RNA–Protein interactions for RNA: ENST00000568038.1

SMG1-214, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-214ENST00000568038 CERS3Q8IU89 383 aa9.22□□□□□ -0.93
SMG1-214ENST00000568038 MAPKAPK5Q8IW41 473 aa9.22□□□□□ -0.93
SMG1-214ENST00000568038 MICALL1Q8N3F8 863 aa9.22□□□□□ -0.93
SMG1-214ENST00000568038 PNMA5Q96PV4 448 aa9.22□□□□□ -0.93
SMG1-214ENST00000568038 TAF1DQ9H5J8 278 aaPredicted RBP9.22□□□□□ -0.93
SMG1-214ENST00000568038 NMRK2Q9NPI5 230 aa9.22□□□□□ -0.93
SMG1-214ENST00000568038 GOLGB1Q14789 3259 aaKnown RBP9.22□□□□□ -0.93
SMG1-214ENST00000568038 LOC100996750A0A140TA64 210 aa9.21□□□□□ -0.94
SMG1-214ENST00000568038 FAM229AH3BQW9 127 aa9.21□□□□□ -0.94
SMG1-214ENST00000568038 REC8O95072 547 aa9.21□□□□□ -0.94
SMG1-214ENST00000568038 TDO2P48775 406 aa9.21□□□□□ -0.94
SMG1-214ENST00000568038 NFIAQ12857 509 aa9.21□□□□□ -0.94
SMG1-214ENST00000568038 DGKZQ13574 1117 aa9.21□□□□□ -0.94
SMG1-214ENST00000568038 SLC4A8Q2Y0W8 1093 aa9.21□□□□□ -0.94
SMG1-214ENST00000568038 ANGEL2Q5VTE6 544 aaKnown RBP9.21□□□□□ -0.94
SMG1-214ENST00000568038 USP50Q70EL3 339 aaPredicted RBP9.21□□□□□ -0.94
SMG1-214ENST00000568038 IFNL3Q8IZI9 196 aa9.21□□□□□ -0.94
SMG1-214ENST00000568038 KRTAP4-6Q9BYQ5 205 aa9.21□□□□□ -0.94
SMG1-214ENST00000568038 NACAP1Q9BZK3 213 aa9.21□□□□□ -0.94
SMG1-214ENST00000568038 LSG1Q9H089 658 aaKnown RBP9.21□□□□□ -0.94
SMG1-214ENST00000568038 EPB41L4AQ9HCS5 686 aaPredicted RBP9.21□□□□□ -0.94
SMG1-214ENST00000568038 DDX4Q9NQI0 724 aaKnown RBP9.21□□□□□ -0.94
SMG1-214ENST00000568038 MCM9Q9NXL9 1143 aa9.21□□□□□ -0.94
SMG1-214ENST00000568038 GGA3Q9NZ52 723 aa9.21□□□□□ -0.94
SMG1-214ENST00000568038 SAP30BPQ9UHR5 308 aaKnown RBP9.21□□□□□ -0.94
SMG1-214ENST00000568038 WDR90Q96KV7 1748 aa9.21□□□□□ -0.94
SMG1-214ENST00000568038 TGFBR3LH3BV60 316 aa9.2□□□□□ -0.94
SMG1-214ENST00000568038 FOXP2O15409 715 aa9.2□□□□□ -0.94
SMG1-214ENST00000568038 YY1P25490 414 aa9.2□□□□□ -0.94
SMG1-214ENST00000568038 PRRT3Q5FWE3 981 aa9.2□□□□□ -0.94
SMG1-214ENST00000568038 PNMA8AQ86V59 439 aaPredicted RBP9.2□□□□□ -0.94
SMG1-214ENST00000568038 ZSCAN29Q8IWY8 852 aaPredicted RBP9.2□□□□□ -0.94
SMG1-214ENST00000568038 ZFPM1Q8IX07 1006 aa9.2□□□□□ -0.94
SMG1-214ENST00000568038 DCPSQ96C86 337 aaKnown RBP9.2□□□□□ -0.94
SMG1-214ENST00000568038 DSCC1Q9BVC3 393 aa9.2□□□□□ -0.94
SMG1-214ENST00000568038 IDI2Q9BXS1 227 aa9.2□□□□□ -0.94
SMG1-214ENST00000568038 BACH2Q9BYV9 841 aa9.2□□□□□ -0.94
SMG1-214ENST00000568038 NAPBQ9H115 298 aa9.2□□□□□ -0.94
SMG1-214ENST00000568038 DCP1AQ9NPI6 582 aaPredicted RBP9.2□□□□□ -0.94
SMG1-214ENST00000568038 ATP8A2Q9NTI2 1148 aa9.2□□□□□ -0.94
SMG1-214ENST00000568038 NOVA2Q9UNW9 492 aaKnown RBP9.2□□□□□ -0.94
SMG1-214ENST00000568038 FLT1P17948 1338 aa9.2□□□□□ -0.94
SMG1-214ENST00000568038 SCN4AP35499 1836 aa9.19□□□□□ -0.94
SMG1-214ENST00000568038 CYP2D7A0A087X1C5 515 aa9.19□□□□□ -0.94
SMG1-214ENST00000568038 SPDYE3A6NKU9 549 aa9.19□□□□□ -0.94
SMG1-214ENST00000568038 MINDY4BA8MYZ0 360 aa9.19□□□□□ -0.94
SMG1-214ENST00000568038 FGAP02671 866 aa9.19□□□□□ -0.94
SMG1-214ENST00000568038 POLR3DP05423 398 aaPredicted RBP9.19□□□□□ -0.94
SMG1-214ENST00000568038 SPATA31C1P0DKV0 1188 aa9.19□□□□□ -0.94
SMG1-214ENST00000568038 CYP2D6P10635 497 aa9.19□□□□□ -0.94
SMG1-214ENST00000568038 NFKB1P19838 968 aa9.19□□□□□ -0.94
SMG1-214ENST00000568038 WEE1P30291 646 aa9.19□□□□□ -0.94
SMG1-214ENST00000568038 IDH3AP50213 366 aa9.19□□□□□ -0.94
SMG1-214ENST00000568038 CCINQ13939 588 aa9.19□□□□□ -0.94
SMG1-214ENST00000568038 RASA3Q14644 834 aa9.19□□□□□ -0.94
SMG1-214ENST00000568038 IER5Q5VY09 327 aa9.19□□□□□ -0.94
SMG1-214ENST00000568038 GIMAP6Q6P9H5 292 aa9.19□□□□□ -0.94
SMG1-214ENST00000568038 CTR9Q6PD62 1173 aa9.19□□□□□ -0.94
SMG1-214ENST00000568038 KRT25Q7Z3Z0 450 aa9.19□□□□□ -0.94
SMG1-214ENST00000568038 STK11IPQ8N1F8 1099 aa9.19□□□□□ -0.94
SMG1-214ENST00000568038 MAP4K1Q92918 833 aa9.19□□□□□ -0.94
SMG1-214ENST00000568038 PRIMPOLQ96LW4 560 aa9.19□□□□□ -0.94
SMG1-214ENST00000568038 USP26Q9BXU7 913 aa9.19□□□□□ -0.94
SMG1-214ENST00000568038 GSX2Q9BZM3 304 aa9.19□□□□□ -0.94
SMG1-214ENST00000568038 TMEM39BQ9GZU3 492 aa9.19□□□□□ -0.94
SMG1-214ENST00000568038 OSBPL5Q9H0X9 879 aaPredicted RBP9.19□□□□□ -0.94
SMG1-214ENST00000568038 PALD1Q9ULE6 856 aa9.19□□□□□ -0.94
SMG1-214ENST00000568038 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.19□□□□□ -0.94
SMG1-214ENST00000568038 RBM8AQ9Y5S9 174 aaKnown RBP9.19□□□□□ -0.94
SMG1-214ENST00000568038 RPAP1Q9BWH6 1393 aaPredicted RBP9.19□□□□□ -0.94
SMG1-214ENST00000568038 DDTLA6NHG4 134 aaPredicted RBP9.18□□□□□ -0.94
SMG1-214ENST00000568038 SMIM22K7EJ46 135 aa9.18□□□□□ -0.94
SMG1-214ENST00000568038 K7ELQ4 463 aaPredicted RBP9.18□□□□□ -0.94
SMG1-214ENST00000568038 EIF5BO60841 1220 aaKnown RBP9.18□□□□□ -0.94
SMG1-214ENST00000568038 ENTPD3O75355 529 aa9.18□□□□□ -0.94
SMG1-214ENST00000568038 TNNI2P48788 182 aa9.18□□□□□ -0.94
SMG1-214ENST00000568038 HAND2P61296 217 aa9.18□□□□□ -0.94
SMG1-214ENST00000568038 CNTNAP1P78357 1384 aa9.18□□□□□ -0.94
SMG1-214ENST00000568038 TNFAIP1Q13829 316 aa9.18□□□□□ -0.94
SMG1-214ENST00000568038 ALX1Q15699 326 aa9.18□□□□□ -0.94
SMG1-214ENST00000568038 FKBP1CQ5VVH2 108 aa9.18□□□□□ -0.94
SMG1-214ENST00000568038 PRAMEF18Q5VWM3 479 aa9.18□□□□□ -0.94
SMG1-214ENST00000568038 ECM29Q5VYK3 1845 aa9.18□□□□□ -0.94
SMG1-214ENST00000568038 USP48Q86UV5 1035 aa9.18□□□□□ -0.94
SMG1-214ENST00000568038 APOBEC3FQ8IUX4 373 aaKnown RBP9.18□□□□□ -0.94
SMG1-214ENST00000568038 AMOTL1Q8IY63 956 aa9.18□□□□□ -0.94
SMG1-214ENST00000568038 NUDT8Q8WV74 236 aa9.18□□□□□ -0.94
SMG1-214ENST00000568038 FAM151AQ8WW52 585 aa9.18□□□□□ -0.94
SMG1-214ENST00000568038 DEFB129Q9H1M3 183 aa9.18□□□□□ -0.94
SMG1-214ENST00000568038 DMGDHQ9UI17 866 aaKnown RBP9.18□□□□□ -0.94
SMG1-214ENST00000568038 CTNNA3Q9UI47 895 aa9.18□□□□□ -0.94
SMG1-214ENST00000568038 BAZ2AQ9UIF9 1905 aaKnown RBP9.17□□□□□ -0.94
SMG1-214ENST00000568038 CDK5RAP2Q96SN8 1893 aa9.17□□□□□ -0.94
SMG1-214ENST00000568038 ADM5C9JUS6 153 aa9.17□□□□□ -0.94
SMG1-214ENST00000568038 ZNF213O14771 459 aa9.17□□□□□ -0.94
SMG1-214ENST00000568038 PLCD1P51178 756 aa9.17□□□□□ -0.94
SMG1-214ENST00000568038 DOC2BQ14184 412 aa9.17□□□□□ -0.94
SMG1-214ENST00000568038 C12orf60Q5U649 245 aa9.17□□□□□ -0.94
SMG1-214ENST00000568038 MAP1SQ66K74 1059 aaPredicted RBP9.17□□□□□ -0.94
SMG1-214ENST00000568038 CREB3L3Q68CJ9 461 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms