RNA–Protein interactions for RNA: ENST00000569136.5

CAPN3-219, Transcript of calpain 3, humanhuman

TSL 2 BASIC

Gene CAPN3, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-219ENST00000569136 ERVK-9P63128 1117 aa10.84□□□□□ -0.67
CAPN3-219ENST00000569136 ERVK-24P63145 666 aa10.84□□□□□ -0.67
CAPN3-219ENST00000569136 KLRC3Q07444 240 aa10.84□□□□□ -0.67
CAPN3-219ENST00000569136 IMMTQ16891 758 aaKnown RBP10.84□□□□□ -0.67
CAPN3-219ENST00000569136 SLC9C1Q4G0N8 1177 aa10.84□□□□□ -0.67
CAPN3-219ENST00000569136 AKNAD1Q5T1N1 836 aa10.84□□□□□ -0.67
CAPN3-219ENST00000569136 GMCL1P1Q8NEA9 526 aa10.84□□□□□ -0.67
CAPN3-219ENST00000569136 CEP95Q96GE4 821 aa10.84□□□□□ -0.67
CAPN3-219ENST00000569136 TANGO6Q9C0B7 1094 aa10.84□□□□□ -0.67
CAPN3-219ENST00000569136 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.84□□□□□ -0.67
CAPN3-219ENST00000569136 STRNO43815 780 aa10.83□□□□□ -0.68
CAPN3-219ENST00000569136 FLOT1O75955 427 aa10.83□□□□□ -0.68
CAPN3-219ENST00000569136 CTGFP29279 349 aa10.83□□□□□ -0.68
CAPN3-219ENST00000569136 FLT3LGP49771 235 aa10.83□□□□□ -0.68
CAPN3-219ENST00000569136 RGS19P49795 217 aa10.83□□□□□ -0.68
CAPN3-219ENST00000569136 CAP1Q01518 475 aa10.83□□□□□ -0.68
CAPN3-219ENST00000569136 BMP2KLQ5H9B9 411 aa10.83□□□□□ -0.68
CAPN3-219ENST00000569136 FAM47AQ5JRC9 791 aa10.83□□□□□ -0.68
CAPN3-219ENST00000569136 KIAA1211Q6ZU35 1233 aa10.83□□□□□ -0.68
CAPN3-219ENST00000569136 SPICE1Q8N0Z3 855 aa10.83□□□□□ -0.68
CAPN3-219ENST00000569136 STAG1Q8WVM7 1258 aa10.83□□□□□ -0.68
CAPN3-219ENST00000569136 ESR2Q92731 530 aa10.83□□□□□ -0.68
CAPN3-219ENST00000569136 TXNRD2Q9NNW7 524 aa10.83□□□□□ -0.68
CAPN3-219ENST00000569136 TOMM22Q9NS69 142 aa10.83□□□□□ -0.68
CAPN3-219ENST00000569136 GJD2Q9UKL4 321 aa10.83□□□□□ -0.68
CAPN3-219ENST00000569136 ADAMTS5Q9UNA0 930 aa10.83□□□□□ -0.68
CAPN3-219ENST00000569136 DOLKQ9UPQ8 538 aa10.83□□□□□ -0.68
CAPN3-219ENST00000569136 PTCH2Q9Y6C5 1203 aa10.83□□□□□ -0.68
CAPN3-219ENST00000569136 MAST2Q6P0Q8 1798 aa10.82□□□□□ -0.68
CAPN3-219ENST00000569136 XRCC5P13010 732 aaKnown RBP10.82□□□□□ -0.68
CAPN3-219ENST00000569136 GRK4P32298 578 aa10.82□□□□□ -0.68
CAPN3-219ENST00000569136 NOVP48745 357 aa10.82□□□□□ -0.68
CAPN3-219ENST00000569136 UBXN2AP68543 259 aa10.82□□□□□ -0.68
CAPN3-219ENST00000569136 PRKCZQ05513 592 aa10.82□□□□□ -0.68
CAPN3-219ENST00000569136 OXLD1Q5BKU9 147 aa10.82□□□□□ -0.68
CAPN3-219ENST00000569136 KIAA1755Q5JYT7 1200 aa10.82□□□□□ -0.68
CAPN3-219ENST00000569136 RCSD1Q6JBY9 416 aa10.82□□□□□ -0.68
CAPN3-219ENST00000569136 PLEKHH3Q7Z736 793 aa10.82□□□□□ -0.68
CAPN3-219ENST00000569136 PRPF38AQ8NAV1 312 aaKnown RBP10.82□□□□□ -0.68
CAPN3-219ENST00000569136 SHCBP1Q8NEM2 672 aa10.82□□□□□ -0.68
CAPN3-219ENST00000569136 CHURC1Q8WUH1 139 aa10.82□□□□□ -0.68
CAPN3-219ENST00000569136 ITPKCQ96DU7 683 aa10.82□□□□□ -0.68
CAPN3-219ENST00000569136 PAGR1Q9BTK6 254 aa10.82□□□□□ -0.68
CAPN3-219ENST00000569136 KRT23Q9C075 422 aa10.82□□□□□ -0.68
CAPN3-219ENST00000569136 CNNM2Q9H8M5 875 aa10.82□□□□□ -0.68
CAPN3-219ENST00000569136 ZFAND3Q9H8U3 227 aa10.82□□□□□ -0.68
CAPN3-219ENST00000569136 CWC22Q9HCG8 908 aaKnown RBP10.82□□□□□ -0.68
CAPN3-219ENST00000569136 CYLDQ9NQC7 956 aa10.82□□□□□ -0.68
CAPN3-219ENST00000569136 PPP4R2Q9NY27 417 aa10.82□□□□□ -0.68
CAPN3-219ENST00000569136 BIN2Q9UBW5 565 aaPredicted RBP10.82□□□□□ -0.68
CAPN3-219ENST00000569136 FEM1BQ9UK73 627 aa10.82□□□□□ -0.68
CAPN3-219ENST00000569136 STX8Q9UNK0 236 aa10.82□□□□□ -0.68
CAPN3-219ENST00000569136 DOCK2Q92608 1830 aa10.81□□□□□ -0.68
CAPN3-219ENST00000569136 CAPN5O15484 640 aaPredicted RBP10.81□□□□□ -0.68
CAPN3-219ENST00000569136 SGSM2O43147 1006 aa10.81□□□□□ -0.68
CAPN3-219ENST00000569136 ADCY3O60266 1144 aa10.81□□□□□ -0.68
CAPN3-219ENST00000569136 PLA2G6O60733 806 aa10.81□□□□□ -0.68
CAPN3-219ENST00000569136 SLC25A27O95847 323 aa10.81□□□□□ -0.68
CAPN3-219ENST00000569136 NDUFB10O96000 172 aa10.81□□□□□ -0.68
CAPN3-219ENST00000569136 COPB2P35606 906 aa10.81□□□□□ -0.68
CAPN3-219ENST00000569136 HAND2P61296 217 aa10.81□□□□□ -0.68
CAPN3-219ENST00000569136 RRP12Q5JTH9 1297 aaKnown RBP10.81□□□□□ -0.68
CAPN3-219ENST00000569136 SLFN13Q68D06 897 aa10.81□□□□□ -0.68
CAPN3-219ENST00000569136 CASC1Q6TDU7 716 aa10.81□□□□□ -0.68
CAPN3-219ENST00000569136 IQCA1Q86XH1 822 aa10.81□□□□□ -0.68
CAPN3-219ENST00000569136 DGKHQ86XP1 1220 aa10.81□□□□□ -0.68
CAPN3-219ENST00000569136 SOCS4Q8WXH5 440 aa10.81□□□□□ -0.68
CAPN3-219ENST00000569136 GMCL1Q96IK5 515 aa10.81□□□□□ -0.68
CAPN3-219ENST00000569136 ZNF333Q96JL9 665 aa10.81□□□□□ -0.68
CAPN3-219ENST00000569136 SLF1Q9BQI6 1058 aa10.81□□□□□ -0.68
CAPN3-219ENST00000569136 MROH8Q9H579 483 aa10.81□□□□□ -0.68
CAPN3-219ENST00000569136 INCENPQ9NQS7 918 aa10.81□□□□□ -0.68
CAPN3-219ENST00000569136 IL17RBQ9NRM6 502 aa10.81□□□□□ -0.68
CAPN3-219ENST00000569136 SLC5A4Q9NY91 659 aa10.81□□□□□ -0.68
CAPN3-219ENST00000569136 PPP1R9AQ9ULJ8 1098 aa10.81□□□□□ -0.68
CAPN3-219ENST00000569136 CTDP1Q9Y5B0 961 aaPredicted RBP10.81□□□□□ -0.68
CAPN3-219ENST00000569136 IVNS1ABPQ9Y6Y0 642 aa10.81□□□□□ -0.68
CAPN3-219ENST00000569136 PLIN4Q96Q06 1357 aa10.8□□□□□ -0.68
CAPN3-219ENST00000569136 SLC15A5A6NIM6 579 aa10.8□□□□□ -0.68
CAPN3-219ENST00000569136 VWA5AO00534 786 aa10.8□□□□□ -0.68
CAPN3-219ENST00000569136 ZBED4O75132 1171 aa10.8□□□□□ -0.68
CAPN3-219ENST00000569136 CNMDO75829 334 aa10.8□□□□□ -0.68
CAPN3-219ENST00000569136 TOP1P11387 765 aaKnown RBP10.8□□□□□ -0.68
CAPN3-219ENST00000569136 BMP3P12645 472 aa10.8□□□□□ -0.68
CAPN3-219ENST00000569136 STAT3P40763 770 aa10.8□□□□□ -0.68
CAPN3-219ENST00000569136 RGS2P41220 211 aa10.8□□□□□ -0.68
CAPN3-219ENST00000569136 SLC1A4P43007 532 aa10.8□□□□□ -0.68
CAPN3-219ENST00000569136 TRDNQ13061 729 aa10.8□□□□□ -0.68
CAPN3-219ENST00000569136 TSGA10IPQ3SY00 556 aa10.8□□□□□ -0.68
CAPN3-219ENST00000569136 FAM83BQ5T0W9 1011 aa10.8□□□□□ -0.68
CAPN3-219ENST00000569136 GPR142Q7Z601 462 aa10.8□□□□□ -0.68
CAPN3-219ENST00000569136 CLEC10AQ8IUN9 316 aa10.8□□□□□ -0.68
CAPN3-219ENST00000569136 PLPP7Q8NBV4 271 aa10.8□□□□□ -0.68
CAPN3-219ENST00000569136 ANKS1AQ92625 1134 aa10.8□□□□□ -0.68
CAPN3-219ENST00000569136 CCDC97Q96F63 343 aaPredicted RBP10.8□□□□□ -0.68
CAPN3-219ENST00000569136 SPATC1LQ9H0A9 340 aa10.8□□□□□ -0.68
CAPN3-219ENST00000569136 BTBD7Q9P203 1132 aa10.8□□□□□ -0.68
CAPN3-219ENST00000569136 GABRQQ9UN88 632 aa10.8□□□□□ -0.68
CAPN3-219ENST00000569136 MYO5AQ9Y4I1 1855 aaKnown RBP10.8□□□□□ -0.68
CAPN3-219ENST00000569136 TIMP2P16035 220 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms