RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-209	ENST00000569243	LTBP3	Q9NS15	1303 aa		6.02	□□□□□ -1.45
UBR1-209	ENST00000569243		A0A1W2PQ27	194 aa		6.02	□□□□□ -1.45
UBR1-209	ENST00000569243		A0A1W2PQ64	194 aa		6.02	□□□□□ -1.45
UBR1-209	ENST00000569243		A0A1W2PQC6	194 aa		6.02	□□□□□ -1.45
UBR1-209	ENST00000569243		A0A1W2PQD8	194 aa		6.02	□□□□□ -1.45
UBR1-209	ENST00000569243	DBH	P09172	617 aa		6.02	□□□□□ -1.45
UBR1-209	ENST00000569243	NCAM1	P13591	858 aa		6.02	□□□□□ -1.45
UBR1-209	ENST00000569243	ZNF16	P17020	682 aa	Predicted RBP	6.02	□□□□□ -1.45
UBR1-209	ENST00000569243	ZNF76	P36508	570 aa		6.02	□□□□□ -1.45
UBR1-209	ENST00000569243	TGFB2	P61812	414 aa		6.02	□□□□□ -1.45
UBR1-209	ENST00000569243	MVK	Q03426	396 aa		6.02	□□□□□ -1.45
UBR1-209	ENST00000569243	C7orf61	Q8IZ16	206 aa		6.02	□□□□□ -1.45
UBR1-209	ENST00000569243	TMEM87A	Q8NBN3	555 aa		6.02	□□□□□ -1.45
UBR1-209	ENST00000569243	ADAMTS17	Q8TE56	1095 aa		6.02	□□□□□ -1.45
UBR1-209	ENST00000569243	SRRT	Q9BXP5	876 aa	Known RBP	6.02	□□□□□ -1.45
UBR1-209	ENST00000569243	KLC2	Q9H0B6	622 aa		6.02	□□□□□ -1.45
UBR1-209	ENST00000569243	ANTXR1	Q9H6X2	564 aa		6.02	□□□□□ -1.45
UBR1-209	ENST00000569243	SPATA6	Q9NWH7	488 aa	Predicted RBP	6.02	□□□□□ -1.45
UBR1-209	ENST00000569243	CYBB	P04839	570 aa		6.01	□□□□□ -1.45
UBR1-209	ENST00000569243	ASGR2	P07307	311 aa		6.01	□□□□□ -1.45
UBR1-209	ENST00000569243	CTSK	P43235	329 aa		6.01	□□□□□ -1.45
UBR1-209	ENST00000569243	PMS1	P54277	932 aa	Known RBP	6.01	□□□□□ -1.45
UBR1-209	ENST00000569243	PRR5	P85299	388 aa		6.01	□□□□□ -1.45
UBR1-209	ENST00000569243	COL9A2	Q14055	689 aa	Predicted RBP	6.01	□□□□□ -1.45
UBR1-209	ENST00000569243	FHL2	Q14192	279 aa		6.01	□□□□□ -1.45
UBR1-209	ENST00000569243	ICAM4	Q14773	271 aa		6.01	□□□□□ -1.45
UBR1-209	ENST00000569243	PALM2	Q8IXS6	379 aa		6.01	□□□□□ -1.45
UBR1-209	ENST00000569243	NOX5	Q96PH1	765 aa		6.01	□□□□□ -1.45
UBR1-209	ENST00000569243	CDK5RAP1	Q96SZ6	601 aa	Known RBP	6.01	□□□□□ -1.45
UBR1-209	ENST00000569243	FBXL21	Q9UKT6	434 aa		6.01	□□□□□ -1.45
UBR1-209	ENST00000569243	TNFRSF18	Q9Y5U5	241 aa		6.01	□□□□□ -1.45
UBR1-209	ENST00000569243		F8W031	263 aa	Predicted RBP	6	□□□□□ -1.45
UBR1-209	ENST00000569243	ACR	P10323	421 aa		6	□□□□□ -1.45
UBR1-209	ENST00000569243	B3GNT8	Q7Z7M8	397 aa		6	□□□□□ -1.45
UBR1-209	ENST00000569243	LGI4	Q8N135	537 aa		6	□□□□□ -1.45
UBR1-209	ENST00000569243	ZNF512B	Q96KM6	892 aa	Predicted RBP	6	□□□□□ -1.45
UBR1-209	ENST00000569243	SPATA32	Q96LK8	384 aa		6	□□□□□ -1.45
UBR1-209	ENST00000569243	GFOD1	Q9NXC2	390 aa		6	□□□□□ -1.45
UBR1-209	ENST00000569243		A0A087WZG4	1122 aa		5.99	□□□□□ -1.45
UBR1-209	ENST00000569243	NOP2	P46087	812 aa	Known RBP	5.99	□□□□□ -1.45
UBR1-209	ENST00000569243	RBM10	P98175	930 aa	Known RBP	5.99	□□□□□ -1.45
UBR1-209	ENST00000569243	RGL3	Q3MIN7	710 aa		5.99	□□□□□ -1.45
UBR1-209	ENST00000569243	BICRAL	Q6AI39	1079 aa		5.99	□□□□□ -1.45
UBR1-209	ENST00000569243	TTLL7	Q6ZT98	887 aa		5.99	□□□□□ -1.45
UBR1-209	ENST00000569243	TMEM52	Q8NDY8	209 aa		5.99	□□□□□ -1.45
UBR1-209	ENST00000569243		A0A1W2PQJ5	194 aa		5.98	□□□□□ -1.45
UBR1-209	ENST00000569243	SRGAP3	O43295	1099 aa		5.98	□□□□□ -1.45
UBR1-209	ENST00000569243	INHBE	P58166	350 aa		5.98	□□□□□ -1.45
UBR1-209	ENST00000569243	FANCC	Q00597	558 aa		5.98	□□□□□ -1.45
UBR1-209	ENST00000569243	HLA-DQA1	Q5Y7H0	255 aa		5.98	□□□□□ -1.45
UBR1-209	ENST00000569243	CWF19L1	Q69YN2	538 aa	Known RBP	5.98	□□□□□ -1.45
UBR1-209	ENST00000569243	ZNF585A	Q6P3V2	769 aa		5.98	□□□□□ -1.45
UBR1-209	ENST00000569243	USP48	Q86UV5	1035 aa		5.98	□□□□□ -1.45
UBR1-209	ENST00000569243	CCDC144CP	Q8IYA2	1237 aa		5.98	□□□□□ -1.45
UBR1-209	ENST00000569243	ALG3	Q92685	438 aa		5.98	□□□□□ -1.45
UBR1-209	ENST00000569243	BACH2	Q9BYV9	841 aa		5.98	□□□□□ -1.45
UBR1-209	ENST00000569243	AP5S1	Q9NUS5	200 aa		5.98	□□□□□ -1.45
UBR1-209	ENST00000569243	DBR1	Q9UK59	544 aa	Known RBP	5.98	□□□□□ -1.45
UBR1-209	ENST00000569243	FHOD1	Q9Y613	1164 aa		5.98	□□□□□ -1.45
UBR1-209	ENST00000569243	MEIS1	O00470	390 aa		5.97	□□□□□ -1.45
UBR1-209	ENST00000569243	SHOX	O15266	292 aa		5.97	□□□□□ -1.45
UBR1-209	ENST00000569243	VAMP1	P23763	118 aa		5.97	□□□□□ -1.45
UBR1-209	ENST00000569243	KIAA2012	Q0VF49	1180 aa		5.97	□□□□□ -1.45
UBR1-209	ENST00000569243	RTP2	Q5QGT7	225 aa		5.97	□□□□□ -1.45
UBR1-209	ENST00000569243	CYP2R1	Q6VVX0	501 aa		5.97	□□□□□ -1.45
UBR1-209	ENST00000569243	NLGN2	Q8NFZ4	835 aa		5.97	□□□□□ -1.45
UBR1-209	ENST00000569243	ZBTB8A	Q96BR9	441 aa		5.97	□□□□□ -1.45
UBR1-209	ENST00000569243	NAF1	Q96HR8	494 aa	Known RBP	5.97	□□□□□ -1.45
UBR1-209	ENST00000569243	DSCC1	Q9BVC3	393 aa		5.97	□□□□□ -1.45
UBR1-209	ENST00000569243	SLC12A9	Q9BXP2	914 aa		5.97	□□□□□ -1.45
UBR1-209	ENST00000569243	BCAS3	Q9H6U6	928 aa		5.97	□□□□□ -1.45
UBR1-209	ENST00000569243		C9IYK1	514 aa		5.96	□□□□□ -1.46
UBR1-209	ENST00000569243	GUCY2C	P25092	1073 aa		5.96	□□□□□ -1.46
UBR1-209	ENST00000569243	CORO7	P57737	925 aa		5.96	□□□□□ -1.46
UBR1-209	ENST00000569243	SMARCC2	Q8TAQ2	1214 aa		5.96	□□□□□ -1.46
UBR1-209	ENST00000569243	FERD3L	Q96RJ6	166 aa		5.96	□□□□□ -1.46
UBR1-209	ENST00000569243	ZNF341	Q9BYN7	854 aa		5.96	□□□□□ -1.46
UBR1-209	ENST00000569243	DDX41	Q9UJV9	622 aa	Known RBP	5.96	□□□□□ -1.46
UBR1-209	ENST00000569243	CD247	P20963	164 aa		5.95	□□□□□ -1.46
UBR1-209	ENST00000569243	PML	P29590	882 aa		5.95	□□□□□ -1.46
UBR1-209	ENST00000569243	SMAD4	Q13485	552 aa	Known RBP	5.95	□□□□□ -1.46
UBR1-209	ENST00000569243	NOL9	Q5SY16	702 aa	Known RBP	5.95	□□□□□ -1.46
UBR1-209	ENST00000569243	TMCO4	Q5TGY1	634 aa		5.95	□□□□□ -1.46
UBR1-209	ENST00000569243	CRTC3	Q6UUV7	619 aa		5.95	□□□□□ -1.46
UBR1-209	ENST00000569243	UNC5A	Q6ZN44	842 aa		5.95	□□□□□ -1.46
UBR1-209	ENST00000569243	RNF34	Q969K3	372 aa		5.95	□□□□□ -1.46
UBR1-209	ENST00000569243	CHFR	Q96EP1	664 aa		5.95	□□□□□ -1.46
UBR1-209	ENST00000569243	GP6	Q9HCN6	339 aa		5.95	□□□□□ -1.46
UBR1-209	ENST00000569243	CD248	Q9HCU0	757 aa		5.95	□□□□□ -1.46
UBR1-209	ENST00000569243	ZNF214	Q9UL59	606 aa	Predicted RBP	5.95	□□□□□ -1.46
UBR1-209	ENST00000569243	DIS3	Q9Y2L1	958 aa	Known RBP	5.95	□□□□□ -1.46
UBR1-209	ENST00000569243	SF3B6	Q9Y3B4	125 aa	Known RBP	5.95	□□□□□ -1.46
UBR1-209	ENST00000569243	SLC12A7	Q9Y666	1083 aa		5.95	□□□□□ -1.46
UBR1-209	ENST00000569243	FGF10	O15520	208 aa	Predicted RBP	5.94	□□□□□ -1.46
UBR1-209	ENST00000569243	ZNF445	P59923	1031 aa		5.94	□□□□□ -1.46
UBR1-209	ENST00000569243	AXDND1	Q5T1B0	1012 aa	Predicted RBP	5.94	□□□□□ -1.46
UBR1-209	ENST00000569243	BORA	Q6PGQ7	559 aa		5.94	□□□□□ -1.46
UBR1-209	ENST00000569243	DEF6	Q9H4E7	631 aa		5.94	□□□□□ -1.46
UBR1-209	ENST00000569243	MROH6	A6NGR9	719 aa		5.93	□□□□□ -1.46
UBR1-209	ENST00000569243	NPIPB8	E9PQR5	432 aa		5.93	□□□□□ -1.46

Retrieved 100 of 20,778 RNA–protein pairs in 37 ms