RNA–Protein interactions for RNA: ENST00000569288.1

LINC00555-201, long intergenic non-protein coding RNA 555, humanhuman

BASIC

Gene LINC00555, Length 442 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00555-201ENST00000569288 DTHD1Q6ZMT9 781 aa10.8□□□□□ -0.68
LINC00555-201ENST00000569288 CLEC10AQ8IUN9 316 aa10.8□□□□□ -0.68
LINC00555-201ENST00000569288 MB21D1Q8N884 522 aa10.8□□□□□ -0.68
LINC00555-201ENST00000569288 FSIP1Q8NA03 581 aa10.8□□□□□ -0.68
LINC00555-201ENST00000569288 PROCA1Q8NCQ7 364 aaPredicted RBP10.8□□□□□ -0.68
LINC00555-201ENST00000569288 ZKSCAN4Q969J2 545 aaPredicted RBP10.8□□□□□ -0.68
LINC00555-201ENST00000569288 WNK4Q96J92 1243 aa10.8□□□□□ -0.68
LINC00555-201ENST00000569288 CHAMP1Q96JM3 812 aa10.8□□□□□ -0.68
LINC00555-201ENST00000569288 CLMNQ96JQ2 1002 aa10.8□□□□□ -0.68
LINC00555-201ENST00000569288 FEZ1Q99689 392 aa10.8□□□□□ -0.68
LINC00555-201ENST00000569288 CCSER1Q9C0I3 900 aa10.8□□□□□ -0.68
LINC00555-201ENST00000569288 TNMDQ9H2S6 317 aa10.8□□□□□ -0.68
LINC00555-201ENST00000569288 CUEDC2Q9H467 287 aa10.8□□□□□ -0.68
LINC00555-201ENST00000569288 MAGEF1Q9HAY2 307 aa10.8□□□□□ -0.68
LINC00555-201ENST00000569288 EMILIN3Q9NT22 766 aa10.8□□□□□ -0.68
LINC00555-201ENST00000569288 TMOD4Q9NZQ9 345 aa10.8□□□□□ -0.68
LINC00555-201ENST00000569288 KCNH3Q9ULD8 1083 aa10.8□□□□□ -0.68
LINC00555-201ENST00000569288 PPP1R9AQ9ULJ8 1098 aa10.8□□□□□ -0.68
LINC00555-201ENST00000569288 TESPA1A2RU30 521 aaPredicted RBP10.79□□□□□ -0.68
LINC00555-201ENST00000569288 USP17L15C9J2P7 530 aa10.79□□□□□ -0.68
LINC00555-201ENST00000569288 USP17L13C9JLJ4 530 aa10.79□□□□□ -0.68
LINC00555-201ENST00000569288 USP17L11C9JVI0 530 aa10.79□□□□□ -0.68
LINC00555-201ENST00000569288 USP17L18D6R9N7 530 aa10.79□□□□□ -0.68
LINC00555-201ENST00000569288 USP17L22D6RA61 530 aa10.79□□□□□ -0.68
LINC00555-201ENST00000569288 USP17L17D6RBQ6 530 aa10.79□□□□□ -0.68
LINC00555-201ENST00000569288 USP17L19D6RCP7 530 aa10.79□□□□□ -0.68
LINC00555-201ENST00000569288 USP17L20D6RJB6 530 aa10.79□□□□□ -0.68
LINC00555-201ENST00000569288 MEIS2O14770 477 aa10.79□□□□□ -0.68
LINC00555-201ENST00000569288 DTNBO60941 627 aa10.79□□□□□ -0.68
LINC00555-201ENST00000569288 NR1I2O75469 434 aa10.79□□□□□ -0.68
LINC00555-201ENST00000569288 SLURP2P0DP57 97 aa10.79□□□□□ -0.68
LINC00555-201ENST00000569288 LIG1P18858 919 aa10.79□□□□□ -0.68
LINC00555-201ENST00000569288 SLC16A2P36021 539 aa10.79□□□□□ -0.68
LINC00555-201ENST00000569288 TM4SF4P48230 202 aa10.79□□□□□ -0.68
LINC00555-201ENST00000569288 FXR2P51116 673 aaKnown RBP eCLIP10.79□□□□□ -0.68
LINC00555-201ENST00000569288 FOSBP53539 338 aa10.79□□□□□ -0.68
LINC00555-201ENST00000569288 CEBPZQ03701 1054 aaKnown RBP10.79□□□□□ -0.68
LINC00555-201ENST00000569288 USP17L24Q0WX57 530 aa10.79□□□□□ -0.68
LINC00555-201ENST00000569288 SPP2Q13103 211 aa10.79□□□□□ -0.68
LINC00555-201ENST00000569288 EARS2Q5JPH6 523 aaKnown RBP10.79□□□□□ -0.68
LINC00555-201ENST00000569288 FAM83BQ5T0W9 1011 aa10.79□□□□□ -0.68
LINC00555-201ENST00000569288 CYP4F22Q6NT55 531 aa10.79□□□□□ -0.68
LINC00555-201ENST00000569288 SHC4Q6S5L8 630 aa10.79□□□□□ -0.68
LINC00555-201ENST00000569288 CATSPERGQ6ZRH7 1159 aa10.79□□□□□ -0.68
LINC00555-201ENST00000569288 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.79□□□□□ -0.68
LINC00555-201ENST00000569288 GTF3C2Q8WUA4 911 aaPredicted RBP10.79□□□□□ -0.68
LINC00555-201ENST00000569288 COA7Q96BR5 231 aa10.79□□□□□ -0.68
LINC00555-201ENST00000569288 OPTNQ96CV9 577 aa10.79□□□□□ -0.68
LINC00555-201ENST00000569288 MTMR9Q96QG7 549 aa10.79□□□□□ -0.68
LINC00555-201ENST00000569288 FUCA2Q9BTY2 467 aa10.79□□□□□ -0.68
LINC00555-201ENST00000569288 KCNH4Q9UQ05 1017 aa10.79□□□□□ -0.68
LINC00555-201ENST00000569288 ZHX2Q9Y6X8 837 aa10.79□□□□□ -0.68
LINC00555-201ENST00000569288 MYH15Q9Y2K3 1946 aa10.79□□□□□ -0.68
LINC00555-201ENST00000569288 MANSC4A6NHS7 340 aaPredicted RBP10.78□□□□□ -0.68
LINC00555-201ENST00000569288 GCOM1H8Y6P7 765 aaPredicted RBP10.78□□□□□ -0.68
LINC00555-201ENST00000569288 SLFN14P0C7P3 912 aa10.78□□□□□ -0.68
LINC00555-201ENST00000569288 POLR2MP0CAP2 368 aa10.78□□□□□ -0.68
LINC00555-201ENST00000569288 DSG3P32926 999 aa10.78□□□□□ -0.68
LINC00555-201ENST00000569288 COPB2P35606 906 aa10.78□□□□□ -0.68
LINC00555-201ENST00000569288 SREBF1P36956 1147 aa10.78□□□□□ -0.68
LINC00555-201ENST00000569288 TXLNAP40222 546 aa10.78□□□□□ -0.68
LINC00555-201ENST00000569288 NDUFA8P51970 172 aa10.78□□□□□ -0.68
LINC00555-201ENST00000569288 IKQ13123 557 aaPredicted RBP10.78□□□□□ -0.68
LINC00555-201ENST00000569288 PABPC4Q13310 644 aaKnown RBP eCLIP10.78□□□□□ -0.68
LINC00555-201ENST00000569288 Q4G0T1 1027 aa10.78□□□□□ -0.68
LINC00555-201ENST00000569288 NT5DC1Q5TFE4 455 aa10.78□□□□□ -0.68
LINC00555-201ENST00000569288 FASTKD5Q7L8L6 764 aaKnown RBP10.78□□□□□ -0.68
LINC00555-201ENST00000569288 NIPA1Q7RTP0 329 aa10.78□□□□□ -0.68
LINC00555-201ENST00000569288 SLFN12Q8IYM2 578 aa10.78□□□□□ -0.68
LINC00555-201ENST00000569288 TRIML1Q8N9V2 468 aa10.78□□□□□ -0.68
LINC00555-201ENST00000569288 IQUBQ8NA54 791 aa10.78□□□□□ -0.68
LINC00555-201ENST00000569288 TBCKQ8TEA7 893 aa10.78□□□□□ -0.68
LINC00555-201ENST00000569288 FAM20AQ96MK3 541 aa10.78□□□□□ -0.68
LINC00555-201ENST00000569288 SDF4Q9BRK5 362 aa10.78□□□□□ -0.68
LINC00555-201ENST00000569288 ELP3Q9H9T3 547 aa10.78□□□□□ -0.68
LINC00555-201ENST00000569288 ZCCHC17Q9NP64 241 aaKnown RBP10.78□□□□□ -0.68
LINC00555-201ENST00000569288 MTMR7Q9Y216 660 aa10.78□□□□□ -0.68
LINC00555-201ENST00000569288 SLC45A1Q9Y2W3 748 aa10.78□□□□□ -0.68
LINC00555-201ENST00000569288 PARP14Q460N5 1801 aa10.77□□□□□ -0.68
LINC00555-201ENST00000569288 LOC102724159A0A0B4J2E5 919 aa10.77□□□□□ -0.69
LINC00555-201ENST00000569288 SPDYE3A6NKU9 549 aa10.77□□□□□ -0.69
LINC00555-201ENST00000569288 IRF6O14896 467 aa10.77□□□□□ -0.69
LINC00555-201ENST00000569288 MAFGO15525 162 aa10.77□□□□□ -0.69
LINC00555-201ENST00000569288 NEMFO60524 1076 aa10.77□□□□□ -0.69
LINC00555-201ENST00000569288 OR52Z1P0C646 297 aa10.77□□□□□ -0.69
LINC00555-201ENST00000569288 PFKFB1P16118 471 aa10.77□□□□□ -0.69
LINC00555-201ENST00000569288 VCAM1P19320 739 aa10.77□□□□□ -0.69
LINC00555-201ENST00000569288 MUTP22033 750 aa10.77□□□□□ -0.69
LINC00555-201ENST00000569288 MARCKSP29966 332 aaPredicted RBP10.77□□□□□ -0.69
LINC00555-201ENST00000569288 GJA5P36382 358 aa10.77□□□□□ -0.69
LINC00555-201ENST00000569288 HSD17B4P51659 736 aa10.77□□□□□ -0.69
LINC00555-201ENST00000569288 GTF2A2P52657 109 aa10.77□□□□□ -0.69
LINC00555-201ENST00000569288 MAP2K1Q02750 393 aaPredicted RBP10.77□□□□□ -0.69
LINC00555-201ENST00000569288 SREBF2Q12772 1141 aa10.77□□□□□ -0.69
LINC00555-201ENST00000569288 PWP2Q15269 919 aaKnown RBP10.77□□□□□ -0.69
LINC00555-201ENST00000569288 ZNF174Q15697 407 aa10.77□□□□□ -0.69
LINC00555-201ENST00000569288 INF2Q27J81 1249 aa10.77□□□□□ -0.69
LINC00555-201ENST00000569288 SHROOM1Q2M3G4 852 aaPredicted RBP10.77□□□□□ -0.69
LINC00555-201ENST00000569288 KIAA1755Q5JYT7 1200 aa10.77□□□□□ -0.69
LINC00555-201ENST00000569288 IGSF22Q8N9C0 903 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms