RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 A1CFQ9NQ94 594 aaKnown RBP10.35□□□□□ -0.75
SMG1-216ENST00000569122 RNF146Q9NTX7 359 aa10.35□□□□□ -0.75
SMG1-216ENST00000569122 SLC4A4Q9Y6R1 1079 aa10.35□□□□□ -0.75
SMG1-216ENST00000569122 SOWAHBA6NEL2 793 aa10.34□□□□□ -0.75
SMG1-216ENST00000569122 B4DLN1 442 aa10.34□□□□□ -0.75
SMG1-216ENST00000569122 PRKAB2O43741 272 aa10.34□□□□□ -0.75
SMG1-216ENST00000569122 GJB5O95377 273 aa10.34□□□□□ -0.75
SMG1-216ENST00000569122 TTLL1O95922 423 aa10.34□□□□□ -0.75
SMG1-216ENST00000569122 IFIT2P09913 472 aaKnown RBP10.34□□□□□ -0.75
SMG1-216ENST00000569122 IL9P15248 144 aa10.34□□□□□ -0.75
SMG1-216ENST00000569122 ADD2P35612 726 aa10.34□□□□□ -0.75
SMG1-216ENST00000569122 MRPL12P52815 198 aaKnown RBP10.34□□□□□ -0.75
SMG1-216ENST00000569122 WDR5P61964 334 aaKnown RBP10.34□□□□□ -0.75
SMG1-216ENST00000569122 IKQ13123 557 aaPredicted RBP10.34□□□□□ -0.75
SMG1-216ENST00000569122 UBE3CQ15386 1083 aa10.34□□□□□ -0.75
SMG1-216ENST00000569122 NBPF20Q3BBV1 942 aa10.34□□□□□ -0.75
SMG1-216ENST00000569122 SBK1Q52WX2 424 aa10.34□□□□□ -0.75
SMG1-216ENST00000569122 TIGD5Q53EQ6 642 aa10.34□□□□□ -0.75
SMG1-216ENST00000569122 CNKSR3Q6P9H4 555 aa10.34□□□□□ -0.75
SMG1-216ENST00000569122 GIMAP6Q6P9H5 292 aa10.34□□□□□ -0.75
SMG1-216ENST00000569122 NEK9Q8TD19 979 aa10.34□□□□□ -0.75
SMG1-216ENST00000569122 MORC4Q8TE76 937 aa10.34□□□□□ -0.75
SMG1-216ENST00000569122 CLUAP1Q96AJ1 413 aa10.34□□□□□ -0.75
SMG1-216ENST00000569122 SAMD11Q96NU1 681 aa10.34□□□□□ -0.75
SMG1-216ENST00000569122 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.34□□□□□ -0.75
SMG1-216ENST00000569122 WDR11Q9BZH6 1224 aa10.34□□□□□ -0.75
SMG1-216ENST00000569122 PDGFCQ9NRA1 345 aa10.34□□□□□ -0.75
SMG1-216ENST00000569122 INSL6Q9Y581 213 aa10.34□□□□□ -0.75
SMG1-216ENST00000569122 REV3LO60673 3130 aa10.33□□□□□ -0.76
SMG1-216ENST00000569122 CYP2D7A0A087X1C5 515 aa10.33□□□□□ -0.76
SMG1-216ENST00000569122 PLA2G6O60733 806 aa10.33□□□□□ -0.76
SMG1-216ENST00000569122 ARHGEF15O94989 841 aa10.33□□□□□ -0.76
SMG1-216ENST00000569122 IKBKEQ14164 716 aa10.33□□□□□ -0.76
SMG1-216ENST00000569122 ZKSCAN2Q63HK3 967 aa10.33□□□□□ -0.76
SMG1-216ENST00000569122 SLFN13Q68D06 897 aa10.33□□□□□ -0.76
SMG1-216ENST00000569122 EEPD1Q7L9B9 569 aa10.33□□□□□ -0.76
SMG1-216ENST00000569122 ADHFE1Q8IWW8 467 aa10.33□□□□□ -0.76
SMG1-216ENST00000569122 FBXO16Q8IX29 292 aaPredicted RBP10.33□□□□□ -0.76
SMG1-216ENST00000569122 TMEM57Q8N5G2 664 aa10.33□□□□□ -0.76
SMG1-216ENST00000569122 FBXO22Q8NEZ5 403 aa10.33□□□□□ -0.76
SMG1-216ENST00000569122 OR6J1Q8NGC5 347 aa10.33□□□□□ -0.76
SMG1-216ENST00000569122 STAG1Q8WVM7 1258 aa10.33□□□□□ -0.76
SMG1-216ENST00000569122 MRPL38Q96DV4 380 aaKnown RBP10.33□□□□□ -0.76
SMG1-216ENST00000569122 PAG1Q9NWQ8 432 aa10.33□□□□□ -0.76
SMG1-216ENST00000569122 CYP39A1Q9NYL5 469 aa10.33□□□□□ -0.76
SMG1-216ENST00000569122 PNMA2Q9UL42 364 aa10.33□□□□□ -0.76
SMG1-216ENST00000569122 ISY1Q9ULR0 285 aaKnown RBP10.33□□□□□ -0.76
SMG1-216ENST00000569122 LRRC37A2A6NM11 1700 aa10.33□□□□□ -0.76
SMG1-216ENST00000569122 ZBED9Q6R2W3 1325 aa10.33□□□□□ -0.76
SMG1-216ENST00000569122 TMEM232C9JQI7 657 aa10.32□□□□□ -0.76
SMG1-216ENST00000569122 ALAS1P13196 640 aa10.32□□□□□ -0.76
SMG1-216ENST00000569122 SELPP16109 830 aa10.32□□□□□ -0.76
SMG1-216ENST00000569122 RASA1P20936 1047 aa10.32□□□□□ -0.76
SMG1-216ENST00000569122 SLC1A4P43007 532 aa10.32□□□□□ -0.76
SMG1-216ENST00000569122 PTGISQ16647 500 aa10.32□□□□□ -0.76
SMG1-216ENST00000569122 HFE2Q6ZVN8 426 aa10.32□□□□□ -0.76
SMG1-216ENST00000569122 BMP8AQ7Z5Y6 402 aa10.32□□□□□ -0.76
SMG1-216ENST00000569122 FTSJ3Q8IY81 847 aaKnown RBP10.32□□□□□ -0.76
SMG1-216ENST00000569122 LRRC47Q8N1G4 583 aaKnown RBP10.32□□□□□ -0.76
SMG1-216ENST00000569122 PABPC5Q96DU9 382 aaKnown RBP10.32□□□□□ -0.76
SMG1-216ENST00000569122 KIF1BPQ96EK5 621 aa10.32□□□□□ -0.76
SMG1-216ENST00000569122 GMCL1Q96IK5 515 aa10.32□□□□□ -0.76
SMG1-216ENST00000569122 MTMR4Q9NYA4 1195 aa10.32□□□□□ -0.76
SMG1-216ENST00000569122 MTUS1Q9ULD2 1270 aa10.32□□□□□ -0.76
SMG1-216ENST00000569122 CDK5RAP2Q96SN8 1893 aa10.32□□□□□ -0.76
SMG1-216ENST00000569122 ZNFX1Q9P2E3 1918 aaKnown RBP10.31□□□□□ -0.76
SMG1-216ENST00000569122 RBM47A0AV96 593 aaKnown RBP10.31□□□□□ -0.76
SMG1-216ENST00000569122 LCHNA4D1U4 455 aa10.31□□□□□ -0.76
SMG1-216ENST00000569122 LINC01553A4QN01 128 aa10.31□□□□□ -0.76
SMG1-216ENST00000569122 C19orf67A6NJJ6 358 aa10.31□□□□□ -0.76
SMG1-216ENST00000569122 A6NJR5 290 aa10.31□□□□□ -0.76
SMG1-216ENST00000569122 CXCL10P02778 98 aa10.31□□□□□ -0.76
SMG1-216ENST00000569122 ZP2Q05996 745 aa10.31□□□□□ -0.76
SMG1-216ENST00000569122 PPP2R5BQ15173 497 aa10.31□□□□□ -0.76
SMG1-216ENST00000569122 LRRC8DQ7L1W4 858 aa10.31□□□□□ -0.76
SMG1-216ENST00000569122 BANK1Q8NDB2 785 aa10.31□□□□□ -0.76
SMG1-216ENST00000569122 RHPN1Q8TCX5 695 aa10.31□□□□□ -0.76
SMG1-216ENST00000569122 SCFD2Q8WU76 684 aa10.31□□□□□ -0.76
SMG1-216ENST00000569122 EXOC6BQ9Y2D4 811 aa10.31□□□□□ -0.76
SMG1-216ENST00000569122 IGKV6D-41A0A0C4DH26 115 aa10.3□□□□□ -0.76
SMG1-216ENST00000569122 MINDY4BA8MYZ0 360 aa10.3□□□□□ -0.76
SMG1-216ENST00000569122 H3BQ06 376 aaPredicted RBP10.3□□□□□ -0.76
SMG1-216ENST00000569122 AMHP03971 560 aa10.3□□□□□ -0.76
SMG1-216ENST00000569122 SLC3A2P08195 630 aaKnown RBP10.3□□□□□ -0.76
SMG1-216ENST00000569122 GNAT2P19087 354 aa10.3□□□□□ -0.76
SMG1-216ENST00000569122 RBL2Q08999 1139 aa10.3□□□□□ -0.76
SMG1-216ENST00000569122 HERC4Q5GLZ8 1057 aaPredicted RBP10.3□□□□□ -0.76
SMG1-216ENST00000569122 NSMFQ6X4W1 530 aa10.3□□□□□ -0.76
SMG1-216ENST00000569122 EP400NLQ6ZTU2 488 aa10.3□□□□□ -0.76
SMG1-216ENST00000569122 SESTD1Q86VW0 696 aa10.3□□□□□ -0.76
SMG1-216ENST00000569122 SUGP1Q8IWZ8 645 aaKnown RBP10.3□□□□□ -0.76
SMG1-216ENST00000569122 CEP95Q96GE4 821 aa10.3□□□□□ -0.76
SMG1-216ENST00000569122 C1orf115Q9H7X2 142 aa10.3□□□□□ -0.76
SMG1-216ENST00000569122 IL1RAPL2Q9NP60 686 aa10.3□□□□□ -0.76
SMG1-216ENST00000569122 RAB11FIP3O75154 756 aa10.29□□□□□ -0.76
SMG1-216ENST00000569122 TSPY3P0CV98 308 aa10.29□□□□□ -0.76
SMG1-216ENST00000569122 TSPY8P0CW00 308 aa10.29□□□□□ -0.76
SMG1-216ENST00000569122 ATP5JP18859 108 aa10.29□□□□□ -0.76
SMG1-216ENST00000569122 ALDH5A1P51649 535 aaPredicted RBP10.29□□□□□ -0.76
SMG1-216ENST00000569122 DEFB103AP81534 67 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms