RNA–Protein interactions for RNA: ENST00000567880.5

TCF4-236, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-236ENST00000567880 ABCB11O95342 1321 aa11.91□□□□□ -0.5
TCF4-236ENST00000567880 UNCXA6NJT0 531 aa11.9□□□□□ -0.5
TCF4-236ENST00000567880 MEIS2O14770 477 aa11.9□□□□□ -0.5
TCF4-236ENST00000567880 OPLAHO14841 1288 aa11.9□□□□□ -0.5
TCF4-236ENST00000567880 TRAPPC10P48553 1259 aa11.9□□□□□ -0.5
TCF4-236ENST00000567880 CLK2P49760 499 aaKnown RBP11.9□□□□□ -0.5
TCF4-236ENST00000567880 SNAPC2Q13487 334 aa11.9□□□□□ -0.5
TCF4-236ENST00000567880 LETM2Q2VYF4 491 aa11.9□□□□□ -0.5
TCF4-236ENST00000567880 PCDHA7Q9UN72 937 aa11.9□□□□□ -0.5
TCF4-236ENST00000567880 CEP131Q9UPN4 1083 aa11.9□□□□□ -0.5
TCF4-236ENST00000567880 MRPL11Q9Y3B7 192 aaKnown RBP11.9□□□□□ -0.5
TCF4-236ENST00000567880 MRVI1Q9Y6F6 885 aa11.9□□□□□ -0.5
TCF4-236ENST00000567880 SPDYE16A6NNV3 312 aaPredicted RBP11.9□□□□□ -0.51
TCF4-236ENST00000567880 MBD3O95983 291 aa11.9□□□□□ -0.51
TCF4-236ENST00000567880 HUNKP57058 714 aa11.9□□□□□ -0.51
TCF4-236ENST00000567880 IRX3P78415 501 aaPredicted RBP11.9□□□□□ -0.51
TCF4-236ENST00000567880 PLS1Q14651 629 aa11.9□□□□□ -0.51
TCF4-236ENST00000567880 KLHL40Q2TBA0 621 aa11.9□□□□□ -0.51
TCF4-236ENST00000567880 NEK8Q86SG6 692 aa11.9□□□□□ -0.51
TCF4-236ENST00000567880 FCHSD1Q86WN1 690 aa11.9□□□□□ -0.51
TCF4-236ENST00000567880 TBC1D5Q92609 795 aa11.9□□□□□ -0.51
TCF4-236ENST00000567880 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.9□□□□□ -0.51
TCF4-236ENST00000567880 RYDENQ9NUL5 291 aaKnown RBP11.9□□□□□ -0.51
TCF4-236ENST00000567880 HOXC10Q9NYD6 342 aa11.9□□□□□ -0.51
TCF4-236ENST00000567880 AGTPBP1Q9UPW5 1226 aa11.9□□□□□ -0.51
TCF4-236ENST00000567880 STK24Q9Y6E0 443 aa11.9□□□□□ -0.51
TCF4-236ENST00000567880 A0A0G2JMZ2 1700 aa11.89□□□□□ -0.51
TCF4-236ENST00000567880 KIF3CO14782 793 aa11.89□□□□□ -0.51
TCF4-236ENST00000567880 CCNT1O60563 726 aaKnown RBP11.89□□□□□ -0.51
TCF4-236ENST00000567880 FDX1P10109 184 aa11.89□□□□□ -0.51
TCF4-236ENST00000567880 CAVIN1Q6NZI2 390 aaKnown RBP11.89□□□□□ -0.51
TCF4-236ENST00000567880 FASTKD5Q7L8L6 764 aaKnown RBP11.89□□□□□ -0.51
TCF4-236ENST00000567880 FAM43AQ8N2R8 423 aa11.89□□□□□ -0.51
TCF4-236ENST00000567880 JMYQ8N9B5 988 aa11.89□□□□□ -0.51
TCF4-236ENST00000567880 SPDYE3A6NKU9 549 aa11.88□□□□□ -0.51
TCF4-236ENST00000567880 NFIBO00712 420 aa11.88□□□□□ -0.51
TCF4-236ENST00000567880 PPP6R2O75170 966 aa11.88□□□□□ -0.51
TCF4-236ENST00000567880 PTGDRQ13258 359 aa11.88□□□□□ -0.51
TCF4-236ENST00000567880 TMEM132BQ14DG7 1078 aa11.88□□□□□ -0.51
TCF4-236ENST00000567880 MUM1L1Q5H9M0 696 aa11.88□□□□□ -0.51
TCF4-236ENST00000567880 SNRNP48Q6IEG0 339 aaKnown RBP11.88□□□□□ -0.51
TCF4-236ENST00000567880 CLIC6Q96NY7 704 aa11.88□□□□□ -0.51
TCF4-236ENST00000567880 ANO3Q9BYT9 981 aa11.88□□□□□ -0.51
TCF4-236ENST00000567880 ASCC2Q9H1I8 757 aaPredicted RBP11.88□□□□□ -0.51
TCF4-236ENST00000567880 ADAMTS5Q9UNA0 930 aa11.88□□□□□ -0.51
TCF4-236ENST00000567880 MYPNQ86TC9 1320 aa11.88□□□□□ -0.51
TCF4-236ENST00000567880 GCOM1H8Y6P7 765 aaPredicted RBP11.88□□□□□ -0.51
TCF4-236ENST00000567880 PEX10O60683 326 aa11.88□□□□□ -0.51
TCF4-236ENST00000567880 POLR2MP0CAP2 368 aa11.88□□□□□ -0.51
TCF4-236ENST00000567880 HOXA7P31268 230 aaPredicted RBP11.88□□□□□ -0.51
TCF4-236ENST00000567880 AP3B2Q13367 1082 aa11.88□□□□□ -0.51
TCF4-236ENST00000567880 MOGSQ13724 837 aa11.88□□□□□ -0.51
TCF4-236ENST00000567880 CCAR1Q8IX12 1150 aaKnown RBP11.88□□□□□ -0.51
TCF4-236ENST00000567880 KRI1Q8N9T8 703 aaKnown RBP11.88□□□□□ -0.51
TCF4-236ENST00000567880 REPS2Q8NFH8 660 aa11.88□□□□□ -0.51
TCF4-236ENST00000567880 TRERF1Q96PN7 1200 aa11.88□□□□□ -0.51
TCF4-236ENST00000567880 P2RX7Q99572 595 aaKnown RBP11.88□□□□□ -0.51
TCF4-236ENST00000567880 ZNF214Q9UL59 606 aaPredicted RBP11.88□□□□□ -0.51
TCF4-236ENST00000567880 RIPK3Q9Y572 518 aa11.88□□□□□ -0.51
TCF4-236ENST00000567880 CCL15-CCL14A0A0B4J2E2 113 aa11.87□□□□□ -0.51
TCF4-236ENST00000567880 PIK3CDO00329 1044 aa11.87□□□□□ -0.51
TCF4-236ENST00000567880 BMP15O95972 392 aa11.87□□□□□ -0.51
TCF4-236ENST00000567880 CETPP11597 493 aa11.87□□□□□ -0.51
TCF4-236ENST00000567880 LIG1P18858 919 aa11.87□□□□□ -0.51
TCF4-236ENST00000567880 GTF2A2P52657 109 aa11.87□□□□□ -0.51
TCF4-236ENST00000567880 PABPC4Q13310 644 aaKnown RBP eCLIP11.87□□□□□ -0.51
TCF4-236ENST00000567880 CCL15Q16663 113 aa11.87□□□□□ -0.51
TCF4-236ENST00000567880 SPRYD7Q5W111 196 aa11.87□□□□□ -0.51
TCF4-236ENST00000567880 ADALQ6DHV7 355 aa11.87□□□□□ -0.51
TCF4-236ENST00000567880 SMC1BQ8NDV3 1235 aa11.87□□□□□ -0.51
TCF4-236ENST00000567880 CLEC4DQ8WXI8 215 aa11.87□□□□□ -0.51
TCF4-236ENST00000567880 PAGR1Q9BTK6 254 aa11.87□□□□□ -0.51
TCF4-236ENST00000567880 RNF146Q9NTX7 359 aa11.87□□□□□ -0.51
TCF4-236ENST00000567880 PASKQ96RG2 1323 aa11.87□□□□□ -0.51
TCF4-236ENST00000567880 TDP2O95551 362 aa11.86□□□□□ -0.51
TCF4-236ENST00000567880 FOSP01100 380 aaPredicted RBP11.86□□□□□ -0.51
TCF4-236ENST00000567880 OSBPP22059 807 aa11.86□□□□□ -0.51
TCF4-236ENST00000567880 ZNF157P51786 506 aaPredicted RBP11.86□□□□□ -0.51
TCF4-236ENST00000567880 OAZ1P54368 228 aa11.86□□□□□ -0.51
TCF4-236ENST00000567880 HERVK_113P62684 666 aa11.86□□□□□ -0.51
TCF4-236ENST00000567880 GRIN1Q05586 938 aa11.86□□□□□ -0.51
TCF4-236ENST00000567880 SPECC1Q5M775 1068 aa11.86□□□□□ -0.51
TCF4-236ENST00000567880 AXDND1Q5T1B0 1012 aaPredicted RBP11.86□□□□□ -0.51
TCF4-236ENST00000567880 GPAT2Q6NUI2 795 aa11.86□□□□□ -0.51
TCF4-236ENST00000567880 NSMFQ6X4W1 530 aa11.86□□□□□ -0.51
TCF4-236ENST00000567880 FSIP1Q8NA03 581 aa11.86□□□□□ -0.51
TCF4-236ENST00000567880 MS4A4AQ96JQ5 239 aa11.86□□□□□ -0.51
TCF4-236ENST00000567880 TEX13BQ9BXU2 312 aa11.86□□□□□ -0.51
TCF4-236ENST00000567880 FBXO2Q9UK22 296 aaPredicted RBP11.86□□□□□ -0.51
TCF4-236ENST00000567880 PNMA2Q9UL42 364 aa11.86□□□□□ -0.51
TCF4-236ENST00000567880 ZNFX1Q9P2E3 1918 aaKnown RBP11.86□□□□□ -0.51
TCF4-236ENST00000567880 A0A1B0GVL5 298 aa11.86□□□□□ -0.51
TCF4-236ENST00000567880 VWA3AA6NCI4 1184 aa11.86□□□□□ -0.51
TCF4-236ENST00000567880 NEMFO60524 1076 aa11.86□□□□□ -0.51
TCF4-236ENST00000567880 CUTAO60888 179 aa11.86□□□□□ -0.51
TCF4-236ENST00000567880 ZBTB48P10074 688 aaPredicted RBP11.86□□□□□ -0.51
TCF4-236ENST00000567880 STAT3P40763 770 aa11.86□□□□□ -0.51
TCF4-236ENST00000567880 ATP2C1P98194 919 aaPredicted RBP11.86□□□□□ -0.51
TCF4-236ENST00000567880 MCTP2Q6DN12 878 aa11.86□□□□□ -0.51
TCF4-236ENST00000567880 LBX2Q6XYB7 198 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms