RNA–Protein interactions for RNA: ENST00000567399.5

COMMD4-219, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-219ENST00000567399 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.49■□□□□ 0.39
COMMD4-219ENST00000567399 RBM27Q9P2N5 1060 aaKnown RBP17.49■□□□□ 0.39
COMMD4-219ENST00000567399 TPCN1Q9ULQ1 816 aa17.49■□□□□ 0.39
COMMD4-219ENST00000567399 ZNF236Q9UL36 1845 aa17.49■□□□□ 0.39
COMMD4-219ENST00000567399 DOCK3Q8IZD9 2030 aa17.48■□□□□ 0.39
COMMD4-219ENST00000567399 CNTNAP5Q8WYK1 1306 aa17.48■□□□□ 0.39
COMMD4-219ENST00000567399 SOWAHBA6NEL2 793 aa17.48■□□□□ 0.39
COMMD4-219ENST00000567399 SSRP1Q08945 709 aaKnown RBP17.48■□□□□ 0.39
COMMD4-219ENST00000567399 RABEP1Q15276 862 aa17.48■□□□□ 0.39
COMMD4-219ENST00000567399 PRAMEF19Q5SWL8 479 aa17.48■□□□□ 0.39
COMMD4-219ENST00000567399 TBC1D5Q92609 795 aa17.48■□□□□ 0.39
COMMD4-219ENST00000567399 PHKBQ93100 1093 aa17.48■□□□□ 0.39
COMMD4-219ENST00000567399 PURBQ96QR8 312 aaKnown RBP17.48■□□□□ 0.39
COMMD4-219ENST00000567399 MAF1Q9H063 256 aa17.48■□□□□ 0.39
COMMD4-219ENST00000567399 SYNGAP1Q96PV0 1343 aa17.47■□□□□ 0.39
COMMD4-219ENST00000567399 ST18O60284 1047 aa17.47■□□□□ 0.39
COMMD4-219ENST00000567399 CDKL5O76039 1030 aa17.47■□□□□ 0.39
COMMD4-219ENST00000567399 TFRCP02786 760 aaKnown RBP17.47■□□□□ 0.39
COMMD4-219ENST00000567399 CCND3P30281 292 aaPredicted RBP17.47■□□□□ 0.39
COMMD4-219ENST00000567399 NAPAP54920 295 aa17.47■□□□□ 0.39
COMMD4-219ENST00000567399 ARHGEF16Q5VV41 709 aa17.47■□□□□ 0.39
COMMD4-219ENST00000567399 ARMCX2Q7L311 632 aa17.47■□□□□ 0.39
COMMD4-219ENST00000567399 SAMD3Q8N6K7 520 aa17.47■□□□□ 0.39
COMMD4-219ENST00000567399 SMARCC2Q8TAQ2 1214 aa17.47■□□□□ 0.39
COMMD4-219ENST00000567399 GPKOWQ92917 476 aaPredicted RBP eCLIP17.47■□□□□ 0.39
COMMD4-219ENST00000567399 DEFB118Q96PH6 123 aa17.47■□□□□ 0.39
COMMD4-219ENST00000567399 MAP3K20Q9NYL2 800 aaKnown RBP17.47■□□□□ 0.39
COMMD4-219ENST00000567399 ZHX1Q9UKY1 873 aaPredicted RBP17.47■□□□□ 0.39
COMMD4-219ENST00000567399 NID2Q14112 1375 aa17.46■□□□□ 0.39
COMMD4-219ENST00000567399 PRPF3O43395 683 aaKnown RBP17.46■□□□□ 0.39
COMMD4-219ENST00000567399 PFKFB2O60825 505 aa17.46■□□□□ 0.39
COMMD4-219ENST00000567399 PPFIA3O75145 1194 aa17.46■□□□□ 0.39
COMMD4-219ENST00000567399 IFNAR1P17181 557 aa17.46■□□□□ 0.39
COMMD4-219ENST00000567399 HOXA13P31271 388 aaPredicted RBP17.46■□□□□ 0.39
COMMD4-219ENST00000567399 ALDH5A1P51649 535 aaPredicted RBP17.46■□□□□ 0.39
COMMD4-219ENST00000567399 PDE4DQ08499 809 aa17.46■□□□□ 0.39
COMMD4-219ENST00000567399 FUT2Q10981 343 aa17.46■□□□□ 0.39
COMMD4-219ENST00000567399 MAMDC4Q6UXC1 1216 aa17.46■□□□□ 0.39
COMMD4-219ENST00000567399 FCHSD1Q86WN1 690 aa17.46■□□□□ 0.39
COMMD4-219ENST00000567399 DNERQ8NFT8 737 aa17.46■□□□□ 0.39
COMMD4-219ENST00000567399 SYTL5Q8TDW5 730 aaPredicted RBP17.46■□□□□ 0.39
COMMD4-219ENST00000567399 TBC1D32Q96NH3 1257 aa17.46■□□□□ 0.39
COMMD4-219ENST00000567399 TAAR1Q96RJ0 339 aa17.46■□□□□ 0.39
COMMD4-219ENST00000567399 RMDN3Q96TC7 470 aa17.46■□□□□ 0.39
COMMD4-219ENST00000567399 PSTPIP2Q9H939 334 aa17.46■□□□□ 0.39
COMMD4-219ENST00000567399 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.46■□□□□ 0.39
COMMD4-219ENST00000567399 LIMCH1Q9UPQ0 1083 aa17.46■□□□□ 0.39
COMMD4-219ENST00000567399 ZNFX1Q9P2E3 1918 aaKnown RBP17.46■□□□□ 0.39
COMMD4-219ENST00000567399 hCG_1984214I3L0E3 225 aa17.45■□□□□ 0.38
COMMD4-219ENST00000567399 GJB1P08034 283 aa17.45■□□□□ 0.38
COMMD4-219ENST00000567399 SCG2P13521 617 aa17.45■□□□□ 0.38
COMMD4-219ENST00000567399 SCRN1Q12765 414 aa17.45■□□□□ 0.38
COMMD4-219ENST00000567399 MAP3K21Q5TCX8 1036 aa17.45■□□□□ 0.38
COMMD4-219ENST00000567399 WWC2Q6AWC2 1192 aa17.45■□□□□ 0.38
COMMD4-219ENST00000567399 ZNF713Q8N859 430 aaPredicted RBP17.45■□□□□ 0.38
COMMD4-219ENST00000567399 NSUN6Q8TEA1 469 aaKnown RBP17.45■□□□□ 0.38
COMMD4-219ENST00000567399 KIF2CQ99661 725 aa17.45■□□□□ 0.38
COMMD4-219ENST00000567399 RNF26Q9BY78 433 aaPredicted RBP17.45■□□□□ 0.38
COMMD4-219ENST00000567399 ABHD16BQ9H3Z7 469 aa17.45■□□□□ 0.38
COMMD4-219ENST00000567399 NRBP1Q9UHY1 535 aa17.45■□□□□ 0.38
COMMD4-219ENST00000567399 MYH6P13533 1939 aa17.45■□□□□ 0.38
COMMD4-219ENST00000567399 MSCO60682 206 aa17.44■□□□□ 0.38
COMMD4-219ENST00000567399 SGPL1O95470 568 aa17.44■□□□□ 0.38
COMMD4-219ENST00000567399 SNAI1O95863 264 aaPredicted RBP17.44■□□□□ 0.38
COMMD4-219ENST00000567399 CYBAP13498 195 aa17.44■□□□□ 0.38
COMMD4-219ENST00000567399 HSD17B4P51659 736 aa17.44■□□□□ 0.38
COMMD4-219ENST00000567399 ACVR2BQ13705 512 aa17.44■□□□□ 0.38
COMMD4-219ENST00000567399 ME3Q16798 604 aa17.44■□□□□ 0.38
COMMD4-219ENST00000567399 PFKFB3Q16875 520 aaPredicted RBP17.44■□□□□ 0.38
COMMD4-219ENST00000567399 EEPD1Q7L9B9 569 aa17.44■□□□□ 0.38
COMMD4-219ENST00000567399 NECAB1Q8N987 351 aa17.44■□□□□ 0.38
COMMD4-219ENST00000567399 U2AF1L4Q8WU68 220 aaKnown RBP17.44■□□□□ 0.38
COMMD4-219ENST00000567399 CCDC12Q8WUD4 166 aaPredicted RBP17.44■□□□□ 0.38
COMMD4-219ENST00000567399 ZSCAN31Q96LW9 406 aaPredicted RBP17.44■□□□□ 0.38
COMMD4-219ENST00000567399 LOC102724159A0A0B4J2E5 919 aa17.43■□□□□ 0.38
COMMD4-219ENST00000567399 POTEFA5A3E0 1075 aa17.43■□□□□ 0.38
COMMD4-219ENST00000567399 SMCO2A6NFE2 343 aa17.43■□□□□ 0.38
COMMD4-219ENST00000567399 OPLAHO14841 1288 aa17.43■□□□□ 0.38
COMMD4-219ENST00000567399 SEPT4O43236 478 aa17.43■□□□□ 0.38
COMMD4-219ENST00000567399 MYCNP04198 464 aaPredicted RBP17.43■□□□□ 0.38
COMMD4-219ENST00000567399 EIF2AK2P19525 551 aaKnown RBP17.43■□□□□ 0.38
COMMD4-219ENST00000567399 PWP2Q15269 919 aaKnown RBP17.43■□□□□ 0.38
COMMD4-219ENST00000567399 NTRK3Q16288 839 aa17.43■□□□□ 0.38
COMMD4-219ENST00000567399 ANO1Q5XXA6 986 aa17.43■□□□□ 0.38
COMMD4-219ENST00000567399 IL27Q8NEV9 243 aa17.43■□□□□ 0.38
COMMD4-219ENST00000567399 FGD4Q96M96 766 aa17.43■□□□□ 0.38
COMMD4-219ENST00000567399 PAK6Q9NQU5 681 aaPredicted RBP17.43■□□□□ 0.38
COMMD4-219ENST00000567399 BARHL2Q9NY43 387 aa17.43■□□□□ 0.38
COMMD4-219ENST00000567399 DDX20Q9UHI6 824 aaKnown RBP17.43■□□□□ 0.38
COMMD4-219ENST00000567399 FAM184BQ9ULE4 1060 aa17.43■□□□□ 0.38
COMMD4-219ENST00000567399 PLXNA1Q9UIW2 1896 aa17.42■□□□□ 0.38
COMMD4-219ENST00000567399 SPDYE3A6NKU9 549 aa17.42■□□□□ 0.38
COMMD4-219ENST00000567399 DEXIO95424 95 aa17.42■□□□□ 0.38
COMMD4-219ENST00000567399 MYCLP12524 364 aaPredicted RBP17.42■□□□□ 0.38
COMMD4-219ENST00000567399 AKR1A1P14550 325 aa17.42■□□□□ 0.38
COMMD4-219ENST00000567399 EN2P19622 333 aaPredicted RBP17.42■□□□□ 0.38
COMMD4-219ENST00000567399 GJA8P48165 433 aa17.42■□□□□ 0.38
COMMD4-219ENST00000567399 ADCY7P51828 1080 aa17.42■□□□□ 0.38
COMMD4-219ENST00000567399 PPP1R18Q6NYC8 613 aa17.42■□□□□ 0.38
COMMD4-219ENST00000567399 USP17L6PQ6QN14 398 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms