RNA–Protein interactions for RNA: ENST00000568886.5

VAC14-211, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 1 (best)

Gene VAC14, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-211ENST00000568886 ZNF396Q96N95 335 aaPredicted RBP17.59■□□□□ 0.41
VAC14-211ENST00000568886 RNF26Q9BY78 433 aaPredicted RBP17.59■□□□□ 0.41
VAC14-211ENST00000568886 NCOA5Q9HCD5 579 aaKnown RBP17.59■□□□□ 0.41
VAC14-211ENST00000568886 ZBTB5O15062 677 aa17.59■□□□□ 0.41
VAC14-211ENST00000568886 BCRP11274 1271 aa17.59■□□□□ 0.41
VAC14-211ENST00000568886 C17orf99Q6UX52 265 aa17.59■□□□□ 0.41
VAC14-211ENST00000568886 RRP36Q96EU6 259 aaKnown RBP17.59■□□□□ 0.41
VAC14-211ENST00000568886 CCDC94Q9BW85 323 aaPredicted RBP17.59■□□□□ 0.41
VAC14-211ENST00000568886 RBPJLQ9UBG7 517 aa17.59■□□□□ 0.41
VAC14-211ENST00000568886 STK36Q9NRP7 1315 aa17.58■□□□□ 0.41
VAC14-211ENST00000568886 PRPF3O43395 683 aaKnown RBP17.58■□□□□ 0.4
VAC14-211ENST00000568886 CNMDO75829 334 aa17.58■□□□□ 0.4
VAC14-211ENST00000568886 COPB2P35606 906 aa17.58■□□□□ 0.4
VAC14-211ENST00000568886 IQCB1Q15051 598 aa17.58■□□□□ 0.4
VAC14-211ENST00000568886 STX1AQ16623 288 aa17.58■□□□□ 0.4
VAC14-211ENST00000568886 POTEEQ6S8J3 1075 aa17.58■□□□□ 0.4
VAC14-211ENST00000568886 DRC7Q8IY82 874 aa17.58■□□□□ 0.4
VAC14-211ENST00000568886 CPVLQ9H3G5 476 aa17.58■□□□□ 0.4
VAC14-211ENST00000568886 WBP1LQ9NX94 342 aa17.58■□□□□ 0.4
VAC14-211ENST00000568886 ZNF214Q9UL59 606 aaPredicted RBP17.58■□□□□ 0.4
VAC14-211ENST00000568886 CTDP1Q9Y5B0 961 aaPredicted RBP17.58■□□□□ 0.4
VAC14-211ENST00000568886 PNMA6FA0A0J9YX94 578 aa17.57■□□□□ 0.4
VAC14-211ENST00000568886 hCG_1984214I3L0E3 225 aa17.57■□□□□ 0.4
VAC14-211ENST00000568886 ICAM1P05362 532 aa17.57■□□□□ 0.4
VAC14-211ENST00000568886 CDC37Q16543 378 aaPredicted RBP17.57■□□□□ 0.4
VAC14-211ENST00000568886 CCAR1Q8IX12 1150 aaKnown RBP17.57■□□□□ 0.4
VAC14-211ENST00000568886 ZNF713Q8N859 430 aaPredicted RBP17.57■□□□□ 0.4
VAC14-211ENST00000568886 ZNF536O15090 1300 aa17.57■□□□□ 0.4
VAC14-211ENST00000568886 TMEM132BQ14DG7 1078 aa17.57■□□□□ 0.4
VAC14-211ENST00000568886 TKFCQ3LXA3 575 aa17.57■□□□□ 0.4
VAC14-211ENST00000568886 CCDC73Q6ZRK6 1079 aa17.57■□□□□ 0.4
VAC14-211ENST00000568886 BEGAINQ9BUH8 593 aa17.57■□□□□ 0.4
VAC14-211ENST00000568886 TEX13BQ9BXU2 312 aa17.57■□□□□ 0.4
VAC14-211ENST00000568886 MAF1Q9H063 256 aa17.57■□□□□ 0.4
VAC14-211ENST00000568886 BTBD7Q9P203 1132 aa17.57■□□□□ 0.4
VAC14-211ENST00000568886 SEC63Q9UGP8 760 aaKnown RBP17.57■□□□□ 0.4
VAC14-211ENST00000568886 RIOK3O14730 519 aaKnown RBP17.56■□□□□ 0.4
VAC14-211ENST00000568886 FMNL1O95466 1100 aaPredicted RBP17.56■□□□□ 0.4
VAC14-211ENST00000568886 ERVK-9P63128 1117 aa17.56■□□□□ 0.4
VAC14-211ENST00000568886 ERVK-24P63145 666 aa17.56■□□□□ 0.4
VAC14-211ENST00000568886 CCNA1P78396 465 aa17.56■□□□□ 0.4
VAC14-211ENST00000568886 QRICH1Q2TAL8 776 aa17.56■□□□□ 0.4
VAC14-211ENST00000568886 TRIM22Q8IYM9 498 aa17.56■□□□□ 0.4
VAC14-211ENST00000568886 SHCBP1Q8NEM2 672 aa17.56■□□□□ 0.4
VAC14-211ENST00000568886 GPRC5AQ8NFJ5 357 aa17.56■□□□□ 0.4
VAC14-211ENST00000568886 TSC1Q92574 1164 aa17.56■□□□□ 0.4
VAC14-211ENST00000568886 USP28Q96RU2 1077 aa17.56■□□□□ 0.4
VAC14-211ENST00000568886 PIGSQ96S52 555 aa17.56■□□□□ 0.4
VAC14-211ENST00000568886 SPATC1LQ9H0A9 340 aa17.56■□□□□ 0.4
VAC14-211ENST00000568886 GOLGA6L19H0YKK7 550 aa17.56■□□□□ 0.4
VAC14-211ENST00000568886 CTIFO43310 598 aaKnown RBP17.56■□□□□ 0.4
VAC14-211ENST00000568886 FAM160A1Q05DH4 1040 aa17.56■□□□□ 0.4
VAC14-211ENST00000568886 LRMPQ12912 555 aa17.56■□□□□ 0.4
VAC14-211ENST00000568886 SNW1Q13573 536 aaKnown RBP17.56■□□□□ 0.4
VAC14-211ENST00000568886 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.56■□□□□ 0.4
VAC14-211ENST00000568886 RIOX2Q8IUF8 465 aa17.56■□□□□ 0.4
VAC14-211ENST00000568886 FAM177A1Q8N128 213 aaPredicted RBP17.56■□□□□ 0.4
VAC14-211ENST00000568886 ENGASEQ8NFI3 743 aa17.56■□□□□ 0.4
VAC14-211ENST00000568886 MRFAP1L1Q96HT8 127 aa17.56■□□□□ 0.4
VAC14-211ENST00000568886 GOLPH3LQ9H4A5 285 aa17.56■□□□□ 0.4
VAC14-211ENST00000568886 TXNRD2Q9NNW7 524 aa17.56■□□□□ 0.4
VAC14-211ENST00000568886 NRBP1Q9UHY1 535 aa17.56■□□□□ 0.4
VAC14-211ENST00000568886 TRPA1O75762 1119 aa17.55■□□□□ 0.4
VAC14-211ENST00000568886 SLC25A27O95847 323 aa17.55■□□□□ 0.4
VAC14-211ENST00000568886 STAT3P40763 770 aa17.55■□□□□ 0.4
VAC14-211ENST00000568886 CEBPZQ03701 1054 aaKnown RBP17.55■□□□□ 0.4
VAC14-211ENST00000568886 SSRP1Q08945 709 aaKnown RBP17.55■□□□□ 0.4
VAC14-211ENST00000568886 CMTR1Q8N1G2 835 aaKnown RBP17.55■□□□□ 0.4
VAC14-211ENST00000568886 AMNQ9BXJ7 453 aa17.55■□□□□ 0.4
VAC14-211ENST00000568886 VAT1LQ9HCJ6 419 aa17.55■□□□□ 0.4
VAC14-211ENST00000568886 KINO60870 393 aaKnown RBP17.55■□□□□ 0.4
VAC14-211ENST00000568886 AKAP17AQ02040 695 aaKnown RBP17.55■□□□□ 0.4
VAC14-211ENST00000568886 SAMD1Q6SPF0 538 aaPredicted RBP17.55■□□□□ 0.4
VAC14-211ENST00000568886 C11orf57Q6ZUT1 292 aaPredicted RBP17.55■□□□□ 0.4
VAC14-211ENST00000568886 FBXO11Q86XK2 927 aa17.55■□□□□ 0.4
VAC14-211ENST00000568886 TEX2Q8IWB9 1127 aa17.55■□□□□ 0.4
VAC14-211ENST00000568886 ANKRD13CQ8N6S4 541 aa17.55■□□□□ 0.4
VAC14-211ENST00000568886 PAGR1Q9BTK6 254 aa17.55■□□□□ 0.4
VAC14-211ENST00000568886 FTOQ9C0B1 505 aaKnown RBP eCLIP17.55■□□□□ 0.4
VAC14-211ENST00000568886 V9GY48 417 aaPredicted RBP17.55■□□□□ 0.4
VAC14-211ENST00000568886 COL11A1P12107 1806 aaPredicted RBP17.54■□□□□ 0.4
VAC14-211ENST00000568886 DEXIO95424 95 aa17.54■□□□□ 0.4
VAC14-211ENST00000568886 PFKFB3Q16875 520 aaPredicted RBP17.54■□□□□ 0.4
VAC14-211ENST00000568886 CPA4Q9UI42 421 aa17.54■□□□□ 0.4
VAC14-211ENST00000568886 ABCB11O95342 1321 aa17.54■□□□□ 0.4
VAC14-211ENST00000568886 NEMFO60524 1076 aa17.53■□□□□ 0.4
VAC14-211ENST00000568886 HOMER1Q86YM7 354 aa17.53■□□□□ 0.4
VAC14-211ENST00000568886 CCDC82Q8N4S0 544 aa17.53■□□□□ 0.4
VAC14-211ENST00000568886 CHST13Q8NET6 341 aa17.53■□□□□ 0.4
VAC14-211ENST00000568886 PHKBQ93100 1093 aa17.53■□□□□ 0.4
VAC14-211ENST00000568886 SLC26A6Q9BXS9 759 aa17.53■□□□□ 0.4
VAC14-211ENST00000568886 MROH8Q9H579 483 aa17.53■□□□□ 0.4
VAC14-211ENST00000568886 RAVER2Q9HCJ3 691 aaKnown RBP17.53■□□□□ 0.4
VAC14-211ENST00000568886 CCPG1Q9ULG6 757 aa17.53■□□□□ 0.4
VAC14-211ENST00000568886 SNRNP48Q6IEG0 339 aaKnown RBP17.53■□□□□ 0.4
VAC14-211ENST00000568886 PPP1R18Q6NYC8 613 aa17.53■□□□□ 0.4
VAC14-211ENST00000568886 CCDC174Q6PII3 467 aa17.53■□□□□ 0.4
VAC14-211ENST00000568886 SMAP1Q8IYB5 467 aaPredicted RBP17.53■□□□□ 0.4
VAC14-211ENST00000568886 CACTINQ8WUQ7 758 aaKnown RBP17.53■□□□□ 0.4
VAC14-211ENST00000568886 WASF1Q92558 559 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms