB3P05106 788 aa8.1□□□□□ -1.11
CHD9-220ENST00000569794 BCL2L13Q9BXK5 485 aa8.1□□□□□ -1.11
CHD9-220ENST00000569794 FBLN5Q9UBX5 448 aa8.1□□□□□ -1.11
CHD9-220ENST00000569794 ZNF214Q9UL59 606 aaPredicted RBP8.1□□□□□ -1.11
CHD9-220ENST00000569794 CBFA2T2O43439 604 aa8.09□□□□□ -1.11
CHD9-220ENST00000569794 PDIA4P13667 645 aaKnown RBP8.09□□□□□ -1.11
CHD9-220ENST00000569794 GUCY2CP25092 1073 aa8.09□□□□□ -1.11
CHD9-220ENST00000569794 ZNF326Q5BKZ1 582 aaKnown RBP8.09□□□□□ -1.11
CHD9-220ENST00000569794 EEF1DP3Q658K8 133 aa8.09□□□□□ -1.11
CHD9-220ENST00000569794 RUFY4Q6ZNE9 571 aa8.09□□□□□ -1.11
CHD9-220ENST00000569794 CABP7Q86V35 215 aa8.09□□□□□ -1.11
CHD9-220ENST00000569794 RBBP8NLQ8NC74 664 aaPredicted RBP8.09□□□□□ -1.11
CHD9-220ENST00000569794 SMARCC2Q8TAQ2 1214 aa8.09□□□□□ -1.11
CHD9-220ENST00000569794 GIPC2Q8TF65 315 aa8.09□□□□□ -1.11
CHD9-220ENST00000569794 CPA5Q8WXQ8 436 aa8.09□□□□□ -1.11
CHD9-220ENST00000569794 NOX5Q96PH1 765 aa8.09□□□□□ -1.11
CHD9-220ENST00000569794 DIS3Q9Y2L1 958 aaKnown RBP8.09□□□□□ -1.11
CHD9-220ENST00000569794 TRIM26Q12899 539 aaPredicted RBP8.08□□□□□ -1.12
CHD9-220ENST00000569794 TCEAL1Q15170 157 aa8.08□□□□□ -1.12
CHD9-220ENST00000569794 LDLRAD1Q5T700 205 aa8.08□□□□□ -1.12
CHD9-220ENST00000569794 KRTAP5-3Q6L8H2 238 aa8.08□□□□□ -1.12
CHD9-220ENST00000569794 LZTR1Q8N653 840 aa8.08□□□□□ -1.12
CHD9-220ENST00000569794 PEX11GQ96HA9 241 aa8.08□□□□□ -1.12
CHD9-220ENST00000569794 RBM15Q96T37 977 aaKnown RBP eCLIP8.08□□□□□ -1.121e-6■■□□□ 12.5
CHD9-220ENST00000569794 MCMBPQ9BTE3 642 aa8.08□□□□□ -1.12
CHD9-220ENST00000569794 SPATA6Q9NWH7 488 aaPredicted RBP8.08□□□□□ -1.12
CHD9-220ENST00000569794 RWDD3Q9Y3V2 267 aa8.08□□□□□ -1.12
CHD9-220ENST00000569794 SARSP49591 514 aaKnown RBP8.07□□□□□ -1.12
CHD9-220ENST00000569794 ADAM17P78536 824 aa8.07□□□□□ -1.12
CHD9-220ENST00000569794 CACNB2Q08289 660 aaPredicted RBP8.07□□□□□ -1.12
CHD9-220ENST00000569794 PPP2R5DQ14738 602 aa8.07□□□□□ -1.12
CHD9-220ENST00000569794 SLC9A5Q14940 896 aa8.07□□□□□ -1.12
CHD9-220ENST00000569794 ZNF761Q86XN6 746 aaPredicted RBP8.07□□□□□ -1.12
CHD9-220ENST00000569794 NETO2Q8NC67 525 aa8.07□□□□□ -1.12
CHD9-220ENST00000569794 SMPD4Q9NXE4 827 aa8.07□□□□□ -1.12
CHD9-220ENST00000569794 NTMQ9P121 344 aa8.07□□□□□ -1.12
CHD9-220ENST00000569794 NUDT5Q9UKK9 219 aa8.07□□□□□ -1.12
CHD9-220ENST00000569794 PPT2Q9UMR5 302 aa8.07□□□□□ -1.12
CHD9-220ENST00000569794 AURKAO14965 403 aa8.06□□□□□ -1.12
CHD9-220ENST00000569794 TNFRSF1AP19438 455 aa8.06□□□□□ -1.12
CHD9-220ENST00000569794 FBXW10Q5XX13 1052 aa8.06□□□□□ -1.12
CHD9-220ENST00000569794 RNF34Q969K3 372 aa8.06□□□□□ -1.12
CHD9-220ENST00000569794 WHRNQ9P202 907 aa8.06□□□□□ -1.12
CHD9-220ENST00000569794 STXBP3O00186 592 aa8.05□□□□□ -1.12
CHD9-220ENST00000569794 PPP1R11O60927 126 aaPredicted RBP8.05□□□□□ -1.12
CHD9-220ENST00000569794 TMEM87AQ8NBN3 555 aa8.05□□□□□ -1.12
CHD9-220ENST00000569794 ADCY4Q8NFM4 1077 aa8.05□□□□□ -1.12
CHD9-220ENST00000569794 HAUS7Q99871 368 aa8.05□□□□□ -1.12
CHD9-220ENST00000569794 MTA3Q9BTC8 594 aa8.05□□□□□ -1.12
CHD9-220ENST00000569794 BCL11AQ9H165 835 aa8.05□□□□□ -1.12
CHD9-220ENST00000569794 LTBP3Q9NS15 1303 aa8.04□□□□□ -1.12
CHD9-220ENST00000569794 ZBTB8AQ96BR9 441 aa8.04□□□□□ -1.12
CHD9-220ENST00000569794 KRTAP3-1Q9BYR8 98 aa8.04□□□□□ -1.12
CHD9-220ENST00000569794 ZBTB7AO95365 584 aa8.03□□□□□ -1.12
CHD9-220ENST00000569794 TTLL7Q6ZT98 887 aa8.03□□□□□ -1.12
CHD9-220ENST00000569794 LINC00482Q8N8I6 264 aa8.03□□□□□ -1.12
CHD9-220ENST00000569794 ADAMTS17Q8TE56 1095 aa8.03□□□□□ -1.12
CHD9-220ENST00000569794 KLHL25Q9H0H3 589 aa8.03□□□□□ -1.12
CHD9-220ENST00000569794 GULP1Q9UBP9 304 aa8.03□□□□□ -1.12
CHD9-220ENST00000569794 AKAP8O43823 692 aaKnown RBP8.02□□□□□ -1.13
CHD9-220ENST00000569794 ZNF76P36508 570 aa8.02□□□□□ -1.13
CHD9-220ENST00000569794 SEPHS1P49903 392 aa8.02□□□□□ -1.13
CHD9-220ENST00000569794 ZXDAP98168 799 aa8.02□□□□□ -1.13
CHD9-220ENST00000569794 WWC2Q6AWC2 1192 aa8.02□□□□□ -1.13
CHD9-220ENST00000569794 DDX11Q96FC9 970 aa8.02□□□□□ -1.13
CHD9-220ENST00000569794 MATN3O15232 486 aa8.01□□□□□ -1.13
CHD9-220ENST00000569794 VAMP4O75379 141 aa8.01□□□□□ -1.13
CHD9-220ENST00000569794 SMAD4Q13485 552 aaKnown RBP8.01□□□□□ -1.13
CHD9-220ENST00000569794 DPY19L1Q2PZI1 675 aa8.01□□□□□ -1.13
CHD9-220ENST00000569794 ZNF394Q53GI3 561 aa8.01□□□□□ -1.13
CHD9-220ENST00000569794 CPNE8Q86YQ8 564 aa8.01□□□□□ -1.13
CHD9-220ENST00000569794 GBP3Q9H0R5 595 aa8.01□□□□□ -1.13
CHD9-220ENST00000569794 BACE2Q9Y5Z0 518 aa8.01□□□□□ -1.13
CHD9-220ENST00000569794 C2orf71A6NGG8 1288 aa8□□□□□ -1.13
CHD9-220ENST00000569794 C1QTNF3-AMACRE9PGA6 284 aa8□□□□□ -1.13
CHD9-220ENST00000569794 C8BP07358 591 aa8□□□□□ -1.13
CHD9-220ENST00000569794 CYP2C8P10632 490 aa8□□□□□ -1.13
CHD9-220ENST00000569794 GNPTABQ3T906 1256 aa8□□□□□ -1.13
CHD9-220ENST00000569794 TBC1D10BQ4KMP7 808 aaPredicted RBP8□□□□□ -1.13
CHD9-220ENST00000569794 CPZQ66K79 652 aa8□□□□□ -1.13
CHD9-220ENST00000569794 HEATR6Q6AI08 1181 aaKnown RBP8□□□□□ -1.13
CHD9-220ENST00000569794 TTC9BQ8N6N2 239 aa8□□□□□ -1.13
CHD9-220ENST00000569794 SAMD11Q96NU1 681 aa8□□□□□ -1.13
CHD9-220ENST00000569794 C1QTNF3Q9BXJ4 246 aa8□□□□□ -1.13
CHD9-220ENST00000569794 GZF1Q9H116 711 aaPredicted RBP8□□□□□ -1.13
CHD9-220ENST00000569794 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8□□□□□ -1.13
CHD9-220ENST00000569794 PCDHGB7Q9Y5F8 929 aa8□□□□□ -1.13
CHD9-220ENST00000569794 SMARCA5O60264 1052 aaPredicted RBP7.99□□□□□ -1.13
CHD9-220ENST00000569794 PLATP00750 562 aa7.99□□□□□ -1.13
CHD9-220ENST00000569794 USP33Q8TEY7 942 aa7.99□□□□□ -1.13
CHD9-220ENST00000569794 GORASP1Q9BQQ3 440 aa7.99□□□□□ -1.13
CHD9-220ENST00000569794 CGGBP1Q9UFW8 167 aaPredicted RBP7.99□□□□□ -1.13
CHD9-220ENST00000569794 SIT1Q9Y3P8 196 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms