RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 CCPG1Q9ULG6 757 aa18.37■□□□□ 0.53
PALB2-205ENST00000567003 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.37■□□□□ 0.53
PALB2-205ENST00000567003 ZEB2O60315 1214 aa18.36■□□□□ 0.53
PALB2-205ENST00000567003 SLC3A2P08195 630 aaKnown RBP18.36■□□□□ 0.53
PALB2-205ENST00000567003 TTLL4Q14679 1199 aa18.36■□□□□ 0.53
PALB2-205ENST00000567003 CCDC96Q2M329 555 aa18.36■□□□□ 0.53
PALB2-205ENST00000567003 TTBK2Q6IQ55 1244 aa18.36■□□□□ 0.53
PALB2-205ENST00000567003 KIAA1211Q6ZU35 1233 aa18.36■□□□□ 0.53
PALB2-205ENST00000567003 FSD1Q9BTV5 496 aa18.36■□□□□ 0.53
PALB2-205ENST00000567003 ALDH8A1Q9H2A2 487 aaPredicted RBP18.36■□□□□ 0.53
PALB2-205ENST00000567003 SLC4A7Q9Y6M7 1214 aa18.36■□□□□ 0.53
PALB2-205ENST00000567003 PRRC2BQ5JSZ5 2229 aaKnown RBP18.35■□□□□ 0.53
PALB2-205ENST00000567003 TSPY2A6NKD2 308 aa18.35■□□□□ 0.53
PALB2-205ENST00000567003 RFXAPO00287 272 aa18.35■□□□□ 0.53
PALB2-205ENST00000567003 SLC16A2P36021 539 aa18.35■□□□□ 0.53
PALB2-205ENST00000567003 TFF2Q03403 129 aa18.35■□□□□ 0.53
PALB2-205ENST00000567003 ZMYM1Q5SVZ6 1142 aa18.35■□□□□ 0.53
PALB2-205ENST00000567003 IQSEC1Q6DN90 963 aa18.35■□□□□ 0.53
PALB2-205ENST00000567003 RCSD1Q6JBY9 416 aa18.35■□□□□ 0.53
PALB2-205ENST00000567003 DEFB128Q7Z7B8 93 aa18.35■□□□□ 0.53
PALB2-205ENST00000567003 PI4K2BQ8TCG2 481 aa18.35■□□□□ 0.53
PALB2-205ENST00000567003 VTA1Q9NP79 307 aa18.35■□□□□ 0.53
PALB2-205ENST00000567003 NFIBO00712 420 aa18.34■□□□□ 0.53
PALB2-205ENST00000567003 PLA2G6O60733 806 aa18.34■□□□□ 0.53
PALB2-205ENST00000567003 MYL3P08590 195 aa18.34■□□□□ 0.53
PALB2-205ENST00000567003 BAATQ14032 418 aaPredicted RBP18.34■□□□□ 0.53
PALB2-205ENST00000567003 CERS4Q9HA82 394 aa18.34■□□□□ 0.53
PALB2-205ENST00000567003 TNKSO95271 1327 aa18.33■□□□□ 0.53
PALB2-205ENST00000567003 RBAK-RBAKDNI3L0D1 243 aa18.33■□□□□ 0.52
PALB2-205ENST00000567003 RANBP6O60518 1105 aaKnown RBP18.33■□□□□ 0.52
PALB2-205ENST00000567003 ATP2A2P16615 1042 aaKnown RBP18.33■□□□□ 0.52
PALB2-205ENST00000567003 ALDH5A1P51649 535 aaPredicted RBP18.33■□□□□ 0.52
PALB2-205ENST00000567003 VPS53Q5VIR6 699 aa18.33■□□□□ 0.52
PALB2-205ENST00000567003 DIEXFQ68CQ4 756 aaKnown RBP18.33■□□□□ 0.52
PALB2-205ENST00000567003 RPUSD2Q8IZ73 545 aaKnown RBP18.33■□□□□ 0.52
PALB2-205ENST00000567003 IL27Q8NEV9 243 aa18.33■□□□□ 0.52
PALB2-205ENST00000567003 MORC4Q8TE76 937 aa18.33■□□□□ 0.52
PALB2-205ENST00000567003 Q9Y3F1 56 aa18.33■□□□□ 0.52
PALB2-205ENST00000567003 PCDHA11Q9Y5I1 949 aa18.33■□□□□ 0.52
PALB2-205ENST00000567003 FRMPD2Q68DX3 1309 aaPredicted RBP18.32■□□□□ 0.52
PALB2-205ENST00000567003 ICAM1P05362 532 aa18.32■□□□□ 0.52
PALB2-205ENST00000567003 LRRFIP1Q32MZ4 808 aaKnown RBP18.32■□□□□ 0.52
PALB2-205ENST00000567003 DUSP28Q4G0W2 176 aa18.32■□□□□ 0.52
PALB2-205ENST00000567003 KRT40Q6A162 431 aa18.32■□□□□ 0.52
PALB2-205ENST00000567003 SLC30A10Q6XR72 485 aa18.32■□□□□ 0.52
PALB2-205ENST00000567003 WDR11Q9BZH6 1224 aa18.32■□□□□ 0.52
PALB2-205ENST00000567003 RANBP17Q9H2T7 1088 aaKnown RBP18.32■□□□□ 0.52
PALB2-205ENST00000567003 SCN10AQ9Y5Y9 1956 aa18.31■□□□□ 0.52
PALB2-205ENST00000567003 TET1Q8NFU7 2136 aa18.31■□□□□ 0.52
PALB2-205ENST00000567003 TTC41PQ6P2S7 1318 aa18.31■□□□□ 0.52
PALB2-205ENST00000567003 PTPDC1A2A3K4 754 aa18.31■□□□□ 0.52
PALB2-205ENST00000567003 EPOPA6NHQ4 379 aa18.31■□□□□ 0.52
PALB2-205ENST00000567003 ARHGEF15O94989 841 aa18.31■□□□□ 0.52
PALB2-205ENST00000567003 CA3P07451 260 aa18.31■□□□□ 0.52
PALB2-205ENST00000567003 KCNQ1P51787 676 aa18.31■□□□□ 0.52
PALB2-205ENST00000567003 PURAQ00577 322 aaKnown RBP18.31■□□□□ 0.52
PALB2-205ENST00000567003 SKIV2LQ15477 1246 aaKnown RBP18.31■□□□□ 0.52
PALB2-205ENST00000567003 FAM47CQ5HY64 1035 aa18.31■□□□□ 0.52
PALB2-205ENST00000567003 SYDE2Q5VT97 1194 aa18.31■□□□□ 0.52
PALB2-205ENST00000567003 OR6J1Q8NGC5 347 aa18.31■□□□□ 0.52
PALB2-205ENST00000567003 COPS5Q92905 334 aa18.31■□□□□ 0.52
PALB2-205ENST00000567003 SEZ6LQ9BYH1 1024 aa18.31■□□□□ 0.52
PALB2-205ENST00000567003 GPCPD1Q9NPB8 672 aa18.31■□□□□ 0.52
PALB2-205ENST00000567003 TANC1Q9C0D5 1861 aa18.31■□□□□ 0.52
PALB2-205ENST00000567003 CALML3P27482 149 aa18.3■□□□□ 0.52
PALB2-205ENST00000567003 NBPF20Q3BBV1 942 aa18.3■□□□□ 0.52
PALB2-205ENST00000567003 DCAF4Q8WV16 495 aa18.3■□□□□ 0.52
PALB2-205ENST00000567003 POLR3EQ9NVU0 708 aa18.3■□□□□ 0.52
PALB2-205ENST00000567003 ERC2O15083 957 aa18.29■□□□□ 0.52
PALB2-205ENST00000567003 TMEM67Q5HYA8 995 aa18.29■□□□□ 0.52
PALB2-205ENST00000567003 PPP4R3BQ5MIZ7 849 aa18.29■□□□□ 0.52
PALB2-205ENST00000567003 CLEC4DQ8WXI8 215 aa18.29■□□□□ 0.52
PALB2-205ENST00000567003 MTG1Q9BT17 334 aaPredicted RBP18.29■□□□□ 0.52
PALB2-205ENST00000567003 ADD3Q9UEY8 706 aaKnown RBP18.29■□□□□ 0.52
PALB2-205ENST00000567003 PTPRSQ13332 1948 aa18.29■□□□□ 0.52
PALB2-205ENST00000567003 BMP1P13497 986 aa18.28■□□□□ 0.52
PALB2-205ENST00000567003 NOVP48745 357 aa18.28■□□□□ 0.52
PALB2-205ENST00000567003 CPT1AP50416 773 aa18.28■□□□□ 0.52
PALB2-205ENST00000567003 RRP12Q5JTH9 1297 aaKnown RBP18.28■□□□□ 0.52
PALB2-205ENST00000567003 SPRED2Q7Z698 418 aa18.28■□□□□ 0.52
PALB2-205ENST00000567003 TMEM47Q9BQJ4 181 aa18.28■□□□□ 0.52
PALB2-205ENST00000567003 TSPYL2Q9H2G4 693 aaPredicted RBP18.28■□□□□ 0.52
PALB2-205ENST00000567003 TOMM22Q9NS69 142 aa18.28■□□□□ 0.52
PALB2-205ENST00000567003 PCDHB15Q9Y5E8 787 aa18.28■□□□□ 0.52
PALB2-205ENST00000567003 MTCH2Q9Y6C9 303 aa18.28■□□□□ 0.52
PALB2-205ENST00000567003 RBM47A0AV96 593 aaKnown RBP18.27■□□□□ 0.52
PALB2-205ENST00000567003 SUPT20HL2P0C7V6 817 aa18.27■□□□□ 0.52
PALB2-205ENST00000567003 CHMP4BP1P59074 171 aa18.27■□□□□ 0.52
PALB2-205ENST00000567003 BTNL9Q6UXG8 535 aa18.27■□□□□ 0.52
PALB2-205ENST00000567003 ANAPC4Q9UJX5 808 aa18.27■□□□□ 0.52
PALB2-205ENST00000567003 TRIP12Q14669 1992 aaPredicted RBP18.27■□□□□ 0.52
PALB2-205ENST00000567003 COL4A4P53420 1690 aaPredicted RBP18.26■□□□□ 0.51
PALB2-205ENST00000567003 ORC4O43929 436 aa18.26■□□□□ 0.51
PALB2-205ENST00000567003 PFKMP08237 780 aa18.26■□□□□ 0.51
PALB2-205ENST00000567003 MX1P20591 662 aa18.26■□□□□ 0.51
PALB2-205ENST00000567003 PDE4DQ08499 809 aa18.26■□□□□ 0.51
PALB2-205ENST00000567003 PPP2R5BQ15173 497 aa18.26■□□□□ 0.51
PALB2-205ENST00000567003 RNF207Q6ZRF8 634 aa18.26■□□□□ 0.51
PALB2-205ENST00000567003 ARNTL2Q8WYA1 636 aa18.26■□□□□ 0.51
PALB2-205ENST00000567003 GPHNQ9NQX3 736 aaPredicted RBP18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms