RNA–Protein interactions for RNA: ENST00000568301.1

COMMD4-223, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 666 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-223ENST00000568301 TOP1P11387 765 aaKnown RBP17.75■□□□□ 0.43
COMMD4-223ENST00000568301 MRPS5P82675 430 aaKnown RBP17.75■□□□□ 0.43
COMMD4-223ENST00000568301 ITGA7Q13683 1181 aa17.75■□□□□ 0.43
COMMD4-223ENST00000568301 PWP2Q15269 919 aaKnown RBP17.75■□□□□ 0.43
COMMD4-223ENST00000568301 CCDC96Q2M329 555 aa17.75■□□□□ 0.43
COMMD4-223ENST00000568301 MCMDC2Q4G0Z9 681 aa17.75■□□□□ 0.43
COMMD4-223ENST00000568301 NSMFQ6X4W1 530 aa17.75■□□□□ 0.43
COMMD4-223ENST00000568301 ADAMTS19Q8TE59 1207 aa17.75■□□□□ 0.43
COMMD4-223ENST00000568301 TRPV6Q9H1D0 765 aa17.75■□□□□ 0.43
COMMD4-223ENST00000568301 SLC28A3Q9HAS3 691 aa17.75■□□□□ 0.43
COMMD4-223ENST00000568301 PDGFCQ9NRA1 345 aa17.75■□□□□ 0.43
COMMD4-223ENST00000568301 ADD3Q9UEY8 706 aaKnown RBP17.75■□□□□ 0.43
COMMD4-223ENST00000568301 PNMA2Q9UL42 364 aa17.75■□□□□ 0.43
COMMD4-223ENST00000568301 LRRC37A2A6NM11 1700 aa17.75■□□□□ 0.43
COMMD4-223ENST00000568301 RABGGTBP53611 331 aa17.74■□□□□ 0.43
COMMD4-223ENST00000568301 HDAC1Q13547 482 aaPredicted RBP17.74■□□□□ 0.43
COMMD4-223ENST00000568301 TMEM63BQ5T3F8 832 aa17.74■□□□□ 0.43
COMMD4-223ENST00000568301 TTBK2Q6IQ55 1244 aa17.74■□□□□ 0.43
COMMD4-223ENST00000568301 EEPD1Q7L9B9 569 aa17.74■□□□□ 0.43
COMMD4-223ENST00000568301 RASGRP2Q7LDG7 609 aa17.74■□□□□ 0.43
COMMD4-223ENST00000568301 TMEM47Q9BQJ4 181 aa17.74■□□□□ 0.43
COMMD4-223ENST00000568301 MTIF3Q9H2K0 278 aaKnown RBP17.74■□□□□ 0.43
COMMD4-223ENST00000568301 MTMR7Q9Y216 660 aa17.74■□□□□ 0.43
COMMD4-223ENST00000568301 ZMYM6O95789 1325 aa17.73■□□□□ 0.43
COMMD4-223ENST00000568301 B4GALT4O60513 344 aa17.73■□□□□ 0.43
COMMD4-223ENST00000568301 PCP11498 1178 aaKnown RBP17.73■□□□□ 0.43
COMMD4-223ENST00000568301 SLC16A2P36021 539 aa17.73■□□□□ 0.43
COMMD4-223ENST00000568301 RRP1P56182 461 aaKnown RBP17.73■□□□□ 0.43
COMMD4-223ENST00000568301 BAATQ14032 418 aaPredicted RBP17.73■□□□□ 0.43
COMMD4-223ENST00000568301 DUSP28Q4G0W2 176 aa17.73■□□□□ 0.43
COMMD4-223ENST00000568301 SYDE2Q5VT97 1194 aa17.73■□□□□ 0.43
COMMD4-223ENST00000568301 KIAA1211Q6ZU35 1233 aa17.73■□□□□ 0.43
COMMD4-223ENST00000568301 FBXO16Q8IX29 292 aaPredicted RBP17.73■□□□□ 0.43
COMMD4-223ENST00000568301 VWCEQ96DN2 955 aa17.73■□□□□ 0.43
COMMD4-223ENST00000568301 TTC14Q96N46 770 aa17.73■□□□□ 0.43
COMMD4-223ENST00000568301 UHRF1Q96T88 793 aaPredicted RBP17.73■□□□□ 0.43
COMMD4-223ENST00000568301 NOC4LQ9BVI4 516 aaKnown RBP17.73■□□□□ 0.43
COMMD4-223ENST00000568301 WNT8AQ9H1J5 351 aa17.73■□□□□ 0.43
COMMD4-223ENST00000568301 TOMM22Q9NS69 142 aa17.73■□□□□ 0.43
COMMD4-223ENST00000568301 HSPD1P10809 573 aaKnown RBP17.72■□□□□ 0.43
COMMD4-223ENST00000568301 MYOGP15173 224 aa17.72■□□□□ 0.43
COMMD4-223ENST00000568301 PSMC6P62333 389 aa17.72■□□□□ 0.43
COMMD4-223ENST00000568301 FAM227BQ96M60 508 aa17.72■□□□□ 0.43
COMMD4-223ENST00000568301 PURBQ96QR8 312 aaKnown RBP17.72■□□□□ 0.43
COMMD4-223ENST00000568301 TCF20Q9UGU0 1960 aaKnown RBP17.71■□□□□ 0.43
COMMD4-223ENST00000568301 A0A0D9SFI3 127 aa17.71■□□□□ 0.43
COMMD4-223ENST00000568301 RBM47A0AV96 593 aaKnown RBP17.71■□□□□ 0.43
COMMD4-223ENST00000568301 ALDH5A1P51649 535 aaPredicted RBP17.71■□□□□ 0.43
COMMD4-223ENST00000568301 RRP12Q5JTH9 1297 aaKnown RBP17.71■□□□□ 0.43
COMMD4-223ENST00000568301 SCLYQ96I15 445 aa17.71■□□□□ 0.43
COMMD4-223ENST00000568301 GPCPD1Q9NPB8 672 aa17.71■□□□□ 0.43
COMMD4-223ENST00000568301 NFIBO00712 420 aa17.7■□□□□ 0.42
COMMD4-223ENST00000568301 PDHBP11177 359 aa17.7■□□□□ 0.42
COMMD4-223ENST00000568301 MFSD6Q6ZSS7 791 aa17.7■□□□□ 0.42
COMMD4-223ENST00000568301 CRBNQ96SW2 442 aa17.7■□□□□ 0.42
COMMD4-223ENST00000568301 WDR11Q9BZH6 1224 aa17.7■□□□□ 0.42
COMMD4-223ENST00000568301 POLR3EQ9NVU0 708 aa17.7■□□□□ 0.42
COMMD4-223ENST00000568301 SLC4A7Q9Y6M7 1214 aa17.7■□□□□ 0.42
COMMD4-223ENST00000568301 FRMPD2Q68DX3 1309 aaPredicted RBP17.7■□□□□ 0.42
COMMD4-223ENST00000568301 PTPDC1A2A3K4 754 aa17.69■□□□□ 0.42
COMMD4-223ENST00000568301 SNHG28P0DPA3 235 aa17.69■□□□□ 0.42
COMMD4-223ENST00000568301 ZNF543Q08ER8 600 aa17.69■□□□□ 0.42
COMMD4-223ENST00000568301 PPP2R2DQ66LE6 453 aa17.69■□□□□ 0.42
COMMD4-223ENST00000568301 RNF207Q6ZRF8 634 aa17.69■□□□□ 0.42
COMMD4-223ENST00000568301 RPUSD2Q8IZ73 545 aaKnown RBP17.69■□□□□ 0.42
COMMD4-223ENST00000568301 MICALL1Q8N3F8 863 aa17.69■□□□□ 0.42
COMMD4-223ENST00000568301 IL27Q8NEV9 243 aa17.69■□□□□ 0.42
COMMD4-223ENST00000568301 CLEC4DQ8WXI8 215 aa17.69■□□□□ 0.42
COMMD4-223ENST00000568301 NECAB3Q96P71 396 aaPredicted RBP17.69■□□□□ 0.42
COMMD4-223ENST00000568301 MPHOSPH6Q99547 160 aaKnown RBP17.69■□□□□ 0.42
COMMD4-223ENST00000568301 ALDH8A1Q9H2A2 487 aaPredicted RBP17.69■□□□□ 0.42
COMMD4-223ENST00000568301 WDR19Q8NEZ3 1342 aa17.69■□□□□ 0.42
COMMD4-223ENST00000568301 ZBBXA8MT70 800 aa17.68■□□□□ 0.42
COMMD4-223ENST00000568301 SUPT20HL2P0C7V6 817 aa17.68■□□□□ 0.42
COMMD4-223ENST00000568301 NT5C2P49902 561 aa17.68■□□□□ 0.42
COMMD4-223ENST00000568301 CPT1AP50416 773 aa17.68■□□□□ 0.42
COMMD4-223ENST00000568301 MFAP1P55081 439 aaKnown RBP17.68■□□□□ 0.42
COMMD4-223ENST00000568301 TFF2Q03403 129 aa17.68■□□□□ 0.42
COMMD4-223ENST00000568301 NMIQ13287 307 aaPredicted RBP17.68■□□□□ 0.42
COMMD4-223ENST00000568301 AAMPQ13685 434 aa17.68■□□□□ 0.42
COMMD4-223ENST00000568301 TTLL4Q14679 1199 aa17.68■□□□□ 0.42
COMMD4-223ENST00000568301 ZNF589Q86UQ0 364 aaPredicted RBP17.68■□□□□ 0.42
COMMD4-223ENST00000568301 DNERQ8NFT8 737 aa17.68■□□□□ 0.42
COMMD4-223ENST00000568301 RNF41Q9H4P4 317 aaPredicted RBP17.68■□□□□ 0.42
COMMD4-223ENST00000568301 TRMT13Q9NUP7 481 aaKnown RBP17.68■□□□□ 0.42
COMMD4-223ENST00000568301 PCDHA11Q9Y5I1 949 aa17.68■□□□□ 0.42
COMMD4-223ENST00000568301 CCDC171Q6TFL3 1326 aa17.68■□□□□ 0.42
COMMD4-223ENST00000568301 NKRFO15226 690 aaKnown RBP eCLIP17.67■□□□□ 0.42
COMMD4-223ENST00000568301 CYP2C9P11712 490 aa17.67■□□□□ 0.42
COMMD4-223ENST00000568301 BMP1P13497 986 aa17.67■□□□□ 0.42
COMMD4-223ENST00000568301 ATP2A2P16615 1042 aaKnown RBP17.67■□□□□ 0.42
COMMD4-223ENST00000568301 CALML3P27482 149 aa17.67■□□□□ 0.42
COMMD4-223ENST00000568301 HAND2P61296 217 aa17.67■□□□□ 0.42
COMMD4-223ENST00000568301 RPS6P62753 249 aaKnown RBP17.67■□□□□ 0.42
COMMD4-223ENST00000568301 PURAQ00577 322 aaKnown RBP17.67■□□□□ 0.42
COMMD4-223ENST00000568301 BRDTQ58F21 947 aaPredicted RBP17.67■□□□□ 0.42
COMMD4-223ENST00000568301 GPATCH4Q5T3I0 446 aaKnown RBP17.67■□□□□ 0.42
COMMD4-223ENST00000568301 RGS22Q8NE09 1264 aa17.67■□□□□ 0.42
COMMD4-223ENST00000568301 MAF1Q9H063 256 aa17.67■□□□□ 0.42
COMMD4-223ENST00000568301 SCN5AQ14524 2016 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms