RNA–Protein interactions for RNA: ENST00000567365.2

RNF40-211, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-211ENST00000567365 PDRG1Q9NUG6 133 aa14.39□□□□□ -0.11
RNF40-211ENST00000567365 COL20A1Q9P218 1284 aa14.39□□□□□ -0.11
RNF40-211ENST00000567365 NRBP1Q9UHY1 535 aa14.39□□□□□ -0.11
RNF40-211ENST00000567365 MRPL11Q9Y3B7 192 aaKnown RBP14.39□□□□□ -0.11
RNF40-211ENST00000567365 ZNF865P0CJ78 1059 aaPredicted RBP14.38□□□□□ -0.11
RNF40-211ENST00000567365 EN2P19622 333 aaPredicted RBP14.38□□□□□ -0.11
RNF40-211ENST00000567365 CCND3P30281 292 aaPredicted RBP14.38□□□□□ -0.11
RNF40-211ENST00000567365 GJA8P48165 433 aa14.38□□□□□ -0.11
RNF40-211ENST00000567365 METAP2P50579 478 aaKnown RBP eCLIP14.38□□□□□ -0.11
RNF40-211ENST00000567365 HSD17B4P51659 736 aa14.38□□□□□ -0.11
RNF40-211ENST00000567365 FGD1P98174 961 aa14.38□□□□□ -0.11
RNF40-211ENST00000567365 LHX8Q68G74 356 aa14.38□□□□□ -0.11
RNF40-211ENST00000567365 NSMFQ6X4W1 530 aa14.38□□□□□ -0.11
RNF40-211ENST00000567365 RNF207Q6ZRF8 634 aa14.38□□□□□ -0.11
RNF40-211ENST00000567365 RRP36Q96EU6 259 aaKnown RBP14.38□□□□□ -0.11
RNF40-211ENST00000567365 RNF208Q9H0X6 261 aa14.38□□□□□ -0.11
RNF40-211ENST00000567365 HMX1Q9NP08 348 aaPredicted RBP14.38□□□□□ -0.11
RNF40-211ENST00000567365 BIN2Q9UBW5 565 aaPredicted RBP14.38□□□□□ -0.11
RNF40-211ENST00000567365 PCDHA1Q9Y5I3 950 aa14.38□□□□□ -0.11
RNF40-211ENST00000567365 DNAH12Q6ZR08 3092 aa14.37□□□□□ -0.11
RNF40-211ENST00000567365 LOC102724159A0A0B4J2E5 919 aa14.37□□□□□ -0.11
RNF40-211ENST00000567365 MYCP01106 439 aaPredicted RBP14.37□□□□□ -0.11
RNF40-211ENST00000567365 EDNRBP24530 442 aa14.37□□□□□ -0.11
RNF40-211ENST00000567365 TRAF1Q13077 416 aa14.37□□□□□ -0.11
RNF40-211ENST00000567365 PWP2Q15269 919 aaKnown RBP14.37□□□□□ -0.11
RNF40-211ENST00000567365 UBE2Q1Q7Z7E8 422 aa14.37□□□□□ -0.11
RNF40-211ENST00000567365 SYTL5Q8TDW5 730 aaPredicted RBP14.37□□□□□ -0.11
RNF40-211ENST00000567365 BACH2Q9BYV9 841 aa14.37□□□□□ -0.11
RNF40-211ENST00000567365 C22orf23Q9BZE7 217 aa14.37□□□□□ -0.11
RNF40-211ENST00000567365 TPCN1Q9ULQ1 816 aa14.37□□□□□ -0.11
RNF40-211ENST00000567365 CCDC196A0A1B0GTZ2 297 aa14.36□□□□□ -0.11
RNF40-211ENST00000567365 SGPL1O95470 568 aa14.36□□□□□ -0.11
RNF40-211ENST00000567365 AK2P54819 239 aa14.36□□□□□ -0.11
RNF40-211ENST00000567365 HABP4Q5JVS0 413 aaKnown RBP14.36□□□□□ -0.11
RNF40-211ENST00000567365 PRAMEF19Q5SWL8 479 aa14.36□□□□□ -0.11
RNF40-211ENST00000567365 TYW1BQ6NUM6 668 aa14.36□□□□□ -0.11
RNF40-211ENST00000567365 ARMCX2Q7L311 632 aa14.36□□□□□ -0.11
RNF40-211ENST00000567365 MCF2L2Q86YR7 1114 aa14.36□□□□□ -0.11
RNF40-211ENST00000567365 CCDC82Q8N4S0 544 aa14.36□□□□□ -0.11
RNF40-211ENST00000567365 SAMD3Q8N6K7 520 aa14.36□□□□□ -0.11
RNF40-211ENST00000567365 U2AF1L4Q8WU68 220 aaKnown RBP14.36□□□□□ -0.11
RNF40-211ENST00000567365 DEFB118Q96PH6 123 aa14.36□□□□□ -0.11
RNF40-211ENST00000567365 LARP6Q9BRS8 491 aaKnown RBP14.36□□□□□ -0.11
RNF40-211ENST00000567365 TMEM106CQ9BVX2 250 aa14.36□□□□□ -0.11
RNF40-211ENST00000567365 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.36□□□□□ -0.11
RNF40-211ENST00000567365 MAP3K20Q9NYL2 800 aaKnown RBP14.36□□□□□ -0.11
RNF40-211ENST00000567365 DDX49Q9Y6V7 483 aaKnown RBP14.36□□□□□ -0.11
RNF40-211ENST00000567365 hCG_1642624A0A1W2PR95 340 aa14.35□□□□□ -0.11
RNF40-211ENST00000567365 PTPDC1A2A3K4 754 aa14.35□□□□□ -0.11
RNF40-211ENST00000567365 SEPT4O43236 478 aa14.35□□□□□ -0.11
RNF40-211ENST00000567365 IFNAR1P17181 557 aa14.35□□□□□ -0.11
RNF40-211ENST00000567365 CAPN2P17655 700 aa14.35□□□□□ -0.11
RNF40-211ENST00000567365 CALML3P27482 149 aa14.35□□□□□ -0.11
RNF40-211ENST00000567365 MNX1P50219 401 aaPredicted RBP14.35□□□□□ -0.11
RNF40-211ENST00000567365 ALDH5A1P51649 535 aaPredicted RBP14.35□□□□□ -0.11
RNF40-211ENST00000567365 PKN1Q16512 942 aa14.35□□□□□ -0.11
RNF40-211ENST00000567365 DNERQ8NFT8 737 aa14.35□□□□□ -0.11
RNF40-211ENST00000567365 PIBF1Q8WXW3 757 aa14.35□□□□□ -0.11
RNF40-211ENST00000567365 NCOA5Q9HCD5 579 aaKnown RBP14.35□□□□□ -0.11
RNF40-211ENST00000567365 ADD3Q9UEY8 706 aaKnown RBP14.35□□□□□ -0.11
RNF40-211ENST00000567365 OGDHLQ9ULD0 1010 aa14.35□□□□□ -0.11
RNF40-211ENST00000567365 ASB14A6NK59 587 aa14.34□□□□□ -0.11
RNF40-211ENST00000567365 PIK3CDO00329 1044 aa14.34□□□□□ -0.11
RNF40-211ENST00000567365 PRPF3O43395 683 aaKnown RBP14.34□□□□□ -0.11
RNF40-211ENST00000567365 PFKFB2O60825 505 aa14.34□□□□□ -0.11
RNF40-211ENST00000567365 NEK4P51957 841 aa14.34□□□□□ -0.11
RNF40-211ENST00000567365 WWC2Q6AWC2 1192 aa14.34□□□□□ -0.11
RNF40-211ENST00000567365 TBC1D32Q96NH3 1257 aa14.34□□□□□ -0.11
RNF40-211ENST00000567365 TAAR1Q96RJ0 339 aa14.34□□□□□ -0.11
RNF40-211ENST00000567365 ABHD16BQ9H3Z7 469 aa14.34□□□□□ -0.11
RNF40-211ENST00000567365 SEC63Q9UGP8 760 aaKnown RBP14.34□□□□□ -0.11
RNF40-211ENST00000567365 DDX20Q9UHI6 824 aaKnown RBP14.34□□□□□ -0.11
RNF40-211ENST00000567365 V9GY48 417 aaPredicted RBP14.34□□□□□ -0.11
RNF40-211ENST00000567365 FRMPD4Q14CM0 1322 aa14.34□□□□□ -0.11
RNF40-211ENST00000567365 MEIS2O14770 477 aa14.33□□□□□ -0.12
RNF40-211ENST00000567365 ADCY6O43306 1168 aa14.33□□□□□ -0.12
RNF40-211ENST00000567365 LARGE1O95461 756 aa14.33□□□□□ -0.12
RNF40-211ENST00000567365 CCT2P78371 535 aaKnown RBP14.33□□□□□ -0.12
RNF40-211ENST00000567365 SCRN1Q12765 414 aa14.33□□□□□ -0.12
RNF40-211ENST00000567365 ACVR2BQ13705 512 aa14.33□□□□□ -0.12
RNF40-211ENST00000567365 ANKRD1Q15327 319 aa14.33□□□□□ -0.12
RNF40-211ENST00000567365 ME3Q16798 604 aa14.33□□□□□ -0.12
RNF40-211ENST00000567365 PFKFB3Q16875 520 aaPredicted RBP14.33□□□□□ -0.12
RNF40-211ENST00000567365 TAPT1Q6NXT6 567 aa14.33□□□□□ -0.12
RNF40-211ENST00000567365 RNF26Q9BY78 433 aaPredicted RBP14.33□□□□□ -0.12
RNF40-211ENST00000567365 NAP1L2Q9ULW6 460 aaPredicted RBP14.33□□□□□ -0.12
RNF40-211ENST00000567365 RBM47A0AV96 593 aaKnown RBP14.32□□□□□ -0.12
RNF40-211ENST00000567365 STXBP3O00186 592 aa14.32□□□□□ -0.12
RNF40-211ENST00000567365 MSCO60682 206 aa14.32□□□□□ -0.12
RNF40-211ENST00000567365 CTDNEP1O95476 244 aa14.32□□□□□ -0.12
RNF40-211ENST00000567365 CFBP00751 764 aa14.32□□□□□ -0.12
RNF40-211ENST00000567365 ST3GAL1Q11201 340 aa14.32□□□□□ -0.12
RNF40-211ENST00000567365 PPP1R18Q6NYC8 613 aa14.32□□□□□ -0.12
RNF40-211ENST00000567365 TEX2Q8IWB9 1127 aa14.32□□□□□ -0.12
RNF40-211ENST00000567365 GPKOWQ92917 476 aaPredicted RBP eCLIP14.32□□□□□ -0.12
RNF40-211ENST00000567365 PHKBQ93100 1093 aa14.32□□□□□ -0.12
RNF40-211ENST00000567365 BARHL2Q9NY43 387 aa14.32□□□□□ -0.12
RNF40-211ENST00000567365 KIAA1217Q5T5P2 1943 aa14.31□□□□□ -0.12
RNF40-211ENST00000567365 GCOM1H8Y6P7 765 aaPredicted RBP14.31□□□□□ -0.12
RNF40-211ENST00000567365 hCG_1984214I3L0E3 225 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms